RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 ANXA1P04083 346 aa11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 CHD1LQ86WJ1 897 aa11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 DDX54Q8TDD1 881 aaKnown RBP11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 DNAAF4Q8WXU2 420 aa11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 ZNF496Q96IT1 587 aaPredicted RBP11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 SRCIN1Q9C0H9 1055 aa11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 USP35Q9P2H5 1018 aa11.44□□□□□ -0.58
SMARCC1-208ENST00000492896 UBAP1LF5GYI3 381 aa11.43□□□□□ -0.58
SMARCC1-208ENST00000492896 DDX58O95786 925 aaKnown RBP11.43□□□□□ -0.58
SMARCC1-208ENST00000492896 SNRPA1P09661 255 aaKnown RBP11.43□□□□□ -0.58
SMARCC1-208ENST00000492896 PROSER3Q2NL68 480 aa11.43□□□□□ -0.58
SMARCC1-208ENST00000492896 LNPKQ9C0E8 428 aa11.43□□□□□ -0.58
SMARCC1-208ENST00000492896 KAT6BQ8WYB5 2073 aa11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 SLIT2O94813 1529 aa11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 PI4KAP2A4QPH2 592 aa11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 UBTFL1P0CB47 393 aaPredicted RBP11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 ANKRD45Q5TZF3 282 aa11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 KSR2Q6VAB6 950 aa11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 PI4KAP1Q8N8J0 262 aa11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 DCTPP1Q9H773 170 aa11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.42□□□□□ -0.58
SMARCC1-208ENST00000492896 ERBB4Q15303 1308 aa11.41□□□□□ -0.58
SMARCC1-208ENST00000492896 BEND3Q5T5X7 828 aa11.41□□□□□ -0.58
SMARCC1-208ENST00000492896 CDCA7Q9BWT1 371 aaPredicted RBP11.41□□□□□ -0.58
SMARCC1-208ENST00000492896 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
SMARCC1-208ENST00000492896 JCADQ9P266 1359 aa11.41□□□□□ -0.58
SMARCC1-208ENST00000492896 NUTM2BA6NNL0 878 aaPredicted RBP11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 NUTM2EB1AL46 878 aaPredicted RBP11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 ALDH1L1O75891 902 aa11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 PDIA6Q15084 440 aa11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 NPM2Q86SE8 214 aaKnown RBP11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 NUTM2AQ8IVF1 878 aaPredicted RBP11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 TMOD3Q9NYL9 352 aa11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 MAP3K2Q9Y2U5 619 aa11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 THRAP3Q9Y2W1 955 aaKnown RBP11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 LRRFIP2Q9Y608 721 aaKnown RBP11.4□□□□□ -0.58
SMARCC1-208ENST00000492896 IBTKQ9P2D0 1353 aaPredicted RBP11.4□□□□□ -0.59
SMARCC1-208ENST00000492896 TUBGCP6Q96RT7 1819 aa11.39□□□□□ -0.59
SMARCC1-208ENST00000492896 SPATA31A1Q5TZJ5 1347 aa11.39□□□□□ -0.59
SMARCC1-208ENST00000492896 USP44Q9H0E7 712 aa11.39□□□□□ -0.59
SMARCC1-208ENST00000492896 TJP1Q07157 1748 aa11.38□□□□□ -0.59
SMARCC1-208ENST00000492896 EXOC5O00471 708 aa11.38□□□□□ -0.59
SMARCC1-208ENST00000492896 MYL6BP14649 208 aa11.38□□□□□ -0.59
SMARCC1-208ENST00000492896 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
SMARCC1-208ENST00000492896 XAGE3Q8WTP9 111 aa11.38□□□□□ -0.59
SMARCC1-208ENST00000492896 HDAC5Q9UQL6 1122 aa11.38□□□□□ -0.59
SMARCC1-208ENST00000492896 USP16Q9Y5T5 823 aa11.38□□□□□ -0.59
SMARCC1-208ENST00000492896 AIMP1Q12904 312 aaKnown RBP11.37□□□□□ -0.59
SMARCC1-208ENST00000492896 LRP10Q7Z4F1 713 aa11.37□□□□□ -0.59
SMARCC1-208ENST00000492896 RIC3Q7Z5B4 369 aa11.37□□□□□ -0.59
SMARCC1-208ENST00000492896 LINS1Q8NG48 757 aa11.37□□□□□ -0.59
SMARCC1-208ENST00000492896 AK9Q5TCS8 1911 aa11.37□□□□□ -0.59
SMARCC1-208ENST00000492896 SPATA31A5Q5VU36 1347 aa11.36□□□□□ -0.59
SMARCC1-208ENST00000492896 SPATA31A7Q8IWB4 1347 aa11.36□□□□□ -0.59
SMARCC1-208ENST00000492896 ANKRD36CQ5JPF3 1778 aa11.36□□□□□ -0.59
SMARCC1-208ENST00000492896 BCL9O00512 1426 aa11.36□□□□□ -0.59
SMARCC1-208ENST00000492896 CICQ96RK0 1608 aaPredicted RBP11.36□□□□□ -0.59
SMARCC1-208ENST00000492896 NEXNQ0ZGT2 675 aa11.36□□□□□ -0.59
SMARCC1-208ENST00000492896 BMP2KLQ5H9B9 411 aa11.36□□□□□ -0.59
SMARCC1-208ENST00000492896 COPS6Q7L5N1 327 aa11.36□□□□□ -0.59
SMARCC1-208ENST00000492896 PNMA6EA0A0J9YXQ4 647 aa11.35□□□□□ -0.59
SMARCC1-208ENST00000492896 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
SMARCC1-208ENST00000492896 SSH3Q8TE77 659 aa11.35□□□□□ -0.59
SMARCC1-208ENST00000492896 DDRGK1Q96HY6 314 aa11.35□□□□□ -0.59
SMARCC1-208ENST00000492896 IPO9Q96P70 1041 aaKnown RBP11.35□□□□□ -0.59
SMARCC1-208ENST00000492896 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
SMARCC1-208ENST00000492896 UPF2Q9HAU5 1272 aaKnown RBP11.35□□□□□ -0.59
SMARCC1-208ENST00000492896 C9orf78Q9NZ63 289 aaPredicted RBP11.35□□□□□ -0.59
SMARCC1-208ENST00000492896 UTYO14607 1347 aa11.35□□□□□ -0.59
SMARCC1-208ENST00000492896 APBB1O00213 710 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 GRM8O00222 908 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 PTCD1O75127 700 aaKnown RBP11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 PIP4K2AP48426 406 aaPredicted RBP11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 DDB1Q16531 1140 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 CWF19L2Q2TBE0 894 aaKnown RBP11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 BARGINQ6ZT62 677 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 ANKRD13DQ6ZTN6 518 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 PIGBQ92521 554 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 MYD88Q99836 296 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 EXOC6BQ9Y2D4 811 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 CCDC9Q9Y3X0 531 aaKnown RBP11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 SPATA31A6Q5VVP1 1343 aa11.34□□□□□ -0.59
SMARCC1-208ENST00000492896 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 NBPF26B4DH59 902 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 SMARCA5O60264 1052 aaPredicted RBP11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 IGKV5-2P06315 115 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 MTX1Q13505 466 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 POLA2Q14181 598 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 NBPF14Q5TI25 921 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 NBPF10Q6P3W6 841 aaKnown RBP11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 PPP1R42Q7Z4L9 355 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 UNC5CLQ8IV45 518 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 PLEKHM2Q8IWE5 1019 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 NBPF15Q8N660 670 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 PLBD2Q8NHP8 589 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
SMARCC1-208ENST00000492896 TEX13AQ9BXU3 409 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms