RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 ZFP42Q96MM3 310 aa10.45□□□□□ -0.74
TPR-208ENST00000492973 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
TPR-208ENST00000492973 CFAP74Q9C0B2 1584 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 CAMSAP2Q08AD1 1489 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 PLEKHH2Q8IVE3 1493 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 USP17L5A8MUK1 530 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 ATP9BO43861 1147 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 UPP2O95045 317 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 USP4Q13107 963 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 TRIM47Q96LD4 638 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 SENP2Q9HC62 589 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 TIMELESSQ9UNS1 1208 aa10.44□□□□□ -0.74
TPR-208ENST00000492973 FRMPD1Q5SYB0 1578 aa10.43□□□□□ -0.74
TPR-208ENST00000492973 SPINT1O43278 529 aa10.43□□□□□ -0.74
TPR-208ENST00000492973 LZTS3O60299 673 aaPredicted RBP10.43□□□□□ -0.74
TPR-208ENST00000492973 MYCP01106 439 aaPredicted RBP10.43□□□□□ -0.74
TPR-208ENST00000492973 PTGIRP43119 386 aa10.43□□□□□ -0.74
TPR-208ENST00000492973 RELBQ01201 579 aa10.43□□□□□ -0.74
TPR-208ENST00000492973 C6orf118Q5T5N4 469 aa10.43□□□□□ -0.74
TPR-208ENST00000492973 SYCP2Q9BX26 1530 aa10.43□□□□□ -0.74
TPR-208ENST00000492973 TCOF1Q13428 1488 aaKnown RBP10.42□□□□□ -0.74
TPR-208ENST00000492973 ATP5J2-PTCD1G3V325 749 aa10.42□□□□□ -0.74
TPR-208ENST00000492973 BMP2P12643 396 aa10.42□□□□□ -0.74
TPR-208ENST00000492973 CYP2U1Q7Z449 544 aa10.42□□□□□ -0.74
TPR-208ENST00000492973 PLEKHM2Q8IWE5 1019 aa10.42□□□□□ -0.74
TPR-208ENST00000492973 SIRT1Q96EB6 747 aa10.42□□□□□ -0.74
TPR-208ENST00000492973 ITSN2Q9NZM3 1697 aa10.41□□□□□ -0.74
TPR-208ENST00000492973 NCOA4Q13772 614 aa10.41□□□□□ -0.74
TPR-208ENST00000492973 KIFC2Q96AC6 838 aa10.41□□□□□ -0.74
TPR-208ENST00000492973 PPP1R12CQ9BZL4 782 aa10.41□□□□□ -0.74
TPR-208ENST00000492973 TFIP11Q9UBB9 837 aaKnown RBP10.41□□□□□ -0.74
TPR-208ENST00000492973 ZNF518AQ6AHZ1 1483 aa10.41□□□□□ -0.74
TPR-208ENST00000492973 USP17L3A6NCW0 530 aa10.4□□□□□ -0.74
TPR-208ENST00000492973 USP17L4A6NCW7 530 aa10.4□□□□□ -0.74
TPR-208ENST00000492973 PALM3A6NDB9 673 aaPredicted RBP10.4□□□□□ -0.74
TPR-208ENST00000492973 EML3Q32P44 896 aa10.4□□□□□ -0.74
TPR-208ENST00000492973 USP17L2Q6R6M4 530 aa10.4□□□□□ -0.74
TPR-208ENST00000492973 USP17L1Q7RTZ2 530 aa10.4□□□□□ -0.74
TPR-208ENST00000492973 DEPDC4Q8N2C3 294 aa10.4□□□□□ -0.74
TPR-208ENST00000492973 ESF1Q9H501 851 aaKnown RBP10.4□□□□□ -0.74
TPR-208ENST00000492973 ZNF395Q9H8N7 513 aaPredicted RBP10.4□□□□□ -0.74
TPR-208ENST00000492973 MAFBQ9Y5Q3 323 aaPredicted RBP10.4□□□□□ -0.74
TPR-208ENST00000492973 YEATS2Q9ULM3 1422 aa10.4□□□□□ -0.75
TPR-208ENST00000492973 SPAG9O60271 1321 aaKnown RBP10.39□□□□□ -0.75
TPR-208ENST00000492973 ZMYM4Q5VZL5 1548 aa10.39□□□□□ -0.75
TPR-208ENST00000492973 SNRPBP14678 240 aaKnown RBP10.39□□□□□ -0.75
TPR-208ENST00000492973 FAM50AQ14320 339 aaKnown RBP10.39□□□□□ -0.75
TPR-208ENST00000492973 PTPN23Q9H3S7 1636 aa10.39□□□□□ -0.75
TPR-208ENST00000492973 ABCC5O15440 1437 aa10.39□□□□□ -0.75
TPR-208ENST00000492973 RRBP1Q9P2E9 1410 aaKnown RBP10.39□□□□□ -0.75
TPR-208ENST00000492973 KDM5CP41229 1560 aa10.39□□□□□ -0.75
TPR-208ENST00000492973 RICTORQ6R327 1708 aa10.38□□□□□ -0.75
TPR-208ENST00000492973 SOS2Q07890 1332 aaPredicted RBP10.38□□□□□ -0.75
TPR-208ENST00000492973 CCDC141Q6ZP82 1450 aa10.38□□□□□ -0.75
TPR-208ENST00000492973 MAGI2Q86UL8 1455 aa10.38□□□□□ -0.75
TPR-208ENST00000492973 MLH3Q9UHC1 1453 aa10.38□□□□□ -0.75
TPR-208ENST00000492973 C11orf95C9JLR9 678 aaPredicted RBP10.38□□□□□ -0.75
TPR-208ENST00000492973 GNRH1P01148 92 aa10.38□□□□□ -0.75
TPR-208ENST00000492973 TRIM26Q12899 539 aaPredicted RBP10.38□□□□□ -0.75
TPR-208ENST00000492973 ZNF787Q6DD87 383 aa10.38□□□□□ -0.75
TPR-208ENST00000492973 INSM2Q96T92 566 aaPredicted RBP10.38□□□□□ -0.75
TPR-208ENST00000492973 A0A1W2PRU2 124 aa10.37□□□□□ -0.75
TPR-208ENST00000492973 ARHGEF5Q12774 1597 aa10.37□□□□□ -0.75
TPR-208ENST00000492973 NOD1Q9Y239 953 aa10.37□□□□□ -0.75
TPR-208ENST00000492973 PCDHGA11Q9Y5H2 935 aa10.37□□□□□ -0.75
TPR-208ENST00000492973 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.37□□□□□ -0.75
TPR-208ENST00000492973 TSPY4P0CV99 314 aa10.36□□□□□ -0.75
TPR-208ENST00000492973 TSPY10P0CW01 314 aa10.36□□□□□ -0.75
TPR-208ENST00000492973 CTSOP43234 321 aaPredicted RBP10.36□□□□□ -0.75
TPR-208ENST00000492973 CLN3Q13286 438 aa10.36□□□□□ -0.75
TPR-208ENST00000492973 CFAP70Q5T0N1 1121 aa10.36□□□□□ -0.75
TPR-208ENST00000492973 ARHGEF10LQ9HCE6 1279 aa10.36□□□□□ -0.75
TPR-208ENST00000492973 DAPK1P53355 1430 aa10.35□□□□□ -0.75
TPR-208ENST00000492973 PTPRKQ15262 1439 aa10.35□□□□□ -0.75
TPR-208ENST00000492973 ZFYVE16Q7Z3T8 1539 aa10.35□□□□□ -0.75
TPR-208ENST00000492973 TTLL8A6PVC2 850 aa10.35□□□□□ -0.75
TPR-208ENST00000492973 C1orf115Q9H7X2 142 aa10.35□□□□□ -0.75
TPR-208ENST00000492973 RTEL1-TNFRSF6BF6WH68 1400 aa10.34□□□□□ -0.75
TPR-208ENST00000492973 C9orf84Q5VXU9 1444 aa10.34□□□□□ -0.75
TPR-208ENST00000492973 ARHGEF40Q8TER5 1519 aa10.34□□□□□ -0.75
TPR-208ENST00000492973 FOXD4L5Q5VV16 416 aaPredicted RBP10.34□□□□□ -0.75
TPR-208ENST00000492973 RAB6BQ9NRW1 208 aa10.34□□□□□ -0.75
TPR-208ENST00000492973 DNMT3LQ9UJW3 386 aa10.34□□□□□ -0.75
TPR-208ENST00000492973 ATP10AO60312 1499 aa10.34□□□□□ -0.75
TPR-208ENST00000492973 STAU1O95793 577 aaKnown RBP10.33□□□□□ -0.76
TPR-208ENST00000492973 IL2RAP01589 272 aa10.33□□□□□ -0.76
TPR-208ENST00000492973 SCNN1DP51172 638 aa10.33□□□□□ -0.76
TPR-208ENST00000492973 GTF2IP78347 998 aa10.33□□□□□ -0.76
TPR-208ENST00000492973 RNF217Q8TC41 542 aa10.33□□□□□ -0.76
TPR-208ENST00000492973 ETNK1Q9HBU6 452 aa10.33□□□□□ -0.76
TPR-208ENST00000492973 POLMQ9NP87 494 aaPredicted RBP10.33□□□□□ -0.76
TPR-208ENST00000492973 HRH3Q9Y5N1 445 aa10.33□□□□□ -0.76
TPR-208ENST00000492973 HECW2Q9P2P5 1572 aa10.33□□□□□ -0.76
TPR-208ENST00000492973 ATP7AQ04656 1500 aa10.33□□□□□ -0.76
TPR-208ENST00000492973 INO80Q9ULG1 1556 aaPredicted RBP10.32□□□□□ -0.76
TPR-208ENST00000492973 DIP2CQ9Y2E4 1556 aa10.32□□□□□ -0.76
TPR-208ENST00000492973 SHANK2Q9UPX8 1470 aa10.32□□□□□ -0.76
TPR-208ENST00000492973 MEN1O00255 615 aa10.32□□□□□ -0.76
TPR-208ENST00000492973 LMOD1P29536 600 aaPredicted RBP10.32□□□□□ -0.76
TPR-208ENST00000492973 RNF144AP50876 292 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms