RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 RNF181Q9P0P0 153 aa16.77■□□□□ 0.28
SAMM50-205ENST00000493621 CYP19A1P11511 503 aaPredicted RBP16.76■□□□□ 0.27
SAMM50-205ENST00000493621 RBM46Q8TBY0 533 aaKnown RBP16.76■□□□□ 0.27
SAMM50-205ENST00000493621 TNRC6CQ9HCJ0 1690 aaKnown RBP16.75■□□□□ 0.27
SAMM50-205ENST00000493621 DNAJC5GQ8N7S2 189 aa16.75■□□□□ 0.27
SAMM50-205ENST00000493621 NRXN2Q9P2S2 1712 aa16.75■□□□□ 0.27
SAMM50-205ENST00000493621 COL15A1P39059 1388 aa16.75■□□□□ 0.27
SAMM50-205ENST00000493621 UBR2Q8IWV8 1755 aa16.74■□□□□ 0.27
SAMM50-205ENST00000493621 DLEC1Q9Y238 1755 aa16.74■□□□□ 0.27
SAMM50-205ENST00000493621 KDM2BQ8NHM5 1336 aa16.74■□□□□ 0.27
SAMM50-205ENST00000493621 NFIXQ14938 502 aa16.74■□□□□ 0.27
SAMM50-205ENST00000493621 CCER1Q8TC90 406 aaPredicted RBP16.74■□□□□ 0.27
SAMM50-205ENST00000493621 NARFQ9UHQ1 456 aa16.74■□□□□ 0.27
SAMM50-205ENST00000493621 ZBTB1Q9Y2K1 713 aa16.74■□□□□ 0.27
SAMM50-205ENST00000493621 CCDC88AQ3V6T2 1871 aa16.73■□□□□ 0.27
SAMM50-205ENST00000493621 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
SAMM50-205ENST00000493621 RRAGCQ9HB90 399 aa16.73■□□□□ 0.27
SAMM50-205ENST00000493621 KIF7Q2M1P5 1343 aa16.72■□□□□ 0.27
SAMM50-205ENST00000493621 RASSF7Q02833 373 aa16.72■□□□□ 0.27
SAMM50-205ENST00000493621 DIAPH1O60610 1272 aaKnown RBP16.71■□□□□ 0.27
SAMM50-205ENST00000493621 HTRA3P83110 453 aa16.71■□□□□ 0.27
SAMM50-205ENST00000493621 BCL2L12Q9HB09 334 aa16.71■□□□□ 0.27
SAMM50-205ENST00000493621 SERPINB2P05120 415 aa16.7■□□□□ 0.26
SAMM50-205ENST00000493621 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
SAMM50-205ENST00000493621 FSTL1Q12841 308 aa16.7■□□□□ 0.26
SAMM50-205ENST00000493621 CC2D1BQ5T0F9 858 aaKnown RBP16.7■□□□□ 0.26
SAMM50-205ENST00000493621 VSIG10Q8N0Z9 540 aa16.7■□□□□ 0.26
SAMM50-205ENST00000493621 TIAM2Q8IVF5 1701 aa16.69■□□□□ 0.26
SAMM50-205ENST00000493621 BICDL1Q6ZP65 573 aa16.68■□□□□ 0.26
SAMM50-205ENST00000493621 TTC5Q8N0Z6 440 aa16.68■□□□□ 0.26
SAMM50-205ENST00000493621 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
SAMM50-205ENST00000493621 CARMIL3Q8ND23 1372 aa16.67■□□□□ 0.26
SAMM50-205ENST00000493621 SIPA1L3O60292 1781 aaPredicted RBP16.67■□□□□ 0.26
SAMM50-205ENST00000493621 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
SAMM50-205ENST00000493621 TTLL6Q8N841 843 aa16.67■□□□□ 0.26
SAMM50-205ENST00000493621 SCN7AQ01118 1682 aa16.66■□□□□ 0.26
SAMM50-205ENST00000493621 H0YIN7 160 aa16.66■□□□□ 0.26
SAMM50-205ENST00000493621 PER1O15534 1290 aaPredicted RBP16.66■□□□□ 0.26
SAMM50-205ENST00000493621 STARD3NLO95772 234 aa16.66■□□□□ 0.26
SAMM50-205ENST00000493621 LMNB1P20700 586 aa16.66■□□□□ 0.26
SAMM50-205ENST00000493621 PRELPP51888 382 aa16.66■□□□□ 0.26
SAMM50-205ENST00000493621 KLRG1Q96E93 195 aa16.66■□□□□ 0.26
SAMM50-205ENST00000493621 ZC3H4Q9UPT8 1303 aaKnown RBP16.66■□□□□ 0.26
SAMM50-205ENST00000493621 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
SAMM50-205ENST00000493621 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
SAMM50-205ENST00000493621 SMC1BQ8NDV3 1235 aa16.65■□□□□ 0.26
SAMM50-205ENST00000493621 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
SAMM50-205ENST00000493621 A0A087WZG4 1122 aa16.64■□□□□ 0.25
SAMM50-205ENST00000493621 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.25
SAMM50-205ENST00000493621 TEFQ10587 303 aa16.64■□□□□ 0.25
SAMM50-205ENST00000493621 TBC1D9BQ66K14 1250 aa16.64■□□□□ 0.25
SAMM50-205ENST00000493621 ZNF496Q96IT1 587 aaPredicted RBP16.64■□□□□ 0.25
SAMM50-205ENST00000493621 ZNF330Q9Y3S2 320 aaPredicted RBP16.64■□□□□ 0.25
SAMM50-205ENST00000493621 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
SAMM50-205ENST00000493621 CACNA1SQ13698 1873 aa16.63■□□□□ 0.25
SAMM50-205ENST00000493621 GLTPD2A6NH11 291 aa16.63■□□□□ 0.25
SAMM50-205ENST00000493621 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
SAMM50-205ENST00000493621 ZNF790Q6PG37 636 aa16.63■□□□□ 0.25
SAMM50-205ENST00000493621 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
SAMM50-205ENST00000493621 HEG1Q9ULI3 1381 aa16.63■□□□□ 0.25
SAMM50-205ENST00000493621 DICER1Q9UPY3 1922 aaKnown RBP16.62■□□□□ 0.25
SAMM50-205ENST00000493621 NFKBIEO00221 500 aa16.62■□□□□ 0.25
SAMM50-205ENST00000493621 VEGFAP15692 232 aaPredicted RBP16.62■□□□□ 0.25
SAMM50-205ENST00000493621 CCDC24Q8N4L8 307 aa16.62■□□□□ 0.25
SAMM50-205ENST00000493621 JMYQ8N9B5 988 aa16.62■□□□□ 0.25
SAMM50-205ENST00000493621 GAS2L2Q8NHY3 880 aa16.62■□□□□ 0.25
SAMM50-205ENST00000493621 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.25
SAMM50-205ENST00000493621 TEX13AQ9BXU3 409 aaPredicted RBP16.62■□□□□ 0.25
SAMM50-205ENST00000493621 TBC1D2BQ9UPU7 963 aa16.62■□□□□ 0.25
SAMM50-205ENST00000493621 FER1L6Q2WGJ9 1857 aa16.61■□□□□ 0.25
SAMM50-205ENST00000493621 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
SAMM50-205ENST00000493621 PDE6BP35913 854 aa16.6■□□□□ 0.25
SAMM50-205ENST00000493621 PRR5LQ6MZQ0 368 aa16.6■□□□□ 0.25
SAMM50-205ENST00000493621 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
SAMM50-205ENST00000493621 BCORQ6W2J9 1755 aa16.59■□□□□ 0.25
SAMM50-205ENST00000493621 C21orf2O43822 256 aa16.59■□□□□ 0.25
SAMM50-205ENST00000493621 IL6STP40189 918 aaPredicted RBP16.59■□□□□ 0.25
SAMM50-205ENST00000493621 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
SAMM50-205ENST00000493621 NPC1L1Q9UHC9 1359 aa16.59■□□□□ 0.25
SAMM50-205ENST00000493621 A1BGP04217 495 aa16.58■□□□□ 0.24
SAMM50-205ENST00000493621 NPM2Q86SE8 214 aaKnown RBP16.58■□□□□ 0.24
SAMM50-205ENST00000493621 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.24
SAMM50-205ENST00000493621 SLX4Q8IY92 1834 aa16.58■□□□□ 0.24
SAMM50-205ENST00000493621 ARFGEF2Q9Y6D5 1785 aa16.57■□□□□ 0.24
SAMM50-205ENST00000493621 NPHP1O15259 732 aa16.57■□□□□ 0.24
SAMM50-205ENST00000493621 COL13A1Q5TAT6 717 aaPredicted RBP16.57■□□□□ 0.24
SAMM50-205ENST00000493621 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
SAMM50-205ENST00000493621 CEMIPQ8WUJ3 1361 aa16.56■□□□□ 0.24
SAMM50-205ENST00000493621 BTBD11A6QL63 1104 aa16.56■□□□□ 0.24
SAMM50-205ENST00000493621 POTECB2RU33 542 aa16.56■□□□□ 0.24
SAMM50-205ENST00000493621 KCNQ3O43525 872 aa16.56■□□□□ 0.24
SAMM50-205ENST00000493621 CAMTA2O94983 1202 aa16.56■□□□□ 0.24
SAMM50-205ENST00000493621 ERFEQ4G0M1 354 aa16.56■□□□□ 0.24
SAMM50-205ENST00000493621 DPY19L2Q6NUT2 758 aa16.56■□□□□ 0.24
SAMM50-205ENST00000493621 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
SAMM50-205ENST00000493621 PHACTR3Q96KR7 559 aa16.56■□□□□ 0.24
SAMM50-205ENST00000493621 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
SAMM50-205ENST00000493621 DZIP3Q86Y13 1208 aaKnown RBP16.55■□□□□ 0.24
SAMM50-205ENST00000493621 PCNTO95613 3336 aa16.55■□□□□ 0.24
SAMM50-205ENST00000493621 PIP4K2AP48426 406 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms