RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 CNGB1Q14028 1251 aaPredicted RBP30.47■■■□□ 2.47
HMG20B-214ENST00000493191 ZBTB1Q9Y2K1 713 aa30.47■■■□□ 2.47
HMG20B-214ENST00000493191 NARFQ9UHQ1 456 aa30.46■■■□□ 2.47
HMG20B-214ENST00000493191 TOMM70O94826 608 aa30.45■■■□□ 2.47
HMG20B-214ENST00000493191 COL15A1P39059 1388 aa30.44■■■□□ 2.46
HMG20B-214ENST00000493191 NFIXQ14938 502 aa30.44■■■□□ 2.46
HMG20B-214ENST00000493191 VSIG10Q8N0Z9 540 aa30.43■■■□□ 2.46
HMG20B-214ENST00000493191 AFDNP55196 1824 aaKnown RBP30.41■■■□□ 2.46
HMG20B-214ENST00000493191 CANXP27824 592 aaKnown RBP30.41■■■□□ 2.46
HMG20B-214ENST00000493191 BCL2L12Q9HB09 334 aa30.41■■■□□ 2.46
HMG20B-214ENST00000493191 U2SURPO15042 1029 aaKnown RBP30.4■■■□□ 2.46
HMG20B-214ENST00000493191 RNF181Q9P0P0 153 aa30.4■■■□□ 2.46
HMG20B-214ENST00000493191 IFFO2Q5TF58 517 aa30.39■■■□□ 2.46
HMG20B-214ENST00000493191 TTC5Q8N0Z6 440 aa30.39■■■□□ 2.46
HMG20B-214ENST00000493191 APLP1P51693 650 aa30.38■■■□□ 2.45
HMG20B-214ENST00000493191 UBR2Q8IWV8 1755 aa30.38■■■□□ 2.45
HMG20B-214ENST00000493191 SERPINB2P05120 415 aa30.37■■■□□ 2.45
HMG20B-214ENST00000493191 SBF1O95248 1867 aa30.37■■■□□ 2.45
HMG20B-214ENST00000493191 COL3A1P02461 1466 aaPredicted RBP30.37■■■□□ 2.45
HMG20B-214ENST00000493191 STARD3NLO95772 234 aa30.36■■■□□ 2.45
HMG20B-214ENST00000493191 IL17REQ8NFR9 667 aa30.36■■■□□ 2.45
HMG20B-214ENST00000493191 NRXN2Q9P2S2 1712 aa30.34■■■□□ 2.45
HMG20B-214ENST00000493191 NPC1L1Q9UHC9 1359 aa30.34■■■□□ 2.45
HMG20B-214ENST00000493191 GNAT3A8MTJ3 354 aa30.34■■■□□ 2.45
HMG20B-214ENST00000493191 TEFQ10587 303 aa30.34■■■□□ 2.45
HMG20B-214ENST00000493191 BICDL1Q6ZP65 573 aa30.34■■■□□ 2.45
HMG20B-214ENST00000493191 C16orf71Q8IYS4 520 aaPredicted RBP30.34■■■□□ 2.45
HMG20B-214ENST00000493191 ZNF496Q96IT1 587 aaPredicted RBP30.34■■■□□ 2.45
HMG20B-214ENST00000493191 KDM2BQ8NHM5 1336 aa30.33■■■□□ 2.45
HMG20B-214ENST00000493191 EIF5P55010 431 aaKnown RBP30.33■■■□□ 2.45
HMG20B-214ENST00000493191 GAS2L2Q8NHY3 880 aa30.33■■■□□ 2.45
HMG20B-214ENST00000493191 RASSF7Q02833 373 aa30.32■■■□□ 2.44
HMG20B-214ENST00000493191 ZNF790Q6PG37 636 aa30.32■■■□□ 2.44
HMG20B-214ENST00000493191 RBM46Q8TBY0 533 aaKnown RBP30.32■■■□□ 2.44
HMG20B-214ENST00000493191 RRAGCQ9HB90 399 aa30.31■■■□□ 2.44
HMG20B-214ENST00000493191 C2CD5Q86YS7 1000 aa30.3■■■□□ 2.44
HMG20B-214ENST00000493191 HEG1Q9ULI3 1381 aa30.29■■■□□ 2.44
HMG20B-214ENST00000493191 A0A087WZG4 1122 aa30.29■■■□□ 2.44
HMG20B-214ENST00000493191 ZNF330Q9Y3S2 320 aaPredicted RBP30.29■■■□□ 2.44
HMG20B-214ENST00000493191 CARMIL3Q8ND23 1372 aa30.28■■■□□ 2.44
HMG20B-214ENST00000493191 DNAJC5GQ8N7S2 189 aa30.28■■■□□ 2.44
HMG20B-214ENST00000493191 TTLL6Q8N841 843 aa30.28■■■□□ 2.44
HMG20B-214ENST00000493191 H0YIN7 160 aa30.27■■■□□ 2.44
HMG20B-214ENST00000493191 TBC1D9BQ66K14 1250 aa30.27■■■□□ 2.44
HMG20B-214ENST00000493191 TEX13AQ9BXU3 409 aaPredicted RBP30.27■■■□□ 2.44
HMG20B-214ENST00000493191 TBC1D2BQ9UPU7 963 aa30.27■■■□□ 2.44
HMG20B-214ENST00000493191 SIPA1L3O60292 1781 aaPredicted RBP30.26■■■□□ 2.44
HMG20B-214ENST00000493191 DLEC1Q9Y238 1755 aa30.26■■■□□ 2.44
HMG20B-214ENST00000493191 PHACTR3Q96KR7 559 aa30.26■■■□□ 2.43
HMG20B-214ENST00000493191 PRELPP51888 382 aa30.24■■■□□ 2.43
HMG20B-214ENST00000493191 FMNL2Q96PY5 1086 aa30.24■■■□□ 2.43
HMG20B-214ENST00000493191 KCNQ3O43525 872 aa30.23■■■□□ 2.43
HMG20B-214ENST00000493191 A1BGP04217 495 aa30.23■■■□□ 2.43
HMG20B-214ENST00000493191 LMNB1P20700 586 aa30.23■■■□□ 2.43
HMG20B-214ENST00000493191 PRKAR2BP31323 418 aa30.23■■■□□ 2.43
HMG20B-214ENST00000493191 FSTL1Q12841 308 aa30.23■■■□□ 2.43
HMG20B-214ENST00000493191 HTRA3P83110 453 aa30.22■■■□□ 2.43
HMG20B-214ENST00000493191 CCDC24Q8N4L8 307 aa30.22■■■□□ 2.43
HMG20B-214ENST00000493191 CCDC88AQ3V6T2 1871 aa30.21■■■□□ 2.43
HMG20B-214ENST00000493191 TNRC6CQ9HCJ0 1690 aaKnown RBP30.21■■■□□ 2.43
HMG20B-214ENST00000493191 CEMIPQ8WUJ3 1361 aa30.21■■■□□ 2.43
HMG20B-214ENST00000493191 BTBD11A6QL63 1104 aa30.21■■■□□ 2.43
HMG20B-214ENST00000493191 IL6STP40189 918 aaPredicted RBP30.21■■■□□ 2.43
HMG20B-214ENST00000493191 CFAP53Q96M91 514 aa30.21■■■□□ 2.43
HMG20B-214ENST00000493191 RSPH6AQ9H0K4 717 aa30.21■■■□□ 2.43
HMG20B-214ENST00000493191 WDR90Q96KV7 1748 aa30.21■■■□□ 2.43
HMG20B-214ENST00000493191 ZNF622Q969S3 477 aaKnown RBP eCLIP30.2■■■□□ 2.43
HMG20B-214ENST00000493191 ZC3H4Q9UPT8 1303 aaKnown RBP30.2■■■□□ 2.42
HMG20B-214ENST00000493191 ANKRD31Q8N7Z5 1873 aa30.19■■■□□ 2.42
HMG20B-214ENST00000493191 SCN7AQ01118 1682 aa30.18■■■□□ 2.42
HMG20B-214ENST00000493191 PRR5LQ6MZQ0 368 aa30.18■■■□□ 2.42
HMG20B-214ENST00000493191 NPM2Q86SE8 214 aaKnown RBP30.18■■■□□ 2.42
HMG20B-214ENST00000493191 BRIP1Q9BX63 1249 aa30.18■■■□□ 2.42
HMG20B-214ENST00000493191 NFKBIEO00221 500 aa30.17■■■□□ 2.42
HMG20B-214ENST00000493191 PDE6BP35913 854 aa30.17■■■□□ 2.42
HMG20B-214ENST00000493191 ZNF219Q9P2Y4 722 aaPredicted RBP30.17■■■□□ 2.42
HMG20B-214ENST00000493191 GLTPD2A6NH11 291 aa30.16■■■□□ 2.42
HMG20B-214ENST00000493191 CAMTA2O94983 1202 aa30.15■■■□□ 2.42
HMG20B-214ENST00000493191 SETDB2Q96T68 719 aa30.15■■■□□ 2.42
HMG20B-214ENST00000493191 NUDCQ9Y266 331 aa30.15■■■□□ 2.42
HMG20B-214ENST00000493191 PIP4K2AP48426 406 aaPredicted RBP30.14■■■□□ 2.42
HMG20B-214ENST00000493191 SMC1BQ8NDV3 1235 aa30.14■■■□□ 2.42
HMG20B-214ENST00000493191 PDZRN3Q9UPQ7 1066 aa30.14■■■□□ 2.42
HMG20B-214ENST00000493191 USP16Q9Y5T5 823 aa30.14■■■□□ 2.42
HMG20B-214ENST00000493191 NPHP1O15259 732 aa30.13■■■□□ 2.41
HMG20B-214ENST00000493191 C21orf2O43822 256 aa30.13■■■□□ 2.41
HMG20B-214ENST00000493191 U2AF1L5P0DN76 240 aaPredicted RBP30.13■■■□□ 2.41
HMG20B-214ENST00000493191 VEGFAP15692 232 aaPredicted RBP30.13■■■□□ 2.41
HMG20B-214ENST00000493191 U2AF1Q01081 240 aaKnown RBP eCLIP30.13■■■□□ 2.41
HMG20B-214ENST00000493191 PRAMEF22A3QJZ6 481 aa30.12■■■□□ 2.41
HMG20B-214ENST00000493191 MCM10Q7L590 875 aa30.12■■■□□ 2.41
HMG20B-214ENST00000493191 DZIP3Q86Y13 1208 aaKnown RBP30.12■■■□□ 2.41
HMG20B-214ENST00000493191 CNBD1Q8NA66 436 aa30.12■■■□□ 2.41
HMG20B-214ENST00000493191 KLRG1Q96E93 195 aa30.12■■■□□ 2.41
HMG20B-214ENST00000493191 COL11A2P13942 1736 aaPredicted RBP30.11■■■□□ 2.41
HMG20B-214ENST00000493191 TIAM2Q8IVF5 1701 aa30.11■■■□□ 2.41
HMG20B-214ENST00000493191 PPP2R1AP30153 589 aa30.11■■■□□ 2.41
HMG20B-214ENST00000493191 RTF1Q92541 710 aaKnown RBP30.11■■■□□ 2.41
HMG20B-214ENST00000493191 ST5P78524 1137 aa30.08■■■□□ 2.41
HMG20B-214ENST00000493191 SNRPA1P09661 255 aaKnown RBP30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms