RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 EIF4G2P78344 907 aaKnown RBP eCLIP7.78□□□□□ -1.16
VTA1-204ENST00000491881 SLFNL1Q499Z3 407 aa7.78□□□□□ -1.16
VTA1-204ENST00000491881 OXLD1Q5BKU9 147 aa7.78□□□□□ -1.16
VTA1-204ENST00000491881 CD163Q86VB7 1156 aa7.78□□□□□ -1.16
VTA1-204ENST00000491881 SIRT1Q96EB6 747 aa7.78□□□□□ -1.16
VTA1-204ENST00000491881 ZCCHC2Q9C0B9 1178 aaKnown RBP7.78□□□□□ -1.16
VTA1-204ENST00000491881 DGKGP49619 791 aa7.77□□□□□ -1.17
VTA1-204ENST00000491881 C1orf216Q8TAB5 229 aa7.77□□□□□ -1.17
VTA1-204ENST00000491881 AIDAQ96BJ3 306 aa7.77□□□□□ -1.17
VTA1-204ENST00000491881 ATXN7O15265 892 aaPredicted RBP7.76□□□□□ -1.17
VTA1-204ENST00000491881 CHRNA4P43681 627 aa7.76□□□□□ -1.17
VTA1-204ENST00000491881 CHSY3Q70JA7 882 aa7.76□□□□□ -1.17
VTA1-204ENST00000491881 NLRP8Q86W28 1048 aa7.76□□□□□ -1.17
VTA1-204ENST00000491881 WWC1Q8IX03 1113 aa7.76□□□□□ -1.17
VTA1-204ENST00000491881 PHTF2Q8N3S3 785 aa7.76□□□□□ -1.17
VTA1-204ENST00000491881 POM121Q96HA1 1249 aa7.76□□□□□ -1.17
VTA1-204ENST00000491881 DNAAF2Q9NVR5 837 aaKnown RBP7.76□□□□□ -1.17
VTA1-204ENST00000491881 COG6Q9Y2V7 657 aa7.76□□□□□ -1.17
VTA1-204ENST00000491881 A6NJR5 290 aa7.75□□□□□ -1.17
VTA1-204ENST00000491881 ATP4AP20648 1035 aa7.75□□□□□ -1.17
VTA1-204ENST00000491881 ADH6P28332 368 aa7.75□□□□□ -1.17
VTA1-204ENST00000491881 PROSER2Q86WR7 435 aaPredicted RBP7.75□□□□□ -1.17
VTA1-204ENST00000491881 NIFKQ9BYG3 293 aaKnown RBP7.75□□□□□ -1.17
VTA1-204ENST00000491881 GDPD2Q9HCC8 539 aa7.75□□□□□ -1.17
VTA1-204ENST00000491881 DCDC2BA2VCK2 349 aa7.74□□□□□ -1.17
VTA1-204ENST00000491881 INHAP05111 366 aa7.74□□□□□ -1.17
VTA1-204ENST00000491881 ABL2P42684 1182 aa7.74□□□□□ -1.17
VTA1-204ENST00000491881 GDF10P55107 478 aa7.74□□□□□ -1.17
VTA1-204ENST00000491881 ARSJQ5FYB0 599 aaPredicted RBP7.74□□□□□ -1.17
VTA1-204ENST00000491881 TBC1D2BQ9UPU7 963 aa7.74□□□□□ -1.17
VTA1-204ENST00000491881 SUPT5HO00267 1087 aaKnown RBP7.73□□□□□ -1.17
VTA1-204ENST00000491881 MAPTP10636 758 aaKnown RBP7.73□□□□□ -1.17
VTA1-204ENST00000491881 CD33P20138 364 aa7.73□□□□□ -1.17
VTA1-204ENST00000491881 A0A1W2PNR3 127 aa7.72□□□□□ -1.17
VTA1-204ENST00000491881 KHNYNO15037 678 aaKnown RBP7.72□□□□□ -1.17
VTA1-204ENST00000491881 SCNN1DP51172 638 aa7.72□□□□□ -1.17
VTA1-204ENST00000491881 TNP2Q05952 138 aa7.72□□□□□ -1.17
VTA1-204ENST00000491881 NBPF1Q3BBV0 1214 aa7.72□□□□□ -1.17
VTA1-204ENST00000491881 FAM182BQ5T319 152 aa7.72□□□□□ -1.17
VTA1-204ENST00000491881 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
VTA1-204ENST00000491881 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
VTA1-204ENST00000491881 SMTNP53814 917 aa7.71□□□□□ -1.18
VTA1-204ENST00000491881 DOC2BQ14184 412 aa7.71□□□□□ -1.18
VTA1-204ENST00000491881 FCHSD1Q86WN1 690 aa7.71□□□□□ -1.18
VTA1-204ENST00000491881 SEMA6BQ9H3T3 888 aa7.71□□□□□ -1.18
VTA1-204ENST00000491881 KLF15Q9UIH9 416 aa7.71□□□□□ -1.18
VTA1-204ENST00000491881 GJA3Q9Y6H8 435 aa7.71□□□□□ -1.18
VTA1-204ENST00000491881 TATP17735 454 aaPredicted RBP7.7□□□□□ -1.18
VTA1-204ENST00000491881 SERTAD1Q9UHV2 236 aa7.7□□□□□ -1.18
VTA1-204ENST00000491881 CHIC2Q9UKJ5 165 aa7.7□□□□□ -1.18
VTA1-204ENST00000491881 PRR12Q9ULL5 1215 aa7.7□□□□□ -1.18
VTA1-204ENST00000491881 PCBP4P57723 403 aaKnown RBP7.69□□□□□ -1.18
VTA1-204ENST00000491881 PLVAPQ9BX97 442 aa7.69□□□□□ -1.18
VTA1-204ENST00000491881 HCN2Q9UL51 889 aa7.69□□□□□ -1.18
VTA1-204ENST00000491881 SPATA31C1P0DKV0 1188 aa7.68□□□□□ -1.18
VTA1-204ENST00000491881 GATA4P43694 442 aa7.68□□□□□ -1.18
VTA1-204ENST00000491881 VAC14Q08AM6 782 aa7.68□□□□□ -1.18
VTA1-204ENST00000491881 IRF5Q13568 498 aa7.68□□□□□ -1.18
VTA1-204ENST00000491881 MAP7D1Q3KQU3 841 aa7.68□□□□□ -1.18
VTA1-204ENST00000491881 TRIM11Q96F44 468 aa7.68□□□□□ -1.18
VTA1-204ENST00000491881 ZDHHC3Q9NYG2 299 aa7.68□□□□□ -1.18
VTA1-204ENST00000491881 FAM157BP0CG42 384 aa7.67□□□□□ -1.18
VTA1-204ENST00000491881 ITGB7P26010 798 aa7.67□□□□□ -1.18
VTA1-204ENST00000491881 ZNF468Q5VIY5 522 aaPredicted RBP7.67□□□□□ -1.18
VTA1-204ENST00000491881 BICDL1Q6ZP65 573 aa7.67□□□□□ -1.18
VTA1-204ENST00000491881 FNBP4Q8N3X1 1017 aaPredicted RBP7.67□□□□□ -1.18
VTA1-204ENST00000491881 PLPP7Q8NBV4 271 aa7.67□□□□□ -1.18
VTA1-204ENST00000491881 ZIC5Q96T25 663 aa7.67□□□□□ -1.18
VTA1-204ENST00000491881 CABP1Q9NZU7 370 aa7.67□□□□□ -1.18
VTA1-204ENST00000491881 MARK1Q9P0L2 795 aa7.67□□□□□ -1.18
VTA1-204ENST00000491881 A6NJY4 79 aa7.66□□□□□ -1.18
VTA1-204ENST00000491881 ARID3CA6NKF2 412 aa7.66□□□□□ -1.18
VTA1-204ENST00000491881 CDK2AP1O14519 115 aa7.66□□□□□ -1.18
VTA1-204ENST00000491881 WASHC4Q2M389 1173 aa7.66□□□□□ -1.18
VTA1-204ENST00000491881 ZMYM1Q5SVZ6 1142 aa7.66□□□□□ -1.18
VTA1-204ENST00000491881 PSMG3-AS1Q96PY0 264 aa7.66□□□□□ -1.18
VTA1-204ENST00000491881 ALAS2P22557 587 aa7.65□□□□□ -1.18
VTA1-204ENST00000491881 MTFR1Q15390 333 aa7.65□□□□□ -1.18
VTA1-204ENST00000491881 SLC4A9Q96Q91 983 aa7.65□□□□□ -1.18
VTA1-204ENST00000491881 ZNF777Q9ULD5 760 aaPredicted RBP7.65□□□□□ -1.18
VTA1-204ENST00000491881 IQSEC3Q9UPP2 1182 aaPredicted RBP7.65□□□□□ -1.18
VTA1-204ENST00000491881 ELOA3CA0A087WX78 387 aaPredicted RBP7.64□□□□□ -1.19
VTA1-204ENST00000491881 SPDYE3A6NKU9 549 aa7.64□□□□□ -1.19
VTA1-204ENST00000491881 ELOA3DA6NLF2 546 aaPredicted RBP7.64□□□□□ -1.19
VTA1-204ENST00000491881 TMEM229AB2RXF0 380 aa7.64□□□□□ -1.19
VTA1-204ENST00000491881 ELOA3BQ3SY89 546 aa7.64□□□□□ -1.19
VTA1-204ENST00000491881 SAMD5Q5TGI4 173 aa7.64□□□□□ -1.19
VTA1-204ENST00000491881 ZNF295-AS1Q8N0V1 137 aa7.64□□□□□ -1.19
VTA1-204ENST00000491881 ELOA3Q8NG57 546 aa7.64□□□□□ -1.19
VTA1-204ENST00000491881 STRN4Q9NRL3 753 aa7.64□□□□□ -1.19
VTA1-204ENST00000491881 USP3Q9Y6I4 520 aa7.64□□□□□ -1.19
VTA1-204ENST00000491881 SEMA3FQ13275 785 aa7.63□□□□□ -1.19
VTA1-204ENST00000491881 LAMC2Q13753 1193 aa7.63□□□□□ -1.19
VTA1-204ENST00000491881 PRRT3Q5FWE3 981 aa7.63□□□□□ -1.19
VTA1-204ENST00000491881 PARP3Q9Y6F1 533 aa7.63□□□□□ -1.19
VTA1-204ENST00000491881 APBA3O96018 575 aa7.62□□□□□ -1.19
VTA1-204ENST00000491881 SYT9Q86SS6 491 aa7.62□□□□□ -1.19
VTA1-204ENST00000491881 SCO2A0A1W2PP80 73 aa7.61□□□□□ -1.19
VTA1-204ENST00000491881 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.61□□□□□ -1.19
VTA1-204ENST00000491881 BACH1O14867 736 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms