RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 SLC52A2Q9HAB3 445 aa15.02■□□□□ -0
SND1-215ENST00000492772 UBR2Q8IWV8 1755 aa15.02□□□□□ -0.01
SND1-215ENST00000492772 HSPA5P11021 654 aaKnown RBP15.01□□□□□ -0.01
SND1-215ENST00000492772 IL13P35225 146 aa15.01□□□□□ -0.01
SND1-215ENST00000492772 USPL1Q5W0Q7 1092 aa15.01□□□□□ -0.01
SND1-215ENST00000492772 DNAJC10Q8IXB1 793 aa15.01□□□□□ -0.01
SND1-215ENST00000492772 JMYQ8N9B5 988 aa15.01□□□□□ -0.01
SND1-215ENST00000492772 SMC1BQ8NDV3 1235 aa15.01□□□□□ -0.01
SND1-215ENST00000492772 RRAGCQ9HB90 399 aa15□□□□□ -0.01
SND1-215ENST00000492772 NARFQ9UHQ1 456 aa15□□□□□ -0.01
SND1-215ENST00000492772 KNSTRNQ9Y448 316 aa15□□□□□ -0.01
SND1-215ENST00000492772 CYP19A1P11511 503 aaPredicted RBP14.99□□□□□ -0.01
SND1-215ENST00000492772 SCN7AQ01118 1682 aa14.99□□□□□ -0.01
SND1-215ENST00000492772 LMNB1P20700 586 aa14.98□□□□□ -0.01
SND1-215ENST00000492772 HTRA3P83110 453 aa14.98□□□□□ -0.01
SND1-215ENST00000492772 RASSF7Q02833 373 aa14.98□□□□□ -0.01
SND1-215ENST00000492772 NFIXQ14938 502 aa14.98□□□□□ -0.01
SND1-215ENST00000492772 RNMTO43148 476 aaKnown RBP14.97□□□□□ -0.01
SND1-215ENST00000492772 VSIG10Q8N0Z9 540 aa14.97□□□□□ -0.01
SND1-215ENST00000492772 ZBTB1Q9Y2K1 713 aa14.97□□□□□ -0.01
SND1-215ENST00000492772 CCDC88AQ3V6T2 1871 aa14.97□□□□□ -0.01
SND1-215ENST00000492772 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
SND1-215ENST00000492772 LGR6Q9HBX8 967 aa14.96□□□□□ -0.01
SND1-215ENST00000492772 GLTPD2A6NH11 291 aa14.95□□□□□ -0.02
SND1-215ENST00000492772 SERPINB2P05120 415 aa14.95□□□□□ -0.02
SND1-215ENST00000492772 VEGFAP15692 232 aaPredicted RBP14.95□□□□□ -0.02
SND1-215ENST00000492772 SLC39A6Q13433 755 aa14.95□□□□□ -0.02
SND1-215ENST00000492772 ANKRD31Q8N7Z5 1873 aa14.95□□□□□ -0.02
SND1-215ENST00000492772 COL11A2P13942 1736 aaPredicted RBP14.95□□□□□ -0.02
SND1-215ENST00000492772 DICER1Q9UPY3 1922 aaKnown RBP14.94□□□□□ -0.02
SND1-215ENST00000492772 C2CD5Q86YS7 1000 aa14.94□□□□□ -0.02
SND1-215ENST00000492772 BCL2L12Q9HB09 334 aa14.94□□□□□ -0.02
SND1-215ENST00000492772 CARMIL3Q8ND23 1372 aa14.94□□□□□ -0.02
SND1-215ENST00000492772 A0A087WZG4 1122 aa14.93□□□□□ -0.02
SND1-215ENST00000492772 H0YIN7 160 aa14.93□□□□□ -0.02
SND1-215ENST00000492772 HMOX1P09601 288 aa14.93□□□□□ -0.02
SND1-215ENST00000492772 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
SND1-215ENST00000492772 COL13A1Q5TAT6 717 aaPredicted RBP14.93□□□□□ -0.02
SND1-215ENST00000492772 SIPA1L3O60292 1781 aaPredicted RBP14.93□□□□□ -0.02
SND1-215ENST00000492772 NFKBIEO00221 500 aa14.92□□□□□ -0.02
SND1-215ENST00000492772 STARD3NLO95772 234 aa14.92□□□□□ -0.02
SND1-215ENST00000492772 MTHFSDQ2M296 383 aaKnown RBP14.92□□□□□ -0.02
SND1-215ENST00000492772 TTC5Q8N0Z6 440 aa14.92□□□□□ -0.02
SND1-215ENST00000492772 PDZRN3Q9UPQ7 1066 aa14.92□□□□□ -0.02
SND1-215ENST00000492772 FER1L6Q2WGJ9 1857 aa14.92□□□□□ -0.02
SND1-215ENST00000492772 ARFGEF2Q9Y6D5 1785 aa14.91□□□□□ -0.02
SND1-215ENST00000492772 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
SND1-215ENST00000492772 PRELPP51888 382 aa14.91□□□□□ -0.02
SND1-215ENST00000492772 PCGF6Q9BYE7 350 aa14.91□□□□□ -0.02
SND1-215ENST00000492772 PCNTO95613 3336 aa14.91□□□□□ -0.02
SND1-215ENST00000492772 BCORQ6W2J9 1755 aa14.9□□□□□ -0.02
SND1-215ENST00000492772 DIAPH1O60610 1272 aaKnown RBP14.9□□□□□ -0.02
SND1-215ENST00000492772 EIF5P55010 431 aaKnown RBP14.9□□□□□ -0.02
SND1-215ENST00000492772 TNS4Q8IZW8 715 aa14.9□□□□□ -0.02
SND1-215ENST00000492772 PDE6BP35913 854 aa14.89□□□□□ -0.03
SND1-215ENST00000492772 DPY19L2Q6NUT2 758 aa14.89□□□□□ -0.03
SND1-215ENST00000492772 BICDL1Q6ZP65 573 aa14.89□□□□□ -0.03
SND1-215ENST00000492772 CACNA1SQ13698 1873 aa14.89□□□□□ -0.03
SND1-215ENST00000492772 COL3A1P02461 1466 aaPredicted RBP14.89□□□□□ -0.03
SND1-215ENST00000492772 HEG1Q9ULI3 1381 aa14.88□□□□□ -0.03
SND1-215ENST00000492772 BRIP1Q9BX63 1249 aa14.88□□□□□ -0.03
SND1-215ENST00000492772 TEX13AQ9BXU3 409 aaPredicted RBP14.88□□□□□ -0.03
SND1-215ENST00000492772 LTBP3Q9NS15 1303 aa14.88□□□□□ -0.03
SND1-215ENST00000492772 TEFQ10587 303 aa14.87□□□□□ -0.03
SND1-215ENST00000492772 TBC1D9BQ66K14 1250 aa14.87□□□□□ -0.03
SND1-215ENST00000492772 ZNF622Q969S3 477 aaKnown RBP eCLIP14.87□□□□□ -0.03
SND1-215ENST00000492772 HSPA1AP0DMV8 641 aaKnown RBP14.86□□□□□ -0.03
SND1-215ENST00000492772 HSPA1BP0DMV9 641 aaKnown RBP14.86□□□□□ -0.03
SND1-215ENST00000492772 IL6STP40189 918 aaPredicted RBP14.86□□□□□ -0.03
SND1-215ENST00000492772 PRR5LQ6MZQ0 368 aa14.86□□□□□ -0.03
SND1-215ENST00000492772 ZNF790Q6PG37 636 aa14.86□□□□□ -0.03
SND1-215ENST00000492772 GAS2L2Q8NHY3 880 aa14.86□□□□□ -0.03
SND1-215ENST00000492772 ZNF496Q96IT1 587 aaPredicted RBP14.86□□□□□ -0.03
SND1-215ENST00000492772 KIF7Q2M1P5 1343 aa14.86□□□□□ -0.03
SND1-215ENST00000492772 GNAT3A8MTJ3 354 aa14.85□□□□□ -0.03
SND1-215ENST00000492772 POTECB2RU33 542 aa14.85□□□□□ -0.03
SND1-215ENST00000492772 C21orf2O43822 256 aa14.85□□□□□ -0.03
SND1-215ENST00000492772 CAPN15O75808 1086 aa14.85□□□□□ -0.03
SND1-215ENST00000492772 ERFEQ4G0M1 354 aa14.85□□□□□ -0.03
SND1-215ENST00000492772 SOGA3Q5TF21 947 aa14.85□□□□□ -0.03
SND1-215ENST00000492772 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
SND1-215ENST00000492772 CNBD1Q8NA66 436 aa14.85□□□□□ -0.03
SND1-215ENST00000492772 TAOK3Q9H2K8 898 aa14.85□□□□□ -0.03
SND1-215ENST00000492772 ZNF330Q9Y3S2 320 aaPredicted RBP14.85□□□□□ -0.03
SND1-215ENST00000492772 NPHP1O15259 732 aa14.84□□□□□ -0.03
SND1-215ENST00000492772 ST5P78524 1137 aa14.84□□□□□ -0.03
SND1-215ENST00000492772 FMNL2Q96PY5 1086 aa14.84□□□□□ -0.03
SND1-215ENST00000492772 SLX4Q8IY92 1834 aa14.84□□□□□ -0.03
SND1-215ENST00000492772 SCN4AP35499 1836 aa14.83□□□□□ -0.04
SND1-215ENST00000492772 CC2D1BQ5T0F9 858 aaKnown RBP14.83□□□□□ -0.04
SND1-215ENST00000492772 STYK1Q6J9G0 422 aa14.83□□□□□ -0.04
SND1-215ENST00000492772 CHADLQ6NUI6 762 aa14.83□□□□□ -0.04
SND1-215ENST00000492772 CNKSR1Q969H4 720 aa14.83□□□□□ -0.04
SND1-215ENST00000492772 SETDB2Q96T68 719 aa14.83□□□□□ -0.04
SND1-215ENST00000492772 ZNF219Q9P2Y4 722 aaPredicted RBP14.83□□□□□ -0.04
SND1-215ENST00000492772 TBC1D2BQ9UPU7 963 aa14.83□□□□□ -0.04
SND1-215ENST00000492772 CEMIPQ8WUJ3 1361 aa14.83□□□□□ -0.04
SND1-215ENST00000492772 NPC1L1Q9UHC9 1359 aa14.83□□□□□ -0.04
SND1-215ENST00000492772 U2SURPO15042 1029 aaKnown RBP14.82□□□□□ -0.04
SND1-215ENST00000492772 PER1O15534 1290 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms