RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 PHF8Q9UPP1 1060 aa19.62■□□□□ 0.73
SEMA4D-220ENST00000492386 SURF6O75683 361 aaKnown RBP19.62■□□□□ 0.73
SEMA4D-220ENST00000492386 LMO7Q8WWI1 1683 aa19.61■□□□□ 0.73
SEMA4D-220ENST00000492386 EPB41L2O43491 1005 aaKnown RBP19.61■□□□□ 0.73
SEMA4D-220ENST00000492386 PI4K2BQ8TCG2 481 aa19.61■□□□□ 0.73
SEMA4D-220ENST00000492386 RHPN1Q8TCX5 695 aa19.61■□□□□ 0.73
SEMA4D-220ENST00000492386 RBM27Q9P2N5 1060 aaKnown RBP19.61■□□□□ 0.73
SEMA4D-220ENST00000492386 HOXB7P09629 217 aa19.61■□□□□ 0.73
SEMA4D-220ENST00000492386 EIF2S2P20042 333 aaKnown RBP19.61■□□□□ 0.73
SEMA4D-220ENST00000492386 CHD2O14647 1828 aaKnown RBP19.6■□□□□ 0.73
SEMA4D-220ENST00000492386 NBPF7P0C2Y1 421 aaPredicted RBP19.6■□□□□ 0.73
SEMA4D-220ENST00000492386 BEND3Q5T5X7 828 aa19.6■□□□□ 0.73
SEMA4D-220ENST00000492386 FOXD4L5Q5VV16 416 aaPredicted RBP19.6■□□□□ 0.73
SEMA4D-220ENST00000492386 FOXD4L4Q8WXT5 416 aaPredicted RBP19.6■□□□□ 0.73
SEMA4D-220ENST00000492386 CHPF2Q9P2E5 772 aa19.6■□□□□ 0.73
SEMA4D-220ENST00000492386 HSPA4P34932 840 aa19.59■□□□□ 0.73
SEMA4D-220ENST00000492386 RBSNQ9H1K0 784 aa19.59■□□□□ 0.73
SEMA4D-220ENST00000492386 CRYBG1Q9Y4K1 1723 aa19.59■□□□□ 0.73
SEMA4D-220ENST00000492386 SRGAP3O43295 1099 aa19.59■□□□□ 0.73
SEMA4D-220ENST00000492386 ANP32BQ92688 251 aaKnown RBP19.59■□□□□ 0.73
SEMA4D-220ENST00000492386 UPF3BQ9BZI7 483 aaKnown RBP19.59■□□□□ 0.73
SEMA4D-220ENST00000492386 NSFL1CQ9UNZ2 370 aaKnown RBP19.59■□□□□ 0.73
SEMA4D-220ENST00000492386 PHRF1Q9P1Y6 1649 aaKnown RBP19.59■□□□□ 0.73
SEMA4D-220ENST00000492386 KCNQ3O43525 872 aa19.58■□□□□ 0.73
SEMA4D-220ENST00000492386 PRIM1P49642 420 aaKnown RBP19.58■□□□□ 0.73
SEMA4D-220ENST00000492386 NOL8Q76FK4 1167 aaKnown RBP19.58■□□□□ 0.73
SEMA4D-220ENST00000492386 DNAAF4Q8WXU2 420 aa19.58■□□□□ 0.73
SEMA4D-220ENST00000492386 NAP1L5Q96NT1 182 aaPredicted RBP19.58■□□□□ 0.73
SEMA4D-220ENST00000492386 TMEM63CQ9P1W3 806 aa19.58■□□□□ 0.73
SEMA4D-220ENST00000492386 KIF1BPQ96EK5 621 aa19.58■□□□□ 0.72
SEMA4D-220ENST00000492386 PI4KAP2A4QPH2 592 aa19.57■□□□□ 0.72
SEMA4D-220ENST00000492386 MAP4K4O95819 1239 aaPredicted RBP19.57■□□□□ 0.72
SEMA4D-220ENST00000492386 PI4KAP1Q8N8J0 262 aa19.57■□□□□ 0.72
SEMA4D-220ENST00000492386 ADCY9O60503 1353 aa19.57■□□□□ 0.72
SEMA4D-220ENST00000492386 RAD50Q92878 1312 aa19.56■□□□□ 0.72
SEMA4D-220ENST00000492386 SGSM2O43147 1006 aa19.56■□□□□ 0.72
SEMA4D-220ENST00000492386 MBD3O95983 291 aa19.55■□□□□ 0.72
SEMA4D-220ENST00000492386 CHMP4AQ9BY43 222 aa19.55■□□□□ 0.72
SEMA4D-220ENST00000492386 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
SEMA4D-220ENST00000492386 ANXA1P04083 346 aa19.54■□□□□ 0.72
SEMA4D-220ENST00000492386 AKAP4Q5JQC9 854 aa19.54■□□□□ 0.72
SEMA4D-220ENST00000492386 LRSAM1Q6UWE0 723 aa19.54■□□□□ 0.72
SEMA4D-220ENST00000492386 USP42Q9H9J4 1324 aaKnown RBP19.54■□□□□ 0.72
SEMA4D-220ENST00000492386 ZSCAN30Q86W11 494 aa19.54■□□□□ 0.72
SEMA4D-220ENST00000492386 LSG1Q9H089 658 aaKnown RBP19.54■□□□□ 0.72
SEMA4D-220ENST00000492386 SYCE3A1L190 88 aa19.53■□□□□ 0.72
SEMA4D-220ENST00000492386 BTBD11A6QL63 1104 aa19.53■□□□□ 0.72
SEMA4D-220ENST00000492386 ZNF530Q6P9A1 599 aaPredicted RBP19.53■□□□□ 0.72
SEMA4D-220ENST00000492386 LRRC59Q96AG4 307 aaKnown RBP19.53■□□□□ 0.72
SEMA4D-220ENST00000492386 PDLIM2Q96JY6 352 aa19.53■□□□□ 0.72
SEMA4D-220ENST00000492386 ADGRL3Q9HAR2 1447 aa19.53■□□□□ 0.72
SEMA4D-220ENST00000492386 TEFQ10587 303 aa19.52■□□□□ 0.72
SEMA4D-220ENST00000492386 CNTROBQ8N137 903 aa19.52■□□□□ 0.72
SEMA4D-220ENST00000492386 KCNH5Q8NCM2 988 aa19.52■□□□□ 0.72
SEMA4D-220ENST00000492386 SNX14Q9Y5W7 946 aa19.52■□□□□ 0.72
SEMA4D-220ENST00000492386 MTX1Q13505 466 aa19.52■□□□□ 0.72
SEMA4D-220ENST00000492386 HSP90AB4PQ58FF6 505 aa19.52■□□□□ 0.72
SEMA4D-220ENST00000492386 MPRIPQ6WCQ1 1025 aa19.52■□□□□ 0.72
SEMA4D-220ENST00000492386 RBM33Q96EV2 1170 aaKnown RBP19.52■□□□□ 0.72
SEMA4D-220ENST00000492386 PXDNQ92626 1479 aa19.52■□□□□ 0.72
SEMA4D-220ENST00000492386 ZBTB7CA1YPR0 619 aa19.51■□□□□ 0.71
SEMA4D-220ENST00000492386 PSME1Q06323 249 aa19.51■□□□□ 0.71
SEMA4D-220ENST00000492386 PLEKHO1Q53GL0 409 aaPredicted RBP19.51■□□□□ 0.71
SEMA4D-220ENST00000492386 TTC14Q96N46 770 aa19.51■□□□□ 0.71
SEMA4D-220ENST00000492386 NCAPD2Q15021 1401 aa19.51■□□□□ 0.71
SEMA4D-220ENST00000492386 TTC41PQ6P2S7 1318 aa19.5■□□□□ 0.71
SEMA4D-220ENST00000492386 RASEFQ8IZ41 740 aa19.5■□□□□ 0.71
SEMA4D-220ENST00000492386 DBF4Q9UBU7 674 aaPredicted RBP19.5■□□□□ 0.71
SEMA4D-220ENST00000492386 TCHHQ07283 1943 aa19.5■□□□□ 0.71
SEMA4D-220ENST00000492386 RPAP1Q9BWH6 1393 aaPredicted RBP19.49■□□□□ 0.71
SEMA4D-220ENST00000492386 RNMTO43148 476 aaKnown RBP19.49■□□□□ 0.71
SEMA4D-220ENST00000492386 HS1BP3Q53T59 392 aa19.49■□□□□ 0.71
SEMA4D-220ENST00000492386 ESCO1Q5FWF5 840 aa19.49■□□□□ 0.71
SEMA4D-220ENST00000492386 WDR33Q9C0J8 1336 aaKnown RBP19.49■□□□□ 0.71
SEMA4D-220ENST00000492386 OVOS2A0A0G2JMS6 1433 aa19.49■□□□□ 0.71
SEMA4D-220ENST00000492386 HEG1Q9ULI3 1381 aa19.48■□□□□ 0.71
SEMA4D-220ENST00000492386 GLRX3O76003 335 aaKnown RBP19.48■□□□□ 0.71
SEMA4D-220ENST00000492386 AMOTQ4VCS5 1084 aa19.48■□□□□ 0.71
SEMA4D-220ENST00000492386 CWC27Q6UX04 472 aaKnown RBP19.48■□□□□ 0.71
SEMA4D-220ENST00000492386 SIPA1L3O60292 1781 aaPredicted RBP19.48■□□□□ 0.71
SEMA4D-220ENST00000492386 ALDH1L1O75891 902 aa19.48■□□□□ 0.71
SEMA4D-220ENST00000492386 PROSER3Q2NL68 480 aa19.48■□□□□ 0.71
SEMA4D-220ENST00000492386 MAP3K2Q9Y2U5 619 aa19.48■□□□□ 0.71
SEMA4D-220ENST00000492386 GIGYF1O75420 1035 aaPredicted RBP19.47■□□□□ 0.71
SEMA4D-220ENST00000492386 SLIT3O75094 1523 aa19.47■□□□□ 0.71
SEMA4D-220ENST00000492386 AK2P54819 239 aa19.47■□□□□ 0.71
SEMA4D-220ENST00000492386 OS9Q13438 667 aaPredicted RBP19.47■□□□□ 0.71
SEMA4D-220ENST00000492386 SPG7Q9UQ90 795 aa19.47■□□□□ 0.71
SEMA4D-220ENST00000492386 KIAA1211Q6ZU35 1233 aa19.46■□□□□ 0.71
SEMA4D-220ENST00000492386 RUFY3Q7L099 469 aa19.46■□□□□ 0.71
SEMA4D-220ENST00000492386 ANKLE2Q86XL3 938 aa19.46■□□□□ 0.71
SEMA4D-220ENST00000492386 CAMTA1Q9Y6Y1 1673 aa19.46■□□□□ 0.71
SEMA4D-220ENST00000492386 GADD45BO75293 160 aaPredicted RBP19.46■□□□□ 0.71
SEMA4D-220ENST00000492386 KSR2Q6VAB6 950 aa19.46■□□□□ 0.71
SEMA4D-220ENST00000492386 ARHGEF25Q86VW2 580 aa19.46■□□□□ 0.71
SEMA4D-220ENST00000492386 GDPD2Q9HCC8 539 aa19.46■□□□□ 0.71
SEMA4D-220ENST00000492386 FOXD4L6Q3SYB3 417 aaPredicted RBP19.45■□□□□ 0.7
SEMA4D-220ENST00000492386 C1orf141Q5JVX7 400 aa19.45■□□□□ 0.7
SEMA4D-220ENST00000492386 FOXD4L3Q6VB84 417 aaPredicted RBP19.45■□□□□ 0.7
SEMA4D-220ENST00000492386 USP48Q86UV5 1035 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms