RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 DBF4Q9UBU7 674 aaPredicted RBP15.89■□□□□ 0.13
TRIM11-204ENST00000493030 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
TRIM11-204ENST00000493030 PPP1R12BO60237 982 aaPredicted RBP15.89■□□□□ 0.13
TRIM11-204ENST00000493030 PDIA4P13667 645 aaKnown RBP15.89■□□□□ 0.13
TRIM11-204ENST00000493030 DESP17661 470 aa15.89■□□□□ 0.13
TRIM11-204ENST00000493030 HSP90AB3PQ58FF7 597 aa15.89■□□□□ 0.13
TRIM11-204ENST00000493030 IQCA1Q86XH1 822 aa15.89■□□□□ 0.13
TRIM11-204ENST00000493030 TAF4BQ92750 862 aa15.89■□□□□ 0.13
TRIM11-204ENST00000493030 SLC12A7Q9Y666 1083 aa15.89■□□□□ 0.13
TRIM11-204ENST00000493030 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
TRIM11-204ENST00000493030 ADGRF5Q8IZF2 1346 aa15.89■□□□□ 0.13
TRIM11-204ENST00000493030 WDR78Q5VTH9 848 aa15.88■□□□□ 0.13
TRIM11-204ENST00000493030 ZNF397Q8NF99 534 aaPredicted RBP15.88■□□□□ 0.13
TRIM11-204ENST00000493030 LARP6Q9BRS8 491 aaKnown RBP15.88■□□□□ 0.13
TRIM11-204ENST00000493030 EXOC5O00471 708 aa15.88■□□□□ 0.13
TRIM11-204ENST00000493030 HMGB2P26583 209 aaKnown RBP15.88■□□□□ 0.13
TRIM11-204ENST00000493030 NAIPQ13075 1403 aa15.88■□□□□ 0.13
TRIM11-204ENST00000493030 IQCEQ6IPM2 695 aa15.88■□□□□ 0.13
TRIM11-204ENST00000493030 ABCC11Q96J66 1382 aa15.87■□□□□ 0.13
TRIM11-204ENST00000493030 IL27Q8NEV9 243 aa15.87■□□□□ 0.13
TRIM11-204ENST00000493030 IFIT3O14879 490 aaKnown RBP15.87■□□□□ 0.13
TRIM11-204ENST00000493030 C6orf229H3BNL8 230 aa15.87■□□□□ 0.13
TRIM11-204ENST00000493030 FLIIQ13045 1269 aa15.87■□□□□ 0.13
TRIM11-204ENST00000493030 CCT2P78371 535 aaKnown RBP15.87■□□□□ 0.13
TRIM11-204ENST00000493030 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
TRIM11-204ENST00000493030 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
TRIM11-204ENST00000493030 EIF3JO75822 258 aaKnown RBP15.86■□□□□ 0.13
TRIM11-204ENST00000493030 IDI1Q13907 227 aa15.86■□□□□ 0.13
TRIM11-204ENST00000493030 PLCD4Q9BRC7 762 aa15.86■□□□□ 0.13
TRIM11-204ENST00000493030 GOLGA8BA8MQT2 603 aa15.86■□□□□ 0.13
TRIM11-204ENST00000493030 TTLL12Q14166 644 aaPredicted RBP15.86■□□□□ 0.13
TRIM11-204ENST00000493030 TAF3Q5VWG9 929 aa15.86■□□□□ 0.13
TRIM11-204ENST00000493030 HMGB1P09429 215 aaKnown RBP15.85■□□□□ 0.13
TRIM11-204ENST00000493030 JAKMIP3Q5VZ66 844 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 SH2B1Q9NRF2 756 aaPredicted RBP15.85■□□□□ 0.13
TRIM11-204ENST00000493030 UQCRHLA0A096LP55 91 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 GOLGA8AA7E2F4 631 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 UQCRHP07919 91 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 SCAND2PQ9GZW5 306 aaPredicted RBP15.85■□□□□ 0.13
TRIM11-204ENST00000493030 SNRKQ9NRH2 765 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 C11orf95C9JLR9 678 aaPredicted RBP15.85■□□□□ 0.13
TRIM11-204ENST00000493030 KIAA0754O94854 1291 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 POTEJP0CG39 1038 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 KRT28Q7Z3Y7 464 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 NLRP5P59047 1200 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 NKTRP30414 1462 aaKnown RBP15.85■□□□□ 0.13
TRIM11-204ENST00000493030 GOLIM4O00461 696 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 DHX37Q8IY37 1157 aaKnown RBP15.85■□□□□ 0.13
TRIM11-204ENST00000493030 PKNOX2Q96KN3 472 aa15.85■□□□□ 0.13
TRIM11-204ENST00000493030 SSRP1Q08945 709 aaKnown RBP15.84■□□□□ 0.13
TRIM11-204ENST00000493030 RNF41Q9H4P4 317 aaPredicted RBP15.84■□□□□ 0.13
TRIM11-204ENST00000493030 CCDC194A0A1B0GVG4 234 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 SFPQP23246 707 aaKnown RBP eCLIP15.84■□□□□ 0.13
TRIM11-204ENST00000493030 SPA17Q15506 151 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 LDHAL6AQ6ZMR3 332 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 CCDC102AQ96A19 550 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 TSG101Q99816 390 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 GRIN2AQ12879 1464 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 TRIM27P14373 513 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 FKBP15Q5T1M5 1219 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 PPP4R3AQ6IN85 833 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 CACNA2D4Q7Z3S7 1137 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 CUL5Q93034 780 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 SLC4A8Q2Y0W8 1093 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 TRMT1LQ7Z2T5 733 aaKnown RBP15.84■□□□□ 0.13
TRIM11-204ENST00000493030 ANO10Q9NW15 660 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 ADGRL1O94910 1474 aa15.84■□□□□ 0.13
TRIM11-204ENST00000493030 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.13
TRIM11-204ENST00000493030 CCDC144CPQ8IYA2 1237 aa15.83■□□□□ 0.13
TRIM11-204ENST00000493030 CAMSAP2Q08AD1 1489 aa15.83■□□□□ 0.12
TRIM11-204ENST00000493030 JARID2Q92833 1246 aaPredicted RBP15.83■□□□□ 0.12
TRIM11-204ENST00000493030 RAB34Q9BZG1 259 aa15.83■□□□□ 0.12
TRIM11-204ENST00000493030 FAM83GA6ND36 823 aa15.83■□□□□ 0.12
TRIM11-204ENST00000493030 TRIM21P19474 475 aaKnown RBP15.83■□□□□ 0.12
TRIM11-204ENST00000493030 TMEM266Q2M3C6 531 aa15.83■□□□□ 0.12
TRIM11-204ENST00000493030 CATIPQ7Z7H3 387 aa15.83■□□□□ 0.12
TRIM11-204ENST00000493030 CCDC148Q8NFR7 591 aa15.83■□□□□ 0.12
TRIM11-204ENST00000493030 LIMCH1Q9UPQ0 1083 aa15.83■□□□□ 0.12
TRIM11-204ENST00000493030 GBP2P32456 591 aaPredicted RBP15.82■□□□□ 0.12
TRIM11-204ENST00000493030 UBE3BQ7Z3V4 1068 aa15.82■□□□□ 0.12
TRIM11-204ENST00000493030 PHAXQ9H814 394 aaKnown RBP15.82■□□□□ 0.12
TRIM11-204ENST00000493030 SLF2Q8IX21 1173 aa15.82■□□□□ 0.12
TRIM11-204ENST00000493030 IFNL2Q8IZJ0 200 aa15.82■□□□□ 0.12
TRIM11-204ENST00000493030 CHRNA2Q15822 529 aa15.82■□□□□ 0.12
TRIM11-204ENST00000493030 UBXN4Q92575 508 aa15.82■□□□□ 0.12
TRIM11-204ENST00000493030 ECHDC1Q9NTX5 307 aa15.82■□□□□ 0.12
TRIM11-204ENST00000493030 PTPRCP08575 1304 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 ESPNB1AK53 854 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 PPFIA3O75145 1194 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 LIG1P18858 919 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 HAND2P61296 217 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 CKAP2LQ8IYA6 745 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 EVI5LQ96CN4 794 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 CCDC183Q5T5S1 534 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 VAT1LQ9HCJ6 419 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 CWC25Q9NXE8 425 aaPredicted RBP15.81■□□□□ 0.12
TRIM11-204ENST00000493030 TSHZ3Q63HK5 1081 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 PI4KAP2A4QPH2 592 aa15.81■□□□□ 0.12
TRIM11-204ENST00000493030 EZRP15311 586 aaKnown RBP15.81■□□□□ 0.12
TRIM11-204ENST00000493030 DNA2P51530 1060 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms