RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 LMOD3Q0VAK6 560 aa17.95■□□□□ 0.46
IRF1-210ENST00000493208 ZNF496Q96IT1 587 aaPredicted RBP17.95■□□□□ 0.46
IRF1-210ENST00000493208 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
IRF1-210ENST00000493208 C10orf71Q711Q0 1435 aa17.95■□□□□ 0.46
IRF1-210ENST00000493208 SNRPA1P09661 255 aaKnown RBP17.94■□□□□ 0.46
IRF1-210ENST00000493208 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
IRF1-210ENST00000493208 TAF7Q15545 349 aaPredicted RBP17.94■□□□□ 0.46
IRF1-210ENST00000493208 USPL1Q5W0Q7 1092 aa17.94■□□□□ 0.46
IRF1-210ENST00000493208 ZNF330Q9Y3S2 320 aaPredicted RBP17.94■□□□□ 0.46
IRF1-210ENST00000493208 C4AP0C0L4 1744 aa17.94■□□□□ 0.46
IRF1-210ENST00000493208 MYBBP1AQ9BQG0 1328 aaKnown RBP17.94■□□□□ 0.46
IRF1-210ENST00000493208 NPHP1O15259 732 aa17.93■□□□□ 0.46
IRF1-210ENST00000493208 FKBP8Q14318 412 aa17.93■□□□□ 0.46
IRF1-210ENST00000493208 PIM2Q9P1W9 311 aa17.93■□□□□ 0.46
IRF1-210ENST00000493208 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
IRF1-210ENST00000493208 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
IRF1-210ENST00000493208 MCM10Q7L590 875 aa17.92■□□□□ 0.46
IRF1-210ENST00000493208 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
IRF1-210ENST00000493208 ZNF652Q9Y2D9 606 aa17.92■□□□□ 0.46
IRF1-210ENST00000493208 VIRMAQ69YN4 1812 aaKnown RBP17.91■□□□□ 0.46
IRF1-210ENST00000493208 EIF5P55010 431 aaKnown RBP17.91■□□□□ 0.46
IRF1-210ENST00000493208 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
IRF1-210ENST00000493208 NFE2L2Q16236 605 aa17.91■□□□□ 0.46
IRF1-210ENST00000493208 UBR2Q8IWV8 1755 aa17.91■□□□□ 0.46
IRF1-210ENST00000493208 GIGYF1O75420 1035 aaPredicted RBP17.9■□□□□ 0.46
IRF1-210ENST00000493208 DALRD3Q5D0E6 543 aaKnown RBP17.9■□□□□ 0.46
IRF1-210ENST00000493208 MYH14Q7Z406 1995 aaKnown RBP17.9■□□□□ 0.46
IRF1-210ENST00000493208 PXDNLA1KZ92 1463 aa17.89■□□□□ 0.45
IRF1-210ENST00000493208 POLRMTO00411 1230 aaKnown RBP17.89■□□□□ 0.45
IRF1-210ENST00000493208 TM4SF1P30408 202 aa17.89■□□□□ 0.45
IRF1-210ENST00000493208 A0A0G2JLW4 131 aa17.88■□□□□ 0.45
IRF1-210ENST00000493208 DPEP1P16444 411 aa17.88■□□□□ 0.45
IRF1-210ENST00000493208 RGL2O15211 777 aa17.87■□□□□ 0.45
IRF1-210ENST00000493208 SERPINB2P05120 415 aa17.87■□□□□ 0.45
IRF1-210ENST00000493208 NFIXQ14938 502 aa17.87■□□□□ 0.45
IRF1-210ENST00000493208 SETDB2Q96T68 719 aa17.87■□□□□ 0.45
IRF1-210ENST00000493208 GPBP1L1Q9HC44 474 aaPredicted RBP17.87■□□□□ 0.45
IRF1-210ENST00000493208 UTRNP46939 3433 aa17.86■□□□□ 0.45
IRF1-210ENST00000493208 DDR1Q08345 913 aa17.86■□□□□ 0.45
IRF1-210ENST00000493208 CLEC4GQ6UXB4 293 aa17.86■□□□□ 0.45
IRF1-210ENST00000493208 ARHGAP27Q6ZUM4 889 aa17.86■□□□□ 0.45
IRF1-210ENST00000493208 DZIP3Q86Y13 1208 aaKnown RBP17.86■□□□□ 0.45
IRF1-210ENST00000493208 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
IRF1-210ENST00000493208 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
IRF1-210ENST00000493208 SIPA1L3O60292 1781 aaPredicted RBP17.86■□□□□ 0.45
IRF1-210ENST00000493208 KIF13BQ9NQT8 1826 aa17.86■□□□□ 0.45
IRF1-210ENST00000493208 H0YIN7 160 aa17.85■□□□□ 0.45
IRF1-210ENST00000493208 PDE6BP35913 854 aa17.85■□□□□ 0.45
IRF1-210ENST00000493208 ST5P78524 1137 aa17.85■□□□□ 0.45
IRF1-210ENST00000493208 DCTN1Q14203 1278 aa17.85■□□□□ 0.45
IRF1-210ENST00000493208 BABAM1Q9NWV8 329 aa17.85■□□□□ 0.45
IRF1-210ENST00000493208 WWC3Q9ULE0 1092 aa17.85■□□□□ 0.45
IRF1-210ENST00000493208 A1BGP04217 495 aa17.84■□□□□ 0.45
IRF1-210ENST00000493208 BICDL1Q6ZP65 573 aa17.84■□□□□ 0.45
IRF1-210ENST00000493208 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
IRF1-210ENST00000493208 RIPK4P57078 832 aa17.83■□□□□ 0.44
IRF1-210ENST00000493208 CNBD1Q8NA66 436 aa17.82■□□□□ 0.44
IRF1-210ENST00000493208 TSPYL4Q9UJ04 414 aa17.82■□□□□ 0.44
IRF1-210ENST00000493208 USP16Q9Y5T5 823 aa17.82■□□□□ 0.44
IRF1-210ENST00000493208 ATP10DQ9P241 1426 aa17.81■□□□□ 0.44
IRF1-210ENST00000493208 KCNQ3O43525 872 aa17.81■□□□□ 0.44
IRF1-210ENST00000493208 TTLL6Q8N841 843 aa17.81■□□□□ 0.44
IRF1-210ENST00000493208 BRIP1Q9BX63 1249 aa17.81■□□□□ 0.44
IRF1-210ENST00000493208 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
IRF1-210ENST00000493208 KIF6Q6ZMV9 814 aa17.8■□□□□ 0.44
IRF1-210ENST00000493208 C2CD5Q86YS7 1000 aa17.8■□□□□ 0.44
IRF1-210ENST00000493208 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
IRF1-210ENST00000493208 GTF2E1P29083 439 aaPredicted RBP17.79■□□□□ 0.44
IRF1-210ENST00000493208 C1QTNF8P60827 252 aa17.79■□□□□ 0.44
IRF1-210ENST00000493208 CALD1Q05682 793 aaKnown RBP17.79■□□□□ 0.44
IRF1-210ENST00000493208 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
IRF1-210ENST00000493208 TPTE2Q6XPS3 522 aa17.79■□□□□ 0.44
IRF1-210ENST00000493208 NBPF5PQ86XG9 351 aaPredicted RBP17.79■□□□□ 0.44
IRF1-210ENST00000493208 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
IRF1-210ENST00000493208 CAMTA2O94983 1202 aa17.78■□□□□ 0.44
IRF1-210ENST00000493208 TMPOP42166 694 aaKnown RBP17.78■□□□□ 0.44
IRF1-210ENST00000493208 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
IRF1-210ENST00000493208 PRKRIP1Q9H875 184 aaPredicted RBP17.78■□□□□ 0.44
IRF1-210ENST00000493208 GOLGB1Q14789 3259 aaKnown RBP17.78■□□□□ 0.44
IRF1-210ENST00000493208 SCN7AQ01118 1682 aa17.77■□□□□ 0.44
IRF1-210ENST00000493208 KCNA3P22001 575 aa17.77■□□□□ 0.44
IRF1-210ENST00000493208 CHRNA5P30532 468 aa17.77■□□□□ 0.44
IRF1-210ENST00000493208 EIF4A1P60842 406 aaKnown RBP17.77■□□□□ 0.44
IRF1-210ENST00000493208 NYXQ9GZU5 481 aa17.77■□□□□ 0.44
IRF1-210ENST00000493208 MIS18AQ9NYP9 233 aa17.77■□□□□ 0.44
IRF1-210ENST00000493208 ADCY9O60503 1353 aa17.77■□□□□ 0.43
IRF1-210ENST00000493208 N4BP2Q86UW6 1770 aaPredicted RBP17.76■□□□□ 0.43
IRF1-210ENST00000493208 ZC3H4Q9UPT8 1303 aaKnown RBP17.76■□□□□ 0.43
IRF1-210ENST00000493208 CNKSR1Q969H4 720 aa17.76■□□□□ 0.43
IRF1-210ENST00000493208 ZNF622Q969S3 477 aaKnown RBP eCLIP17.76■□□□□ 0.43
IRF1-210ENST00000493208 CHMP4AQ9BY43 222 aa17.76■□□□□ 0.43
IRF1-210ENST00000493208 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
IRF1-210ENST00000493208 ERVV-1B6SEH8 477 aa17.75■□□□□ 0.43
IRF1-210ENST00000493208 ZNF526Q8TF50 670 aaPredicted RBP17.75■□□□□ 0.43
IRF1-210ENST00000493208 NIP7Q9Y221 180 aaKnown RBP eCLIP17.75■□□□□ 0.43
IRF1-210ENST00000493208 NEUROD2Q15784 382 aa17.74■□□□□ 0.43
IRF1-210ENST00000493208 PRR5LQ6MZQ0 368 aa17.74■□□□□ 0.43
IRF1-210ENST00000493208 NRXN2Q9P2S2 1712 aa17.73■□□□□ 0.43
IRF1-210ENST00000493208 PRAMEF22A3QJZ6 481 aa17.73■□□□□ 0.43
IRF1-210ENST00000493208 C9orf131Q5VYM1 1079 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms