RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 SOS1Q07889 1333 aaPredicted RBP17.04■□□□□ 0.32
TREX1-204ENST00000492235 FSTL1Q12841 308 aa17.04■□□□□ 0.32
TREX1-204ENST00000492235 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
TREX1-204ENST00000492235 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
TREX1-204ENST00000492235 KNSTRNQ9Y448 316 aa17.04■□□□□ 0.32
TREX1-204ENST00000492235 CLSPNQ9HAW4 1339 aa17.03■□□□□ 0.32
TREX1-204ENST00000492235 RASSF7Q02833 373 aa17.03■□□□□ 0.32
TREX1-204ENST00000492235 KLRG1Q96E93 195 aa17.03■□□□□ 0.32
TREX1-204ENST00000492235 CYP19A1P11511 503 aaPredicted RBP17.02■□□□□ 0.32
TREX1-204ENST00000492235 NFIXQ14938 502 aa17.02■□□□□ 0.32
TREX1-204ENST00000492235 TNS4Q8IZW8 715 aa17.02■□□□□ 0.32
TREX1-204ENST00000492235 COL15A1P39059 1388 aa17.02■□□□□ 0.31
TREX1-204ENST00000492235 MRC1P22897 1456 aa17.01■□□□□ 0.31
TREX1-204ENST00000492235 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
TREX1-204ENST00000492235 HMOX1P09601 288 aa17.01■□□□□ 0.31
TREX1-204ENST00000492235 NARFQ9UHQ1 456 aa17.01■□□□□ 0.31
TREX1-204ENST00000492235 ZBTB1Q9Y2K1 713 aa17.01■□□□□ 0.31
TREX1-204ENST00000492235 NRXN2Q9P2S2 1712 aa17■□□□□ 0.31
TREX1-204ENST00000492235 DLEC1Q9Y238 1755 aa17■□□□□ 0.31
TREX1-204ENST00000492235 SERPINB2P05120 415 aa16.98■□□□□ 0.31
TREX1-204ENST00000492235 PRELPP51888 382 aa16.98■□□□□ 0.31
TREX1-204ENST00000492235 JMYQ8N9B5 988 aa16.98■□□□□ 0.31
TREX1-204ENST00000492235 SMC1BQ8NDV3 1235 aa16.98■□□□□ 0.31
TREX1-204ENST00000492235 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
TREX1-204ENST00000492235 CCDC88AQ3V6T2 1871 aa16.98■□□□□ 0.31
TREX1-204ENST00000492235 LMNB1P20700 586 aa16.97■□□□□ 0.31
TREX1-204ENST00000492235 CANXP27824 592 aaKnown RBP16.97■□□□□ 0.31
TREX1-204ENST00000492235 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
TREX1-204ENST00000492235 AMER1Q5JTC6 1135 aaPredicted RBP16.97■□□□□ 0.31
TREX1-204ENST00000492235 ZC3H4Q9UPT8 1303 aaKnown RBP16.96■□□□□ 0.31
TREX1-204ENST00000492235 TIAM2Q8IVF5 1701 aa16.96■□□□□ 0.31
TREX1-204ENST00000492235 BICDL1Q6ZP65 573 aa16.96■□□□□ 0.31
TREX1-204ENST00000492235 C2CD5Q86YS7 1000 aa16.96■□□□□ 0.31
TREX1-204ENST00000492235 TTLL6Q8N841 843 aa16.96■□□□□ 0.31
TREX1-204ENST00000492235 CARMIL3Q8ND23 1372 aa16.96■□□□□ 0.31
TREX1-204ENST00000492235 UBR2Q8IWV8 1755 aa16.96■□□□□ 0.31
TREX1-204ENST00000492235 GLTPD2A6NH11 291 aa16.95■□□□□ 0.3
TREX1-204ENST00000492235 H0YIN7 160 aa16.94■□□□□ 0.3
TREX1-204ENST00000492235 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
TREX1-204ENST00000492235 VEGFAP15692 232 aaPredicted RBP16.93■□□□□ 0.3
TREX1-204ENST00000492235 NFKBIEO00221 500 aa16.92■□□□□ 0.3
TREX1-204ENST00000492235 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
TREX1-204ENST00000492235 STARD3NLO95772 234 aa16.92■□□□□ 0.3
TREX1-204ENST00000492235 TTC5Q8N0Z6 440 aa16.92■□□□□ 0.3
TREX1-204ENST00000492235 ANKRD31Q8N7Z5 1873 aa16.92■□□□□ 0.3
TREX1-204ENST00000492235 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
TREX1-204ENST00000492235 TBC1D9BQ66K14 1250 aa16.91■□□□□ 0.3
TREX1-204ENST00000492235 ZNF219Q9P2Y4 722 aaPredicted RBP16.91■□□□□ 0.3
TREX1-204ENST00000492235 ZNF330Q9Y3S2 320 aaPredicted RBP16.91■□□□□ 0.3
TREX1-204ENST00000492235 A0A087WZG4 1122 aa16.9■□□□□ 0.3
TREX1-204ENST00000492235 CC2D1BQ5T0F9 858 aaKnown RBP16.9■□□□□ 0.3
TREX1-204ENST00000492235 CCDC24Q8N4L8 307 aa16.9■□□□□ 0.3
TREX1-204ENST00000492235 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.3
TREX1-204ENST00000492235 ZNF496Q96IT1 587 aaPredicted RBP16.9■□□□□ 0.3
TREX1-204ENST00000492235 SCN7AQ01118 1682 aa16.9■□□□□ 0.3
TREX1-204ENST00000492235 KIF7Q2M1P5 1343 aa16.9■□□□□ 0.3
TREX1-204ENST00000492235 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
TREX1-204ENST00000492235 TBC1D2BQ9UPU7 963 aa16.89■□□□□ 0.29
TREX1-204ENST00000492235 PCNTO95613 3336 aa16.88■□□□□ 0.29
TREX1-204ENST00000492235 C21orf2O43822 256 aa16.88■□□□□ 0.29
TREX1-204ENST00000492235 TEFQ10587 303 aa16.88■□□□□ 0.29
TREX1-204ENST00000492235 HEG1Q9ULI3 1381 aa16.88■□□□□ 0.29
TREX1-204ENST00000492235 DICER1Q9UPY3 1922 aaKnown RBP16.88■□□□□ 0.29
TREX1-204ENST00000492235 SIPA1L3O60292 1781 aaPredicted RBP16.87■□□□□ 0.29
TREX1-204ENST00000492235 CACNA1SQ13698 1873 aa16.87■□□□□ 0.29
TREX1-204ENST00000492235 FER1L6Q2WGJ9 1857 aa16.87■□□□□ 0.29
TREX1-204ENST00000492235 POTECB2RU33 542 aa16.87■□□□□ 0.29
TREX1-204ENST00000492235 PDE6BP35913 854 aa16.87■□□□□ 0.29
TREX1-204ENST00000492235 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
TREX1-204ENST00000492235 PRR5LQ6MZQ0 368 aa16.87■□□□□ 0.29
TREX1-204ENST00000492235 DPY19L2Q6NUT2 758 aa16.87■□□□□ 0.29
TREX1-204ENST00000492235 ZNF790Q6PG37 636 aa16.87■□□□□ 0.29
TREX1-204ENST00000492235 IL17REQ8NFR9 667 aa16.87■□□□□ 0.29
TREX1-204ENST00000492235 BRIP1Q9BX63 1249 aa16.87■□□□□ 0.29
TREX1-204ENST00000492235 U2SURPO15042 1029 aaKnown RBP16.86■□□□□ 0.29
TREX1-204ENST00000492235 PER1O15534 1290 aaPredicted RBP16.86■□□□□ 0.29
TREX1-204ENST00000492235 HSPA1AP0DMV8 641 aaKnown RBP16.86■□□□□ 0.29
TREX1-204ENST00000492235 HSPA1BP0DMV9 641 aaKnown RBP16.86■□□□□ 0.29
TREX1-204ENST00000492235 ERFEQ4G0M1 354 aa16.86■□□□□ 0.29
TREX1-204ENST00000492235 CCER1Q8TC90 406 aaPredicted RBP16.86■□□□□ 0.29
TREX1-204ENST00000492235 TEX13AQ9BXU3 409 aaPredicted RBP16.86■□□□□ 0.29
TREX1-204ENST00000492235 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
TREX1-204ENST00000492235 PDZRN3Q9UPQ7 1066 aa16.85■□□□□ 0.29
TREX1-204ENST00000492235 COL3A1P02461 1466 aaPredicted RBP16.85■□□□□ 0.29
TREX1-204ENST00000492235 NPHP1O15259 732 aa16.84■□□□□ 0.29
TREX1-204ENST00000492235 A1BGP04217 495 aa16.84■□□□□ 0.29
TREX1-204ENST00000492235 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
TREX1-204ENST00000492235 GAS2L2Q8NHY3 880 aa16.84■□□□□ 0.29
TREX1-204ENST00000492235 NPM2Q86SE8 214 aaKnown RBP16.83■□□□□ 0.28
TREX1-204ENST00000492235 SLX4Q8IY92 1834 aa16.83■□□□□ 0.28
TREX1-204ENST00000492235 CNBD1Q8NA66 436 aa16.83■□□□□ 0.28
TREX1-204ENST00000492235 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.28
TREX1-204ENST00000492235 SETDB2Q96T68 719 aa16.83■□□□□ 0.28
TREX1-204ENST00000492235 TAOK3Q9H2K8 898 aa16.83■□□□□ 0.28
TREX1-204ENST00000492235 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
TREX1-204ENST00000492235 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
TREX1-204ENST00000492235 KCNQ3O43525 872 aa16.81■□□□□ 0.28
TREX1-204ENST00000492235 ST5P78524 1137 aa16.81■□□□□ 0.28
TREX1-204ENST00000492235 PRPF40BQ6NWY9 871 aaKnown RBP16.81■□□□□ 0.28
TREX1-204ENST00000492235 CNKSR1Q969H4 720 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms