RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 DDX27Q96GQ7 796 aaKnown RBP10.19□□□□□ -0.78
SPTA1-208ENST00000492934 TERF2IPQ9NYB0 399 aa10.19□□□□□ -0.78
SPTA1-208ENST00000492934 SLC15A2Q16348 729 aa10.18□□□□□ -0.78
SPTA1-208ENST00000492934 Q6ZNB5 142 aa10.18□□□□□ -0.78
SPTA1-208ENST00000492934 PAXIP1Q6ZW49 1069 aaPredicted RBP10.18□□□□□ -0.78
SPTA1-208ENST00000492934 SLC12A5Q9H2X9 1139 aa10.18□□□□□ -0.78
SPTA1-208ENST00000492934 DOT1LQ8TEK3 1739 aa10.17□□□□□ -0.78
SPTA1-208ENST00000492934 ITGBL1O95965 494 aaPredicted RBP10.17□□□□□ -0.78
SPTA1-208ENST00000492934 MFSD10Q14728 455 aa10.17□□□□□ -0.78
SPTA1-208ENST00000492934 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
SPTA1-208ENST00000492934 LTV1Q96GA3 475 aaPredicted RBP10.15□□□□□ -0.78
SPTA1-208ENST00000492934 MTFR1LQ9H019 292 aa10.15□□□□□ -0.78
SPTA1-208ENST00000492934 MEGF6O75095 1541 aa10.14□□□□□ -0.79
SPTA1-208ENST00000492934 ZNF827Q17R98 1081 aa10.14□□□□□ -0.79
SPTA1-208ENST00000492934 ZDHHC16Q969W1 377 aa10.14□□□□□ -0.79
SPTA1-208ENST00000492934 COG3Q96JB2 828 aa10.14□□□□□ -0.79
SPTA1-208ENST00000492934 FHDC1Q9C0D6 1143 aaPredicted RBP10.14□□□□□ -0.79
SPTA1-208ENST00000492934 RTL1A6NKG5 1358 aa10.14□□□□□ -0.79
SPTA1-208ENST00000492934 ANKRD36BQ8N2N9 1353 aa10.14□□□□□ -0.79
SPTA1-208ENST00000492934 SHANK3Q9BYB0 1731 aa10.13□□□□□ -0.79
SPTA1-208ENST00000492934 MAP3K19Q56UN5 1328 aa10.13□□□□□ -0.79
SPTA1-208ENST00000492934 DDX54Q8TDD1 881 aaKnown RBP10.13□□□□□ -0.79
SPTA1-208ENST00000492934 IP6K1Q92551 441 aa10.13□□□□□ -0.79
SPTA1-208ENST00000492934 PUS7Q96PZ0 661 aaKnown RBP10.13□□□□□ -0.79
SPTA1-208ENST00000492934 TESK2Q96S53 571 aa10.13□□□□□ -0.79
SPTA1-208ENST00000492934 ST20-MTHFSA0A0A6YYL1 179 aa10.12□□□□□ -0.79
SPTA1-208ENST00000492934 HOXC9P31274 260 aa10.12□□□□□ -0.79
SPTA1-208ENST00000492934 SYTL4Q96C24 671 aaPredicted RBP10.12□□□□□ -0.79
SPTA1-208ENST00000492934 ADAM33Q9BZ11 813 aa10.12□□□□□ -0.79
SPTA1-208ENST00000492934 SMG6Q86US8 1419 aaKnown RBP10.12□□□□□ -0.79
SPTA1-208ENST00000492934 QSER1Q2KHR3 1735 aa10.12□□□□□ -0.79
SPTA1-208ENST00000492934 UTRNP46939 3433 aa10.12□□□□□ -0.79
SPTA1-208ENST00000492934 USP47Q96K76 1375 aa10.12□□□□□ -0.79
SPTA1-208ENST00000492934 AMPHP49418 695 aa10.11□□□□□ -0.79
SPTA1-208ENST00000492934 ANKK1Q8NFD2 765 aa10.11□□□□□ -0.79
SPTA1-208ENST00000492934 ARXQ96QS3 562 aa10.11□□□□□ -0.79
SPTA1-208ENST00000492934 SYT17Q9BSW7 474 aa10.11□□□□□ -0.79
SPTA1-208ENST00000492934 LRRC4BQ9NT99 713 aa10.11□□□□□ -0.79
SPTA1-208ENST00000492934 KIF20BQ96Q89 1820 aa10.11□□□□□ -0.79
SPTA1-208ENST00000492934 TUBGCP6Q96RT7 1819 aa10.11□□□□□ -0.79
SPTA1-208ENST00000492934 NSD2O96028 1365 aa10.11□□□□□ -0.79
SPTA1-208ENST00000492934 RGPD2P0DJD1 1756 aa10.11□□□□□ -0.79
SPTA1-208ENST00000492934 SLC27A3Q5K4L6 730 aa10.1□□□□□ -0.79
SPTA1-208ENST00000492934 MAP3K5Q99683 1374 aa10.1□□□□□ -0.79
SPTA1-208ENST00000492934 LY75O60449 1722 aa10.1□□□□□ -0.79
SPTA1-208ENST00000492934 FBLN1P23142 703 aa10.09□□□□□ -0.79
SPTA1-208ENST00000492934 RABGEF1Q9UJ41 708 aa10.09□□□□□ -0.79
SPTA1-208ENST00000492934 PNPLA7Q6ZV29 1317 aa10.08□□□□□ -0.8
SPTA1-208ENST00000492934 EVI5O60447 810 aa10.08□□□□□ -0.8
SPTA1-208ENST00000492934 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
SPTA1-208ENST00000492934 PRIM1P49642 420 aaKnown RBP10.08□□□□□ -0.8
SPTA1-208ENST00000492934 TMF1P82094 1093 aa10.08□□□□□ -0.8
SPTA1-208ENST00000492934 RRS1Q15050 365 aaKnown RBP10.08□□□□□ -0.8
SPTA1-208ENST00000492934 NYAP1Q6ZVC0 841 aa10.08□□□□□ -0.8
SPTA1-208ENST00000492934 USHBP1Q8N6Y0 703 aa10.08□□□□□ -0.8
SPTA1-208ENST00000492934 GGNBP2Q9H3C7 697 aa10.08□□□□□ -0.8
SPTA1-208ENST00000492934 FLT4P35916 1363 aa10.07□□□□□ -0.8
SPTA1-208ENST00000492934 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
SPTA1-208ENST00000492934 POLD1P28340 1107 aa10.07□□□□□ -0.8
SPTA1-208ENST00000492934 KCNQ4P56696 695 aa10.07□□□□□ -0.8
SPTA1-208ENST00000492934 LAPTM4AQ15012 233 aa10.07□□□□□ -0.8
SPTA1-208ENST00000492934 ZCRB1Q8TBF4 217 aaKnown RBP10.07□□□□□ -0.8
SPTA1-208ENST00000492934 TFCP2L1Q9NZI6 479 aa10.07□□□□□ -0.8
SPTA1-208ENST00000492934 C5P01031 1676 aa10.06□□□□□ -0.8
SPTA1-208ENST00000492934 ZNF784Q8NCA9 323 aaPredicted RBP10.06□□□□□ -0.8
SPTA1-208ENST00000492934 SLC16A10Q8TF71 515 aa10.06□□□□□ -0.8
SPTA1-208ENST00000492934 RAPGEF4Q8WZA2 1011 aa10.06□□□□□ -0.8
SPTA1-208ENST00000492934 CCNL1Q9UK58 526 aaPredicted RBP10.06□□□□□ -0.8
SPTA1-208ENST00000492934 COL24A1Q17RW2 1714 aa10.06□□□□□ -0.8
SPTA1-208ENST00000492934 NSD3Q9BZ95 1437 aa10.06□□□□□ -0.8
SPTA1-208ENST00000492934 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
SPTA1-208ENST00000492934 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
SPTA1-208ENST00000492934 TOGARAM1Q9Y4F4 1720 aa10.05□□□□□ -0.8
SPTA1-208ENST00000492934 INSRP06213 1382 aa10.05□□□□□ -0.8
SPTA1-208ENST00000492934 FYB1O15117 783 aa10.05□□□□□ -0.8
SPTA1-208ENST00000492934 MAP3K9P80192 1104 aa10.05□□□□□ -0.8
SPTA1-208ENST00000492934 NBPF6Q5VWK0 638 aa10.05□□□□□ -0.8
SPTA1-208ENST00000492934 NBPF4Q96M43 638 aa10.05□□□□□ -0.8
SPTA1-208ENST00000492934 CGNL1Q0VF96 1302 aa10.05□□□□□ -0.8
SPTA1-208ENST00000492934 PKD1L3Q7Z443 1732 aa10.04□□□□□ -0.8
SPTA1-208ENST00000492934 ANKRD26Q9UPS8 1709 aa10.04□□□□□ -0.8
SPTA1-208ENST00000492934 KIF24Q5T7B8 1368 aa10.04□□□□□ -0.8
SPTA1-208ENST00000492934 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
SPTA1-208ENST00000492934 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
SPTA1-208ENST00000492934 TATP17735 454 aaPredicted RBP10.04□□□□□ -0.8
SPTA1-208ENST00000492934 BCAMP50895 628 aa10.04□□□□□ -0.8
SPTA1-208ENST00000492934 KCNC4Q03721 635 aa10.04□□□□□ -0.8
SPTA1-208ENST00000492934 CAMK2BQ13554 666 aa10.04□□□□□ -0.8
SPTA1-208ENST00000492934 GPR162Q16538 588 aa10.04□□□□□ -0.8
SPTA1-208ENST00000492934 LAPTM4BQ86VI4 370 aa10.04□□□□□ -0.8
SPTA1-208ENST00000492934 PALLDQ8WX93 1383 aa10.03□□□□□ -0.8
SPTA1-208ENST00000492934 CDCA8Q53HL2 280 aa10.03□□□□□ -0.8
SPTA1-208ENST00000492934 WDR70Q9NW82 654 aa10.03□□□□□ -0.8
SPTA1-208ENST00000492934 KAT6BQ8WYB5 2073 aa10.02□□□□□ -0.81
SPTA1-208ENST00000492934 CHD4Q14839 1912 aa10.02□□□□□ -0.81
SPTA1-208ENST00000492934 PROX2Q3B8N5 592 aa10.02□□□□□ -0.81
SPTA1-208ENST00000492934 HSP90AB2PQ58FF8 381 aa10.02□□□□□ -0.81
SPTA1-208ENST00000492934 MSL1Q68DK7 614 aa10.02□□□□□ -0.81
SPTA1-208ENST00000492934 NLGN2Q8NFZ4 835 aa10.02□□□□□ -0.81
SPTA1-208ENST00000492934 C4BP0C0L5 1744 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms