RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 ZPR1O75312 459 aa10.58□□□□□ -0.72
SEMA3F-209ENST00000493743 HMOX1P09601 288 aa10.58□□□□□ -0.72
SEMA3F-209ENST00000493743 KCNA3P22001 575 aa10.58□□□□□ -0.72
SEMA3F-209ENST00000493743 LGR6Q9HBX8 967 aa10.58□□□□□ -0.72
SEMA3F-209ENST00000493743 TIAM2Q8IVF5 1701 aa10.58□□□□□ -0.72
SEMA3F-209ENST00000493743 ANKRD31Q8N7Z5 1873 aa10.57□□□□□ -0.72
SEMA3F-209ENST00000493743 COL3A1P02461 1466 aaPredicted RBP10.57□□□□□ -0.72
SEMA3F-209ENST00000493743 COL15A1P39059 1388 aa10.57□□□□□ -0.72
SEMA3F-209ENST00000493743 DICER1Q9UPY3 1922 aaKnown RBP10.57□□□□□ -0.72
SEMA3F-209ENST00000493743 POLRMTO00411 1230 aaKnown RBP10.57□□□□□ -0.72
SEMA3F-209ENST00000493743 DIAPH1O60610 1272 aaKnown RBP10.57□□□□□ -0.72
SEMA3F-209ENST00000493743 CYP19A1P11511 503 aaPredicted RBP10.57□□□□□ -0.72
SEMA3F-209ENST00000493743 TM4SF1P30408 202 aa10.57□□□□□ -0.72
SEMA3F-209ENST00000493743 DALRD3Q5D0E6 543 aaKnown RBP10.57□□□□□ -0.72
SEMA3F-209ENST00000493743 PER1O15534 1290 aaPredicted RBP10.56□□□□□ -0.72
SEMA3F-209ENST00000493743 TOMM70O94826 608 aa10.56□□□□□ -0.72
SEMA3F-209ENST00000493743 SLC39A6Q13433 755 aa10.56□□□□□ -0.72
SEMA3F-209ENST00000493743 MTHFSDQ2M296 383 aaKnown RBP10.56□□□□□ -0.72
SEMA3F-209ENST00000493743 C9orf131Q5VYM1 1079 aa10.56□□□□□ -0.72
SEMA3F-209ENST00000493743 USPL1Q5W0Q7 1092 aa10.56□□□□□ -0.72
SEMA3F-209ENST00000493743 VSIG10Q8N0Z9 540 aa10.56□□□□□ -0.72
SEMA3F-209ENST00000493743 BCORQ6W2J9 1755 aa10.56□□□□□ -0.72
SEMA3F-209ENST00000493743 CHRNA5P30532 468 aa10.55□□□□□ -0.72
SEMA3F-209ENST00000493743 CC2D1BQ5T0F9 858 aaKnown RBP10.55□□□□□ -0.72
SEMA3F-209ENST00000493743 HOMEZQ8IX15 550 aa10.55□□□□□ -0.72
SEMA3F-209ENST00000493743 NMRK2Q9NPI5 230 aa10.55□□□□□ -0.72
SEMA3F-209ENST00000493743 NARFQ9UHQ1 456 aa10.55□□□□□ -0.72
SEMA3F-209ENST00000493743 ZBTB1Q9Y2K1 713 aa10.55□□□□□ -0.72
SEMA3F-209ENST00000493743 COL11A2P13942 1736 aaPredicted RBP10.55□□□□□ -0.72
SEMA3F-209ENST00000493743 ARFGEF2Q9Y6D5 1785 aa10.54□□□□□ -0.72
SEMA3F-209ENST00000493743 NPC1L1Q9UHC9 1359 aa10.54□□□□□ -0.72
SEMA3F-209ENST00000493743 APLP1P51693 650 aa10.54□□□□□ -0.72
SEMA3F-209ENST00000493743 FER1L6Q2WGJ9 1857 aa10.54□□□□□ -0.72
SEMA3F-209ENST00000493743 IFFO2Q5TF58 517 aa10.54□□□□□ -0.72
SEMA3F-209ENST00000493743 KDM2BQ8NHM5 1336 aa10.54□□□□□ -0.72
SEMA3F-209ENST00000493743 CEP350Q5VT06 3117 aa10.53□□□□□ -0.72
SEMA3F-209ENST00000493743 NFIXQ14938 502 aa10.53□□□□□ -0.72
SEMA3F-209ENST00000493743 C16orf71Q8IYS4 520 aaPredicted RBP10.53□□□□□ -0.72
SEMA3F-209ENST00000493743 TTC5Q8N0Z6 440 aa10.53□□□□□ -0.72
SEMA3F-209ENST00000493743 RNF181Q9P0P0 153 aa10.53□□□□□ -0.72
SEMA3F-209ENST00000493743 STARD3NLO95772 234 aa10.52□□□□□ -0.73
SEMA3F-209ENST00000493743 SERPINB2P05120 415 aa10.52□□□□□ -0.73
SEMA3F-209ENST00000493743 RBM46Q8TBY0 533 aaKnown RBP10.52□□□□□ -0.73
SEMA3F-209ENST00000493743 BCL2L12Q9HB09 334 aa10.52□□□□□ -0.73
SEMA3F-209ENST00000493743 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.73
SEMA3F-209ENST00000493743 A0A087WZG4 1122 aa10.51□□□□□ -0.73
SEMA3F-209ENST00000493743 GNAT3A8MTJ3 354 aa10.51□□□□□ -0.73
SEMA3F-209ENST00000493743 U2SURPO15042 1029 aaKnown RBP10.51□□□□□ -0.73
SEMA3F-209ENST00000493743 CANXP27824 592 aaKnown RBP10.51□□□□□ -0.73
SEMA3F-209ENST00000493743 TEFQ10587 303 aa10.51□□□□□ -0.73
SEMA3F-209ENST00000493743 GAS2L2Q8NHY3 880 aa10.51□□□□□ -0.73
SEMA3F-209ENST00000493743 ZC3H4Q9UPT8 1303 aaKnown RBP10.51□□□□□ -0.73
SEMA3F-209ENST00000493743 CARMIL3Q8ND23 1372 aa10.51□□□□□ -0.73
SEMA3F-209ENST00000493743 DLG5Q8TDM6 1919 aa10.5□□□□□ -0.73
SEMA3F-209ENST00000493743 EIF5P55010 431 aaKnown RBP10.5□□□□□ -0.73
SEMA3F-209ENST00000493743 ZNF790Q6PG37 636 aa10.5□□□□□ -0.73
SEMA3F-209ENST00000493743 IL17REQ8NFR9 667 aa10.5□□□□□ -0.73
SEMA3F-209ENST00000493743 ZNF496Q96IT1 587 aaPredicted RBP10.5□□□□□ -0.73
SEMA3F-209ENST00000493743 TEX13AQ9BXU3 409 aaPredicted RBP10.5□□□□□ -0.73
SEMA3F-209ENST00000493743 LAMB4A4D0S4 1761 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 H0YIN7 160 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 RASSF7Q02833 373 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 FSTL1Q12841 308 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 CNGB1Q14028 1251 aaPredicted RBP10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 BICDL1Q6ZP65 573 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 C2CD5Q86YS7 1000 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 TTLL6Q8N841 843 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 BCL11AQ9H165 835 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 CEMIPQ8WUJ3 1361 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 SLX4Q8IY92 1834 aa10.49□□□□□ -0.73
SEMA3F-209ENST00000493743 LMNB1P20700 586 aa10.48□□□□□ -0.73
SEMA3F-209ENST00000493743 IL6STP40189 918 aaPredicted RBP10.48□□□□□ -0.73
SEMA3F-209ENST00000493743 DNAJC5GQ8N7S2 189 aa10.48□□□□□ -0.73
SEMA3F-209ENST00000493743 CFAP53Q96M91 514 aa10.48□□□□□ -0.73
SEMA3F-209ENST00000493743 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
SEMA3F-209ENST00000493743 RRAGCQ9HB90 399 aa10.48□□□□□ -0.73
SEMA3F-209ENST00000493743 TBC1D9BQ66K14 1250 aa10.47□□□□□ -0.73
SEMA3F-209ENST00000493743 NPM2Q86SE8 214 aaKnown RBP10.47□□□□□ -0.73
SEMA3F-209ENST00000493743 PDZRN3Q9UPQ7 1066 aa10.47□□□□□ -0.73
SEMA3F-209ENST00000493743 ZNF330Q9Y3S2 320 aaPredicted RBP10.47□□□□□ -0.73
SEMA3F-209ENST00000493743 GLTPD2A6NH11 291 aa10.46□□□□□ -0.73
SEMA3F-209ENST00000493743 PRKAR2BP31323 418 aa10.46□□□□□ -0.73
SEMA3F-209ENST00000493743 PDE6BP35913 854 aa10.46□□□□□ -0.73
SEMA3F-209ENST00000493743 SMC1BQ8NDV3 1235 aa10.46□□□□□ -0.73
SEMA3F-209ENST00000493743 BRIP1Q9BX63 1249 aa10.46□□□□□ -0.73
SEMA3F-209ENST00000493743 RSPH6AQ9H0K4 717 aa10.46□□□□□ -0.73
SEMA3F-209ENST00000493743 TBC1D2BQ9UPU7 963 aa10.46□□□□□ -0.73
SEMA3F-209ENST00000493743 KDM3BQ7LBC6 1761 aa10.46□□□□□ -0.74
SEMA3F-209ENST00000493743 NUP98P52948 1817 aa10.46□□□□□ -0.74
SEMA3F-209ENST00000493743 BTBD11A6QL63 1104 aa10.45□□□□□ -0.74
SEMA3F-209ENST00000493743 NFKBIEO00221 500 aa10.45□□□□□ -0.74
SEMA3F-209ENST00000493743 A1BGP04217 495 aa10.45□□□□□ -0.74
SEMA3F-209ENST00000493743 PRELPP51888 382 aa10.45□□□□□ -0.74
SEMA3F-209ENST00000493743 PRR5LQ6MZQ0 368 aa10.45□□□□□ -0.74
SEMA3F-209ENST00000493743 ZNF622Q969S3 477 aaKnown RBP eCLIP10.45□□□□□ -0.74
SEMA3F-209ENST00000493743 PHACTR3Q96KR7 559 aa10.45□□□□□ -0.74
SEMA3F-209ENST00000493743 NUDCQ9Y266 331 aa10.45□□□□□ -0.74
SEMA3F-209ENST00000493743 SCN4AP35499 1836 aa10.44□□□□□ -0.74
SEMA3F-209ENST00000493743 NPHP1O15259 732 aa10.44□□□□□ -0.74
SEMA3F-209ENST00000493743 CAMTA2O94983 1202 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms