RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 DLEC1Q9Y238 1755 aa17.87■□□□□ 0.45
SNED1-212ENST00000493358 A0A0G2JLW4 131 aa17.87■□□□□ 0.45
SNED1-212ENST00000493358 NEFMP07197 916 aa17.87■□□□□ 0.45
SNED1-212ENST00000493358 FKBP8Q14318 412 aa17.87■□□□□ 0.45
SNED1-212ENST00000493358 NPM2Q86SE8 214 aaKnown RBP17.87■□□□□ 0.45
SNED1-212ENST00000493358 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
SNED1-212ENST00000493358 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
SNED1-212ENST00000493358 ZBTB1Q9Y2K1 713 aa17.87■□□□□ 0.45
SNED1-212ENST00000493358 NRXN2Q9P2S2 1712 aa17.86■□□□□ 0.45
SNED1-212ENST00000493358 USPL1Q5W0Q7 1092 aa17.86■□□□□ 0.45
SNED1-212ENST00000493358 ZNF790Q6PG37 636 aa17.86■□□□□ 0.45
SNED1-212ENST00000493358 TEX13AQ9BXU3 409 aaPredicted RBP17.86■□□□□ 0.45
SNED1-212ENST00000493358 GPBP1L1Q9HC44 474 aaPredicted RBP17.86■□□□□ 0.45
SNED1-212ENST00000493358 NARFQ9UHQ1 456 aa17.86■□□□□ 0.45
SNED1-212ENST00000493358 HEG1Q9ULI3 1381 aa17.86■□□□□ 0.45
SNED1-212ENST00000493358 A0A087WZG4 1122 aa17.85■□□□□ 0.45
SNED1-212ENST00000493358 ADCY9O60503 1353 aa17.85■□□□□ 0.45
SNED1-212ENST00000493358 FCHSD2O94868 740 aa17.85■□□□□ 0.45
SNED1-212ENST00000493358 DPEP1P16444 411 aa17.85■□□□□ 0.45
SNED1-212ENST00000493358 CANXP27824 592 aaKnown RBP17.85■□□□□ 0.45
SNED1-212ENST00000493358 IL17REQ8NFR9 667 aa17.85■□□□□ 0.45
SNED1-212ENST00000493358 FMNL2Q96PY5 1086 aa17.85■□□□□ 0.45
SNED1-212ENST00000493358 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
SNED1-212ENST00000493358 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
SNED1-212ENST00000493358 SENP3-EIF4A1A0A087X0R7 540 aa17.84■□□□□ 0.45
SNED1-212ENST00000493358 DDR1Q08345 913 aa17.84■□□□□ 0.45
SNED1-212ENST00000493358 BTBD11A6QL63 1104 aa17.83■□□□□ 0.44
SNED1-212ENST00000493358 ZNF496Q96IT1 587 aaPredicted RBP17.83■□□□□ 0.44
SNED1-212ENST00000493358 PHACTR3Q96KR7 559 aa17.83■□□□□ 0.44
SNED1-212ENST00000493358 PIM2Q9P1W9 311 aa17.83■□□□□ 0.44
SNED1-212ENST00000493358 ZNF330Q9Y3S2 320 aaPredicted RBP17.83■□□□□ 0.44
SNED1-212ENST00000493358 SBF1O95248 1867 aa17.83■□□□□ 0.44
SNED1-212ENST00000493358 CCDC88AQ3V6T2 1871 aa17.83■□□□□ 0.44
SNED1-212ENST00000493358 LAMB4A4D0S4 1761 aa17.83■□□□□ 0.44
SNED1-212ENST00000493358 POLRMTO00411 1230 aaKnown RBP17.82■□□□□ 0.44
SNED1-212ENST00000493358 ARHGAP27Q6ZUM4 889 aa17.82■□□□□ 0.44
SNED1-212ENST00000493358 ZNF526Q8TF50 670 aaPredicted RBP17.82■□□□□ 0.44
SNED1-212ENST00000493358 CACNA1SQ13698 1873 aa17.82■□□□□ 0.44
SNED1-212ENST00000493358 DALRD3Q5D0E6 543 aaKnown RBP17.81■□□□□ 0.44
SNED1-212ENST00000493358 TM4SF1P30408 202 aa17.8■□□□□ 0.44
SNED1-212ENST00000493358 NFIXQ14938 502 aa17.79■□□□□ 0.44
SNED1-212ENST00000493358 ANKRD31Q8N7Z5 1873 aa17.79■□□□□ 0.44
SNED1-212ENST00000493358 IL6STP40189 918 aaPredicted RBP17.78■□□□□ 0.44
SNED1-212ENST00000493358 EIF5P55010 431 aaKnown RBP17.78■□□□□ 0.44
SNED1-212ENST00000493358 KDM3BQ7LBC6 1761 aa17.78■□□□□ 0.44
SNED1-212ENST00000493358 HTATSF1O43719 755 aaKnown RBP17.77■□□□□ 0.44
SNED1-212ENST00000493358 SERPINB2P05120 415 aa17.77■□□□□ 0.44
SNED1-212ENST00000493358 MCM10Q7L590 875 aa17.77■□□□□ 0.44
SNED1-212ENST00000493358 PNNQ9H307 717 aaKnown RBP17.77■□□□□ 0.44
SNED1-212ENST00000493358 NPHP1O15259 732 aa17.76■□□□□ 0.43
SNED1-212ENST00000493358 CHRNA5P30532 468 aa17.76■□□□□ 0.43
SNED1-212ENST00000493358 BICDL1Q6ZP65 573 aa17.76■□□□□ 0.43
SNED1-212ENST00000493358 MAPK8IP3Q9UPT6 1336 aa17.75■□□□□ 0.43
SNED1-212ENST00000493358 KCNA3P22001 575 aa17.75■□□□□ 0.43
SNED1-212ENST00000493358 BCL2L12Q9HB09 334 aa17.75■□□□□ 0.43
SNED1-212ENST00000493358 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
SNED1-212ENST00000493358 KCNQ3O43525 872 aa17.74■□□□□ 0.43
SNED1-212ENST00000493358 SNRPA1P09661 255 aaKnown RBP17.74■□□□□ 0.43
SNED1-212ENST00000493358 TBC1D2BQ9UPU7 963 aa17.74■□□□□ 0.43
SNED1-212ENST00000493358 COL11A2P13942 1736 aaPredicted RBP17.74■□□□□ 0.43
SNED1-212ENST00000493358 TNRC6CQ9HCJ0 1690 aaKnown RBP17.74■□□□□ 0.43
SNED1-212ENST00000493358 TIAM2Q8IVF5 1701 aa17.73■□□□□ 0.43
SNED1-212ENST00000493358 H0YIN7 160 aa17.73■□□□□ 0.43
SNED1-212ENST00000493358 A1BGP04217 495 aa17.73■□□□□ 0.43
SNED1-212ENST00000493358 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
SNED1-212ENST00000493358 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
SNED1-212ENST00000493358 DICER1Q9UPY3 1922 aaKnown RBP17.72■□□□□ 0.43
SNED1-212ENST00000493358 TAF7Q15545 349 aaPredicted RBP17.72■□□□□ 0.43
SNED1-212ENST00000493358 C9orf131Q5VYM1 1079 aa17.72■□□□□ 0.43
SNED1-212ENST00000493358 DZIP3Q86Y13 1208 aaKnown RBP17.72■□□□□ 0.43
SNED1-212ENST00000493358 C2CD5Q86YS7 1000 aa17.72■□□□□ 0.43
SNED1-212ENST00000493358 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
SNED1-212ENST00000493358 ZNF652Q9Y2D9 606 aa17.72■□□□□ 0.43
SNED1-212ENST00000493358 NUP98P52948 1817 aa17.72■□□□□ 0.43
SNED1-212ENST00000493358 RALBP1Q15311 655 aa17.71■□□□□ 0.43
SNED1-212ENST00000493358 TBC1D9BQ66K14 1250 aa17.71■□□□□ 0.43
SNED1-212ENST00000493358 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
SNED1-212ENST00000493358 SETDB2Q96T68 719 aa17.71■□□□□ 0.43
SNED1-212ENST00000493358 PDE6BP35913 854 aa17.7■□□□□ 0.42
SNED1-212ENST00000493358 ST5P78524 1137 aa17.7■□□□□ 0.42
SNED1-212ENST00000493358 TTLL6Q8N841 843 aa17.7■□□□□ 0.42
SNED1-212ENST00000493358 RNF181Q9P0P0 153 aa17.7■□□□□ 0.42
SNED1-212ENST00000493358 USP16Q9Y5T5 823 aa17.7■□□□□ 0.42
SNED1-212ENST00000493358 FER1L6Q2WGJ9 1857 aa17.69■□□□□ 0.42
SNED1-212ENST00000493358 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
SNED1-212ENST00000493358 CNBD1Q8NA66 436 aa17.69■□□□□ 0.42
SNED1-212ENST00000493358 CAMTA2O94983 1202 aa17.68■□□□□ 0.42
SNED1-212ENST00000493358 KDM2BQ8NHM5 1336 aa17.68■□□□□ 0.42
SNED1-212ENST00000493358 CEP350Q5VT06 3117 aa17.67■□□□□ 0.42
SNED1-212ENST00000493358 PIP4K2AP48426 406 aaPredicted RBP17.67■□□□□ 0.42
SNED1-212ENST00000493358 ZNF622Q969S3 477 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNED1-212ENST00000493358 BRIP1Q9BX63 1249 aa17.67■□□□□ 0.42
SNED1-212ENST00000493358 PRAMEF22A3QJZ6 481 aa17.66■□□□□ 0.42
SNED1-212ENST00000493358 KIF3CO14782 793 aa17.66■□□□□ 0.42
SNED1-212ENST00000493358 PRR5LQ6MZQ0 368 aa17.66■□□□□ 0.42
SNED1-212ENST00000493358 CLEC4GQ6UXB4 293 aa17.66■□□□□ 0.42
SNED1-212ENST00000493358 C16orf71Q8IYS4 520 aaPredicted RBP17.66■□□□□ 0.42
SNED1-212ENST00000493358 SLX4Q8IY92 1834 aa17.65■□□□□ 0.42
SNED1-212ENST00000493358 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
SNED1-212ENST00000493358 PLEKHF1Q96S99 279 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms