RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 ECM2O94769 699 aaPredicted RBP8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 MVPQ14764 893 aaKnown RBP8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 CCDC30Q5VVM6 783 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 C8orf58Q8NAV2 365 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 CDCA7Q9BWT1 371 aaPredicted RBP8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 SIPA1L3O60292 1781 aaPredicted RBP8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 B4GALNT3Q6L9W6 998 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 CENPQQ7L2Z9 268 aaPredicted RBP8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 TMTC2Q8N394 836 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 STK31Q9BXU1 1019 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 NOB1Q9ULX3 412 aaKnown RBP8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 PCDH11XQ9BZA7 1347 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 PCDH11YQ9BZA8 1340 aa8.45□□□□□ -1.06
FNDC3B-212ENST00000494000 MRC1P22897 1456 aa8.44□□□□□ -1.06
FNDC3B-212ENST00000494000 IL2RBP14784 551 aa8.44□□□□□ -1.06
FNDC3B-212ENST00000494000 PHKG2P15735 406 aa8.44□□□□□ -1.06
FNDC3B-212ENST00000494000 C20orf194Q5TEA3 1177 aa8.44□□□□□ -1.06
FNDC3B-212ENST00000494000 PLCH1Q4KWH8 1693 aa8.44□□□□□ -1.06
FNDC3B-212ENST00000494000 NWD2Q9ULI1 1742 aa8.44□□□□□ -1.06
FNDC3B-212ENST00000494000 MEGF6O75095 1541 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 BTBD11A6QL63 1104 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 PATL2C9JE40 543 aaKnown RBP8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 TRIM27P14373 513 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 GRIPAP1Q4V328 841 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 ZNF662Q6ZS27 426 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 TSPYL6Q8N831 410 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 ZCRB1Q8TBF4 217 aaKnown RBP8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 THRAP3Q9Y2W1 955 aaKnown RBP8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 KAT6BQ8WYB5 2073 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 CARNS1A5YM72 827 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 UBAP1LF5GYI3 381 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 GPATCH11Q8N954 259 aa8.43□□□□□ -1.06
FNDC3B-212ENST00000494000 ERVV-2B6SEH9 535 aa8.42□□□□□ -1.06
FNDC3B-212ENST00000494000 NKX1-1Q15270 411 aaPredicted RBP8.42□□□□□ -1.06
FNDC3B-212ENST00000494000 IPO4Q8TEX9 1081 aaKnown RBP8.42□□□□□ -1.06
FNDC3B-212ENST00000494000 BCL2L13Q9BXK5 485 aa8.42□□□□□ -1.06
FNDC3B-212ENST00000494000 COG6Q9Y2V7 657 aa8.42□□□□□ -1.06
FNDC3B-212ENST00000494000 JCADQ9P266 1359 aa8.42□□□□□ -1.06
FNDC3B-212ENST00000494000 ABCC4O15439 1325 aa8.42□□□□□ -1.06
FNDC3B-212ENST00000494000 PANK1Q8TE04 598 aa8.42□□□□□ -1.06
FNDC3B-212ENST00000494000 SLC52A2Q9HAB3 445 aa8.42□□□□□ -1.06
FNDC3B-212ENST00000494000 EIF4A1P60842 406 aaKnown RBP8.41□□□□□ -1.06
FNDC3B-212ENST00000494000 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
FNDC3B-212ENST00000494000 CERKQ8TCT0 537 aa8.41□□□□□ -1.06
FNDC3B-212ENST00000494000 RWDD1Q9H446 243 aaPredicted RBP8.41□□□□□ -1.06
FNDC3B-212ENST00000494000 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
FNDC3B-212ENST00000494000 SPATA31A6Q5VVP1 1343 aa8.41□□□□□ -1.06
FNDC3B-212ENST00000494000 ZC3H15Q8WU90 426 aaKnown RBP8.41□□□□□ -1.06
FNDC3B-212ENST00000494000 BTG4Q9NY30 223 aa8.41□□□□□ -1.06
FNDC3B-212ENST00000494000 PXDNLA1KZ92 1463 aa8.41□□□□□ -1.06
FNDC3B-212ENST00000494000 HEG1Q9ULI3 1381 aa8.4□□□□□ -1.06
FNDC3B-212ENST00000494000 ELL2O00472 640 aaPredicted RBP8.4□□□□□ -1.06
FNDC3B-212ENST00000494000 INTS3Q68E01 1043 aaKnown RBP8.4□□□□□ -1.06
FNDC3B-212ENST00000494000 NRAPQ86VF7 1730 aa8.4□□□□□ -1.06
FNDC3B-212ENST00000494000 LRP6O75581 1613 aa8.4□□□□□ -1.06
FNDC3B-212ENST00000494000 KDM2BQ8NHM5 1336 aa8.4□□□□□ -1.06
FNDC3B-212ENST00000494000 WNK3Q9BYP7 1800 aa8.4□□□□□ -1.06
FNDC3B-212ENST00000494000 CCT4P50991 539 aaKnown RBP8.4□□□□□ -1.07
FNDC3B-212ENST00000494000 LARP1Q6PKG0 1096 aaKnown RBP8.4□□□□□ -1.07
FNDC3B-212ENST00000494000 ITPRIPQ8IWB1 547 aa8.4□□□□□ -1.07
FNDC3B-212ENST00000494000 STRN4Q9NRL3 753 aa8.4□□□□□ -1.07
FNDC3B-212ENST00000494000 RIPOR2Q9Y4F9 1068 aa8.4□□□□□ -1.07
FNDC3B-212ENST00000494000 KDM6AO15550 1401 aaPredicted RBP8.4□□□□□ -1.07
FNDC3B-212ENST00000494000 TCERG1O14776 1098 aaKnown RBP8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 SLC4A2P04920 1241 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 HDGFL1Q5TGJ6 251 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 DISP2A7MBM2 1401 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 CYP27B1O15528 508 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 RLBP1P12271 317 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 CABP4P57796 275 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 PIP4K2BP78356 416 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 TTC5Q8N0Z6 440 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 TMEM57Q8N5G2 664 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 MIS18AQ9NYP9 233 aa8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 N4BP2Q86UW6 1770 aaPredicted RBP8.39□□□□□ -1.07
FNDC3B-212ENST00000494000 HDAC1Q13547 482 aaPredicted RBP8.38□□□□□ -1.07
FNDC3B-212ENST00000494000 DBF4Q9UBU7 674 aaPredicted RBP8.38□□□□□ -1.07
FNDC3B-212ENST00000494000 SLIT2O94813 1529 aa8.38□□□□□ -1.07
FNDC3B-212ENST00000494000 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
FNDC3B-212ENST00000494000 SHANK3Q9BYB0 1731 aa8.38□□□□□ -1.07
FNDC3B-212ENST00000494000 ZNF790Q6PG37 636 aa8.38□□□□□ -1.07
FNDC3B-212ENST00000494000 ZBTB40Q9NUA8 1239 aa8.38□□□□□ -1.07
FNDC3B-212ENST00000494000 HDAC5Q9UQL6 1122 aa8.38□□□□□ -1.07
FNDC3B-212ENST00000494000 IBTKQ9P2D0 1353 aaPredicted RBP8.38□□□□□ -1.07
FNDC3B-212ENST00000494000 GIGYF1O75420 1035 aaPredicted RBP8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 FOSBP53539 338 aa8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 FBXW7Q969H0 707 aa8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 FMNL2Q96PY5 1086 aa8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 HYPKQ9NX55 129 aa8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 EXOC5O00471 708 aa8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 ZBTB7BO15156 539 aaPredicted RBP8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 GTF2E1P29083 439 aaPredicted RBP8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 BARGINQ6ZT62 677 aa8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 NOL8Q76FK4 1167 aaKnown RBP8.37□□□□□ -1.07
FNDC3B-212ENST00000494000 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.36□□□□□ -1.07
FNDC3B-212ENST00000494000 SNRPA1P09661 255 aaKnown RBP8.36□□□□□ -1.07
FNDC3B-212ENST00000494000 FLIIQ13045 1269 aa8.36□□□□□ -1.07
FNDC3B-212ENST00000494000 KRT24Q2M2I5 525 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms