RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 CAMSAP1Q5T5Y3 1602 aa9.42□□□□□ -0.9
TRA2B-216ENST00000493864 WNT7AO00755 349 aa9.42□□□□□ -0.9
TRA2B-216ENST00000493864 ALG2Q9H553 416 aa9.42□□□□□ -0.9
TRA2B-216ENST00000493864 C1orf115Q9H7X2 142 aa9.42□□□□□ -0.9
TRA2B-216ENST00000493864 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
TRA2B-216ENST00000493864 MRGPRX2Q96LB1 330 aa9.41□□□□□ -0.9
TRA2B-216ENST00000493864 ZC3H13Q5T200 1668 aaKnown RBP9.41□□□□□ -0.9
TRA2B-216ENST00000493864 RPRD2Q5VT52 1461 aaKnown RBP9.4□□□□□ -0.9
TRA2B-216ENST00000493864 NOS1P29475 1434 aa9.4□□□□□ -0.9
TRA2B-216ENST00000493864 ZNF142P52746 1687 aaPredicted RBP9.4□□□□□ -0.9
TRA2B-216ENST00000493864 IDI1Q13907 227 aa9.4□□□□□ -0.9
TRA2B-216ENST00000493864 ARID5BQ14865 1188 aa9.4□□□□□ -0.9
TRA2B-216ENST00000493864 RGL3Q3MIN7 710 aa9.4□□□□□ -0.9
TRA2B-216ENST00000493864 ZNF592Q92610 1267 aa9.4□□□□□ -0.9
TRA2B-216ENST00000493864 L3MBTL2Q969R5 705 aa9.4□□□□□ -0.9
TRA2B-216ENST00000493864 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
TRA2B-216ENST00000493864 UHRF1BP1Q6BDS2 1440 aa9.39□□□□□ -0.91
TRA2B-216ENST00000493864 TRMT44Q8IYL2 757 aaKnown RBP9.39□□□□□ -0.91
TRA2B-216ENST00000493864 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
TRA2B-216ENST00000493864 TLL2Q9Y6L7 1015 aa9.39□□□□□ -0.91
TRA2B-216ENST00000493864 SPHKAPQ2M3C7 1700 aa9.39□□□□□ -0.91
TRA2B-216ENST00000493864 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
TRA2B-216ENST00000493864 UGGT1Q9NYU2 1555 aa9.38□□□□□ -0.91
TRA2B-216ENST00000493864 TRPM2O94759 1503 aa9.38□□□□□ -0.91
TRA2B-216ENST00000493864 TNFRSF10AO00220 468 aa9.38□□□□□ -0.91
TRA2B-216ENST00000493864 PPP1R15AO75807 674 aaPredicted RBP9.38□□□□□ -0.91
TRA2B-216ENST00000493864 MCCD1P59942 119 aaPredicted RBP9.38□□□□□ -0.91
TRA2B-216ENST00000493864 CEP126Q9P2H0 1117 aa9.38□□□□□ -0.91
TRA2B-216ENST00000493864 ERVK-7P63135 1459 aa9.38□□□□□ -0.91
TRA2B-216ENST00000493864 SIAH2O43255 324 aa9.37□□□□□ -0.91
TRA2B-216ENST00000493864 RGS20O76081 388 aa9.37□□□□□ -0.91
TRA2B-216ENST00000493864 VASH1Q7L8A9 365 aaPredicted RBP9.37□□□□□ -0.91
TRA2B-216ENST00000493864 CCDC82Q8N4S0 544 aa9.37□□□□□ -0.91
TRA2B-216ENST00000493864 SLC52A1Q9NWF4 448 aa9.37□□□□□ -0.91
TRA2B-216ENST00000493864 CLTCL1P53675 1640 aa9.37□□□□□ -0.91
TRA2B-216ENST00000493864 SYNMO15061 1565 aa9.37□□□□□ -0.91
TRA2B-216ENST00000493864 CEP170BQ9Y4F5 1589 aaPredicted RBP9.37□□□□□ -0.91
TRA2B-216ENST00000493864 NBPF20Q3BBV1 942 aa9.36□□□□□ -0.91
TRA2B-216ENST00000493864 DCAF11Q8TEB1 546 aa9.36□□□□□ -0.91
TRA2B-216ENST00000493864 CCDC97Q96F63 343 aaPredicted RBP9.36□□□□□ -0.91
TRA2B-216ENST00000493864 ARID3AQ99856 593 aa9.36□□□□□ -0.91
TRA2B-216ENST00000493864 CDV3Q9UKY7 258 aaKnown RBP9.36□□□□□ -0.91
TRA2B-216ENST00000493864 TNRQ92752 1358 aa9.36□□□□□ -0.91
TRA2B-216ENST00000493864 GDF9O60383 454 aa9.35□□□□□ -0.91
TRA2B-216ENST00000493864 GIGYF1O75420 1035 aaPredicted RBP9.35□□□□□ -0.91
TRA2B-216ENST00000493864 POLR1AO95602 1720 aaPredicted RBP9.35□□□□□ -0.91
TRA2B-216ENST00000493864 RAB15P59190 212 aa9.35□□□□□ -0.91
TRA2B-216ENST00000493864 SLFNL1Q499Z3 407 aa9.35□□□□□ -0.91
TRA2B-216ENST00000493864 SPATA31E1Q6ZUB1 1445 aa9.35□□□□□ -0.91
TRA2B-216ENST00000493864 KCTD15Q96SI1 283 aaPredicted RBP9.35□□□□□ -0.91
TRA2B-216ENST00000493864 MAP4K5Q9Y4K4 846 aa9.35□□□□□ -0.91
TRA2B-216ENST00000493864 SPATA31D1Q6ZQQ2 1576 aa9.34□□□□□ -0.91
TRA2B-216ENST00000493864 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
TRA2B-216ENST00000493864 ZNF326Q5BKZ1 582 aaKnown RBP9.34□□□□□ -0.91
TRA2B-216ENST00000493864 CDK15Q96Q40 435 aa9.34□□□□□ -0.91
TRA2B-216ENST00000493864 MYO5BQ9ULV0 1848 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 TTC24A2A3L6 582 aaPredicted RBP9.33□□□□□ -0.92
TRA2B-216ENST00000493864 PIK3CDO00329 1044 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 FSHRP23945 695 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 NBPF8Q3BBV2 869 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 TRIM67Q6ZTA4 783 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 RNF135Q8IUD6 432 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 CYP4X1Q8N118 509 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 MPNDQ8N594 471 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 SNIP1Q8TAD8 396 aaKnown RBP9.33□□□□□ -0.92
TRA2B-216ENST00000493864 UCN2Q96RP3 112 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 SERPINA10Q9UK55 444 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 PIK3C2BO00750 1634 aa9.33□□□□□ -0.92
TRA2B-216ENST00000493864 KIF1BO60333 1816 aa9.32□□□□□ -0.92
TRA2B-216ENST00000493864 UBR1Q8IWV7 1749 aa9.31□□□□□ -0.92
TRA2B-216ENST00000493864 ADH1CP00326 375 aa9.31□□□□□ -0.92
TRA2B-216ENST00000493864 GRM5P41594 1212 aa9.31□□□□□ -0.92
TRA2B-216ENST00000493864 TBC1D9Q6ZT07 1266 aa9.31□□□□□ -0.92
TRA2B-216ENST00000493864 WASF2Q9Y6W5 498 aa9.31□□□□□ -0.92
TRA2B-216ENST00000493864 A2ML1A8K2U0 1454 aa9.31□□□□□ -0.92
TRA2B-216ENST00000493864 RPGRIP1LQ68CZ1 1315 aa9.31□□□□□ -0.92
TRA2B-216ENST00000493864 ESPNB1AK53 854 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 J3QL48 77 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 SKIP12755 728 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 PRR20EP86478 221 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 PRR20CP86479 221 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 PRR20DP86480 221 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 PRR20BP86481 221 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 PRR20AP86496 221 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 INTS6LQ5JSJ4 861 aaKnown RBP9.3□□□□□ -0.92
TRA2B-216ENST00000493864 RNF20Q5VTR2 975 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 PHTF2Q8N3S3 785 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 PPP1R12CQ9BZL4 782 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 TFIP11Q9UBB9 837 aaKnown RBP9.3□□□□□ -0.92
TRA2B-216ENST00000493864 PDZRN3Q9UPQ7 1066 aa9.3□□□□□ -0.92
TRA2B-216ENST00000493864 PALM3A6NDB9 673 aaPredicted RBP9.29□□□□□ -0.92
TRA2B-216ENST00000493864 TOR4AQ9NXH8 423 aa9.29□□□□□ -0.92
TRA2B-216ENST00000493864 TMEM131LA2VDJ0 1609 aa9.29□□□□□ -0.92
TRA2B-216ENST00000493864 ADGRB3O60242 1522 aa9.29□□□□□ -0.92
TRA2B-216ENST00000493864 ADGRF5Q8IZF2 1346 aa9.29□□□□□ -0.92
TRA2B-216ENST00000493864 NEURL4Q96JN8 1562 aa9.29□□□□□ -0.92
TRA2B-216ENST00000493864 NLRP1Q9C000 1473 aa9.28□□□□□ -0.92
TRA2B-216ENST00000493864 NR5A1Q13285 461 aa9.28□□□□□ -0.92
TRA2B-216ENST00000493864 TSGA10IPQ3SY00 556 aa9.28□□□□□ -0.92
TRA2B-216ENST00000493864 SEPT12Q8IYM1 358 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 288.8 ms