RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 TMOD3Q9NYL9 352 aa11.72□□□□□ -0.53
ITGB1-217ENST00000494395 ASAP1Q9ULH1 1129 aa11.72□□□□□ -0.53
ITGB1-217ENST00000494395 UBR2Q8IWV8 1755 aa11.72□□□□□ -0.53
ITGB1-217ENST00000494395 C4BP0C0L5 1744 aa11.72□□□□□ -0.53
ITGB1-217ENST00000494395 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
ITGB1-217ENST00000494395 MAP3K5Q99683 1374 aa11.71□□□□□ -0.53
ITGB1-217ENST00000494395 RNMTO43148 476 aaKnown RBP11.71□□□□□ -0.53
ITGB1-217ENST00000494395 PRKCSHP14314 528 aaPredicted RBP11.71□□□□□ -0.53
ITGB1-217ENST00000494395 KCNQ4P56696 695 aa11.71□□□□□ -0.53
ITGB1-217ENST00000494395 SLC15A2Q16348 729 aa11.71□□□□□ -0.53
ITGB1-217ENST00000494395 ZNF827Q17R98 1081 aa11.71□□□□□ -0.53
ITGB1-217ENST00000494395 SMARCC1Q92922 1105 aaPredicted RBP11.71□□□□□ -0.53
ITGB1-217ENST00000494395 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.53
ITGB1-217ENST00000494395 LGR6Q9HBX8 967 aa11.71□□□□□ -0.53
ITGB1-217ENST00000494395 ATG3Q9NT62 314 aa11.71□□□□□ -0.53
ITGB1-217ENST00000494395 UBR3Q6ZT12 1888 aa11.71□□□□□ -0.53
ITGB1-217ENST00000494395 COL24A1Q17RW2 1714 aa11.71□□□□□ -0.54
ITGB1-217ENST00000494395 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
ITGB1-217ENST00000494395 TJP1Q07157 1748 aa11.7□□□□□ -0.54
ITGB1-217ENST00000494395 PPP1R37O75864 691 aa11.7□□□□□ -0.54
ITGB1-217ENST00000494395 GAS2L2Q8NHY3 880 aa11.7□□□□□ -0.54
ITGB1-217ENST00000494395 CCNL1Q9UK58 526 aaPredicted RBP11.7□□□□□ -0.54
ITGB1-217ENST00000494395 TRPC6Q9Y210 931 aa11.7□□□□□ -0.54
ITGB1-217ENST00000494395 IL17REQ8NFR9 667 aa11.69□□□□□ -0.54
ITGB1-217ENST00000494395 SLC4A9Q96Q91 983 aa11.69□□□□□ -0.54
ITGB1-217ENST00000494395 TMEM106CQ9BVX2 250 aa11.69□□□□□ -0.54
ITGB1-217ENST00000494395 PDGFDQ9GZP0 370 aaPredicted RBP11.69□□□□□ -0.54
ITGB1-217ENST00000494395 SLC52A2Q9HAB3 445 aa11.69□□□□□ -0.54
ITGB1-217ENST00000494395 STK32BQ9NY57 414 aa11.69□□□□□ -0.54
ITGB1-217ENST00000494395 KCPQ6ZWJ8 1503 aa11.69□□□□□ -0.54
ITGB1-217ENST00000494395 LOC102724428A0A0B4J2F2 783 aa11.68□□□□□ -0.54
ITGB1-217ENST00000494395 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
ITGB1-217ENST00000494395 SIK1P57059 783 aa11.68□□□□□ -0.54
ITGB1-217ENST00000494395 CABP4P57796 275 aa11.68□□□□□ -0.54
ITGB1-217ENST00000494395 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
ITGB1-217ENST00000494395 MYH14Q7Z406 1995 aaKnown RBP11.68□□□□□ -0.54
ITGB1-217ENST00000494395 ITPK1Q13572 414 aa11.67□□□□□ -0.54
ITGB1-217ENST00000494395 SRCAPQ6ZRS2 3230 aa11.67□□□□□ -0.54
ITGB1-217ENST00000494395 PNPLA7Q6ZV29 1317 aa11.66□□□□□ -0.54
ITGB1-217ENST00000494395 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
ITGB1-217ENST00000494395 LINC00116Q8NCU8 138 aa11.66□□□□□ -0.54
ITGB1-217ENST00000494395 HTATSF1O43719 755 aaKnown RBP11.64□□□□□ -0.55
ITGB1-217ENST00000494395 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
ITGB1-217ENST00000494395 CCDC184Q52MB2 194 aa11.64□□□□□ -0.55
ITGB1-217ENST00000494395 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
ITGB1-217ENST00000494395 WDR70Q9NW82 654 aa11.64□□□□□ -0.55
ITGB1-217ENST00000494395 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
ITGB1-217ENST00000494395 ATP6V1AP38606 617 aa11.63□□□□□ -0.55
ITGB1-217ENST00000494395 SLC39A6Q13433 755 aa11.63□□□□□ -0.55
ITGB1-217ENST00000494395 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
ITGB1-217ENST00000494395 C4AP0C0L4 1744 aa11.63□□□□□ -0.55
ITGB1-217ENST00000494395 PTCD1O75127 700 aaKnown RBP11.62□□□□□ -0.55
ITGB1-217ENST00000494395 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
ITGB1-217ENST00000494395 DCTN1Q14203 1278 aa11.62□□□□□ -0.55
ITGB1-217ENST00000494395 MCM10Q7L590 875 aa11.62□□□□□ -0.55
ITGB1-217ENST00000494395 MS4A4AQ96JQ5 239 aa11.62□□□□□ -0.55
ITGB1-217ENST00000494395 PNNQ9H307 717 aaKnown RBP11.62□□□□□ -0.55
ITGB1-217ENST00000494395 TFCP2L1Q9NZI6 479 aa11.62□□□□□ -0.55
ITGB1-217ENST00000494395 ADAMTS8Q9UP79 889 aa11.62□□□□□ -0.55
ITGB1-217ENST00000494395 CNTNAP4Q9C0A0 1308 aa11.61□□□□□ -0.55
ITGB1-217ENST00000494395 TIE1P35590 1138 aa11.61□□□□□ -0.55
ITGB1-217ENST00000494395 PTGER2P43116 358 aa11.61□□□□□ -0.55
ITGB1-217ENST00000494395 TEFQ10587 303 aa11.61□□□□□ -0.55
ITGB1-217ENST00000494395 COL23A1Q86Y22 540 aaPredicted RBP11.61□□□□□ -0.55
ITGB1-217ENST00000494395 SPON1Q9HCB6 807 aa11.61□□□□□ -0.55
ITGB1-217ENST00000494395 HAX1O00165 279 aa11.6□□□□□ -0.55
ITGB1-217ENST00000494395 ANP32CO43423 234 aa11.6□□□□□ -0.55
ITGB1-217ENST00000494395 ZBTB7AO95365 584 aa11.6□□□□□ -0.55
ITGB1-217ENST00000494395 TMPOP42166 694 aaKnown RBP11.6□□□□□ -0.55
ITGB1-217ENST00000494395 WDR43Q15061 677 aaKnown RBP eCLIP11.6□□□□□ -0.55
ITGB1-217ENST00000494395 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
ITGB1-217ENST00000494395 ZNF790Q6PG37 636 aa11.6□□□□□ -0.55
ITGB1-217ENST00000494395 SLC16A10Q8TF71 515 aa11.6□□□□□ -0.55
ITGB1-217ENST00000494395 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
ITGB1-217ENST00000494395 AK7Q96M32 723 aa11.6□□□□□ -0.55
ITGB1-217ENST00000494395 MTFR1LQ9H019 292 aa11.6□□□□□ -0.55
ITGB1-217ENST00000494395 MAPK8IP3Q9UPT6 1336 aa11.6□□□□□ -0.55
ITGB1-217ENST00000494395 HEG1Q9ULI3 1381 aa11.59□□□□□ -0.55
ITGB1-217ENST00000494395 TTLL13PA6NNM8 815 aa11.59□□□□□ -0.55
ITGB1-217ENST00000494395 NEFMP07197 916 aa11.59□□□□□ -0.55
ITGB1-217ENST00000494395 SSFA2P28290 1259 aa11.59□□□□□ -0.55
ITGB1-217ENST00000494395 MKRN3Q13064 507 aaKnown RBP11.59□□□□□ -0.55
ITGB1-217ENST00000494395 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
ITGB1-217ENST00000494395 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
ITGB1-217ENST00000494395 RUNDC1Q96C34 613 aa11.59□□□□□ -0.55
ITGB1-217ENST00000494395 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
ITGB1-217ENST00000494395 KCNQ3O43525 872 aa11.58□□□□□ -0.56
ITGB1-217ENST00000494395 CRKLP46109 303 aaKnown RBP11.58□□□□□ -0.56
ITGB1-217ENST00000494395 DNAJC10Q8IXB1 793 aa11.58□□□□□ -0.56
ITGB1-217ENST00000494395 FLAD1Q8NFF5 587 aa11.58□□□□□ -0.56
ITGB1-217ENST00000494395 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
ITGB1-217ENST00000494395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.57□□□□□ -0.56
ITGB1-217ENST00000494395 BTBD11A6QL63 1104 aa11.57□□□□□ -0.56
ITGB1-217ENST00000494395 GNPATO15228 680 aa11.57□□□□□ -0.56
ITGB1-217ENST00000494395 GALR2O43603 387 aaPredicted RBP11.57□□□□□ -0.56
ITGB1-217ENST00000494395 RPS6KA4O75676 772 aa11.57□□□□□ -0.56
ITGB1-217ENST00000494395 CYP19A1P11511 503 aaPredicted RBP11.57□□□□□ -0.56
ITGB1-217ENST00000494395 INTS5Q6P9B9 1019 aaKnown RBP11.57□□□□□ -0.56
ITGB1-217ENST00000494395 PNISRQ8TF01 805 aaKnown RBP11.57□□□□□ -0.56
ITGB1-217ENST00000494395 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms