RNA–Protein interactions for RNA: ENST00000493156.6

RFC2-210, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-210ENST00000493156 U2AF1Q01081 240 aaKnown RBP eCLIP26.28■■□□□ 1.8
RFC2-210ENST00000493156 ZNF496Q96IT1 587 aaPredicted RBP26.28■■□□□ 1.8
RFC2-210ENST00000493156 TM4SF1P30408 202 aa26.27■■□□□ 1.8
RFC2-210ENST00000493156 USPL1Q5W0Q7 1092 aa26.27■■□□□ 1.8
RFC2-210ENST00000493156 NARFQ9UHQ1 456 aa26.27■■□□□ 1.8
RFC2-210ENST00000493156 ATP10DQ9P241 1426 aa26.27■■□□□ 1.8
RFC2-210ENST00000493156 NRXN2Q9P2S2 1712 aa26.27■■□□□ 1.8
RFC2-210ENST00000493156 ZPR1O75312 459 aa26.26■■□□□ 1.79
RFC2-210ENST00000493156 A0A0G2JLW4 131 aa26.25■■□□□ 1.79
RFC2-210ENST00000493156 POLRMTO00411 1230 aaKnown RBP26.25■■□□□ 1.79
RFC2-210ENST00000493156 STARD3NLO95772 234 aa26.25■■□□□ 1.79
RFC2-210ENST00000493156 ARFGEF1Q9Y6D6 1849 aa26.24■■□□□ 1.79
RFC2-210ENST00000493156 DPEP1P16444 411 aa26.24■■□□□ 1.79
RFC2-210ENST00000493156 SCN7AQ01118 1682 aa26.24■■□□□ 1.79
RFC2-210ENST00000493156 AFDNP55196 1824 aaKnown RBP26.23■■□□□ 1.79
RFC2-210ENST00000493156 TEX13AQ9BXU3 409 aaPredicted RBP26.23■■□□□ 1.79
RFC2-210ENST00000493156 KCNA3P22001 575 aa26.22■■□□□ 1.79
RFC2-210ENST00000493156 EIF5P55010 431 aaKnown RBP26.22■■□□□ 1.79
RFC2-210ENST00000493156 C1QTNF8P60827 252 aa26.22■■□□□ 1.79
RFC2-210ENST00000493156 FMNL2Q96PY5 1086 aa26.22■■□□□ 1.79
RFC2-210ENST00000493156 BCL2L12Q9HB09 334 aa26.22■■□□□ 1.79
RFC2-210ENST00000493156 GIGYF1O75420 1035 aaPredicted RBP26.21■■□□□ 1.79
RFC2-210ENST00000493156 CANXP27824 592 aaKnown RBP26.2■■□□□ 1.78
RFC2-210ENST00000493156 NFIXQ14938 502 aa26.2■■□□□ 1.78
RFC2-210ENST00000493156 BCS1LQ9Y276 419 aa26.2■■□□□ 1.78
RFC2-210ENST00000493156 BTBD11A6QL63 1104 aa26.19■■□□□ 1.78
RFC2-210ENST00000493156 HTATSF1O43719 755 aaKnown RBP26.19■■□□□ 1.78
RFC2-210ENST00000493156 KCNQ3O43525 872 aa26.18■■□□□ 1.78
RFC2-210ENST00000493156 RTF1Q92541 710 aaKnown RBP26.18■■□□□ 1.78
RFC2-210ENST00000493156 A0A087WZG4 1122 aa26.17■■□□□ 1.78
RFC2-210ENST00000493156 MCM10Q7L590 875 aa26.17■■□□□ 1.78
RFC2-210ENST00000493156 DLEC1Q9Y238 1755 aa26.17■■□□□ 1.78
RFC2-210ENST00000493156 DLG5Q8TDM6 1919 aa26.16■■□□□ 1.78
RFC2-210ENST00000493156 IL6STP40189 918 aaPredicted RBP26.16■■□□□ 1.78
RFC2-210ENST00000493156 BCORQ6W2J9 1755 aa26.15■■□□□ 1.78
RFC2-210ENST00000493156 PIM2Q9P1W9 311 aa26.15■■□□□ 1.78
RFC2-210ENST00000493156 SERPINB2P05120 415 aa26.12■■□□□ 1.77
RFC2-210ENST00000493156 CHRNA5P30532 468 aa26.12■■□□□ 1.77
RFC2-210ENST00000493156 DCTN1Q14203 1278 aa26.12■■□□□ 1.77
RFC2-210ENST00000493156 PLEKHF1Q96S99 279 aa26.12■■□□□ 1.77
RFC2-210ENST00000493156 GPBP1L1Q9HC44 474 aaPredicted RBP26.12■■□□□ 1.77
RFC2-210ENST00000493156 KDM3BQ7LBC6 1761 aa26.11■■□□□ 1.77
RFC2-210ENST00000493156 A1BGP04217 495 aa26.11■■□□□ 1.77
RFC2-210ENST00000493156 DALRD3Q5D0E6 543 aaKnown RBP26.11■■□□□ 1.77
RFC2-210ENST00000493156 LAMB4A4D0S4 1761 aa26.1■■□□□ 1.77
RFC2-210ENST00000493156 ARHGAP27Q6ZUM4 889 aa26.1■■□□□ 1.77
RFC2-210ENST00000493156 CARMIL3Q8ND23 1372 aa26.09■■□□□ 1.77
RFC2-210ENST00000493156 USP16Q9Y5T5 823 aa26.09■■□□□ 1.77
RFC2-210ENST00000493156 ANKRD31Q8N7Z5 1873 aa26.08■■□□□ 1.77
RFC2-210ENST00000493156 NEFMP07197 916 aa26.08■■□□□ 1.77
RFC2-210ENST00000493156 SNRPA1P09661 255 aaKnown RBP26.08■■□□□ 1.77
RFC2-210ENST00000493156 RALBP1Q15311 655 aa26.08■■□□□ 1.77
RFC2-210ENST00000493156 TBC1D9BQ66K14 1250 aa26.08■■□□□ 1.77
RFC2-210ENST00000493156 TBC1D2BQ9UPU7 963 aa26.08■■□□□ 1.77
RFC2-210ENST00000493156 PRAMEF22A3QJZ6 481 aa26.07■■□□□ 1.76
RFC2-210ENST00000493156 CAMTA2O94983 1202 aa26.07■■□□□ 1.76
RFC2-210ENST00000493156 TAF7Q15545 349 aaPredicted RBP26.07■■□□□ 1.76
RFC2-210ENST00000493156 ZNF330Q9Y3S2 320 aaPredicted RBP26.07■■□□□ 1.76
RFC2-210ENST00000493156 ZNF526Q8TF50 670 aaPredicted RBP26.06■■□□□ 1.76
RFC2-210ENST00000493156 SENP3-EIF4A1A0A087X0R7 540 aa26.05■■□□□ 1.76
RFC2-210ENST00000493156 NFE2L2Q16236 605 aa26.05■■□□□ 1.76
RFC2-210ENST00000493156 BICDL1Q6ZP65 573 aa26.05■■□□□ 1.76
RFC2-210ENST00000493156 PNNQ9H307 717 aaKnown RBP26.04■■□□□ 1.76
RFC2-210ENST00000493156 NPM2Q86SE8 214 aaKnown RBP26.03■■□□□ 1.76
RFC2-210ENST00000493156 DZIP3Q86Y13 1208 aaKnown RBP26.03■■□□□ 1.76
RFC2-210ENST00000493156 COL11A2P13942 1736 aaPredicted RBP26.02■■□□□ 1.76
RFC2-210ENST00000493156 SBF1O95248 1867 aa26.02■■□□□ 1.76
RFC2-210ENST00000493156 PRR5LQ6MZQ0 368 aa26.01■■□□□ 1.75
RFC2-210ENST00000493156 PNISRQ8TF01 805 aaKnown RBP26.01■■□□□ 1.75
RFC2-210ENST00000493156 MAPK8IP3Q9UPT6 1336 aa26.01■■□□□ 1.75
RFC2-210ENST00000493156 NBPF26B4DH59 902 aa26■■□□□ 1.75
RFC2-210ENST00000493156 KIF3CO14782 793 aa26■■□□□ 1.75
RFC2-210ENST00000493156 PIP4K2AP48426 406 aaPredicted RBP26■■□□□ 1.75
RFC2-210ENST00000493156 C9orf131Q5VYM1 1079 aa26■■□□□ 1.75
RFC2-210ENST00000493156 NBPF10Q6P3W6 841 aaKnown RBP26■■□□□ 1.75
RFC2-210ENST00000493156 C2CD5Q86YS7 1000 aa26■■□□□ 1.75
RFC2-210ENST00000493156 NBPF15Q8N660 670 aa26■■□□□ 1.75
RFC2-210ENST00000493156 RGL2O15211 777 aa25.99■■□□□ 1.75
RFC2-210ENST00000493156 DDX10Q13206 875 aaKnown RBP25.99■■□□□ 1.75
RFC2-210ENST00000493156 BRIP1Q9BX63 1249 aa25.99■■□□□ 1.75
RFC2-210ENST00000493156 MIS18AQ9NYP9 233 aa25.99■■□□□ 1.75
RFC2-210ENST00000493156 PDZRN3Q9UPQ7 1066 aa25.99■■□□□ 1.75
RFC2-210ENST00000493156 H0YIN7 160 aa25.98■■□□□ 1.75
RFC2-210ENST00000493156 CLEC4GQ6UXB4 293 aa25.98■■□□□ 1.75
RFC2-210ENST00000493156 TTLL6Q8N841 843 aa25.98■■□□□ 1.75
RFC2-210ENST00000493156 SETDB2Q96T68 719 aa25.98■■□□□ 1.75
RFC2-210ENST00000493156 MYBBP1AQ9BQG0 1328 aaKnown RBP25.97■■□□□ 1.75
RFC2-210ENST00000493156 PDE6BP35913 854 aa25.96■■□□□ 1.75
RFC2-210ENST00000493156 THUMPD2Q9BTF0 503 aaKnown RBP25.96■■□□□ 1.75
RFC2-210ENST00000493156 EIF4A1P60842 406 aaKnown RBP25.95■■□□□ 1.74
RFC2-210ENST00000493156 CNBD1Q8NA66 436 aa25.95■■□□□ 1.74
RFC2-210ENST00000493156 ZNF652Q9Y2D9 606 aa25.95■■□□□ 1.74
RFC2-210ENST00000493156 ARFGEF2Q9Y6D5 1785 aa25.95■■□□□ 1.74
RFC2-210ENST00000493156 RNF181Q9P0P0 153 aa25.94■■□□□ 1.74
RFC2-210ENST00000493156 CCDC24Q8N4L8 307 aa25.92■■□□□ 1.74
RFC2-210ENST00000493156 ZC3H4Q9UPT8 1303 aaKnown RBP25.91■■□□□ 1.74
RFC2-210ENST00000493156 ST5P78524 1137 aa25.91■■□□□ 1.74
RFC2-210ENST00000493156 RASSF7Q02833 373 aa25.91■■□□□ 1.74
RFC2-210ENST00000493156 TNRC6CQ9HCJ0 1690 aaKnown RBP25.9■■□□□ 1.74
RFC2-210ENST00000493156 TIAM2Q8IVF5 1701 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms