RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 ZPR1O75312 459 aa18.02■□□□□ 0.48
CDK9-204ENST00000491521 CANXP27824 592 aaKnown RBP18.02■□□□□ 0.48
CDK9-204ENST00000491521 ZBTB1Q9Y2K1 713 aa18.02■□□□□ 0.48
CDK9-204ENST00000491521 SOS1Q07889 1333 aaPredicted RBP18.01■□□□□ 0.47
CDK9-204ENST00000491521 USPL1Q5W0Q7 1092 aa18.01■□□□□ 0.47
CDK9-204ENST00000491521 MCM10Q7L590 875 aa18.01■□□□□ 0.47
CDK9-204ENST00000491521 RTF1Q92541 710 aaKnown RBP18.01■□□□□ 0.47
CDK9-204ENST00000491521 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
CDK9-204ENST00000491521 A0A0G2JLW4 131 aa18■□□□□ 0.47
CDK9-204ENST00000491521 FCHSD2O94868 740 aa18■□□□□ 0.47
CDK9-204ENST00000491521 ZNF790Q6PG37 636 aa18■□□□□ 0.47
CDK9-204ENST00000491521 ZNF330Q9Y3S2 320 aaPredicted RBP18■□□□□ 0.47
CDK9-204ENST00000491521 BTBD11A6QL63 1104 aa17.99■□□□□ 0.47
CDK9-204ENST00000491521 KCNQ3O43525 872 aa17.99■□□□□ 0.47
CDK9-204ENST00000491521 STARD3NLO95772 234 aa17.99■□□□□ 0.47
CDK9-204ENST00000491521 DCTN1Q14203 1278 aa17.99■□□□□ 0.47
CDK9-204ENST00000491521 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
CDK9-204ENST00000491521 KIF13BQ9NQT8 1826 aa17.99■□□□□ 0.47
CDK9-204ENST00000491521 COL15A1P39059 1388 aa17.99■□□□□ 0.47
CDK9-204ENST00000491521 PXDNLA1KZ92 1463 aa17.99■□□□□ 0.47
CDK9-204ENST00000491521 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
CDK9-204ENST00000491521 DDR1Q08345 913 aa17.98■□□□□ 0.47
CDK9-204ENST00000491521 ADAMTS8Q9UP79 889 aa17.98■□□□□ 0.47
CDK9-204ENST00000491521 CEMIPQ8WUJ3 1361 aa17.97■□□□□ 0.47
CDK9-204ENST00000491521 HEG1Q9ULI3 1381 aa17.97■□□□□ 0.47
CDK9-204ENST00000491521 DPEP1P16444 411 aa17.97■□□□□ 0.47
CDK9-204ENST00000491521 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
CDK9-204ENST00000491521 KIAA1551Q9HCM1 1747 aa17.96■□□□□ 0.47
CDK9-204ENST00000491521 NEFMP07197 916 aa17.96■□□□□ 0.47
CDK9-204ENST00000491521 BCS1LQ9Y276 419 aa17.96■□□□□ 0.47
CDK9-204ENST00000491521 TGFB2P61812 414 aa17.95■□□□□ 0.46
CDK9-204ENST00000491521 NARFQ9UHQ1 456 aa17.95■□□□□ 0.46
CDK9-204ENST00000491521 POLRMTO00411 1230 aaKnown RBP17.94■□□□□ 0.46
CDK9-204ENST00000491521 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
CDK9-204ENST00000491521 A1BGP04217 495 aa17.93■□□□□ 0.46
CDK9-204ENST00000491521 PIP4K2AP48426 406 aaPredicted RBP17.93■□□□□ 0.46
CDK9-204ENST00000491521 ZNF526Q8TF50 670 aaPredicted RBP17.93■□□□□ 0.46
CDK9-204ENST00000491521 TEX13AQ9BXU3 409 aaPredicted RBP17.93■□□□□ 0.46
CDK9-204ENST00000491521 DLG5Q8TDM6 1919 aa17.93■□□□□ 0.46
CDK9-204ENST00000491521 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
CDK9-204ENST00000491521 TM4SF1P30408 202 aa17.92■□□□□ 0.46
CDK9-204ENST00000491521 NFIXQ14938 502 aa17.92■□□□□ 0.46
CDK9-204ENST00000491521 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
CDK9-204ENST00000491521 PNNQ9H307 717 aaKnown RBP17.92■□□□□ 0.46
CDK9-204ENST00000491521 MIS18AQ9NYP9 233 aa17.92■□□□□ 0.46
CDK9-204ENST00000491521 TBC1D2BQ9UPU7 963 aa17.92■□□□□ 0.46
CDK9-204ENST00000491521 AFDNP55196 1824 aaKnown RBP17.92■□□□□ 0.46
CDK9-204ENST00000491521 ATP10DQ9P241 1426 aa17.91■□□□□ 0.46
CDK9-204ENST00000491521 A0A087WZG4 1122 aa17.91■□□□□ 0.46
CDK9-204ENST00000491521 CHRNA5P30532 468 aa17.91■□□□□ 0.46
CDK9-204ENST00000491521 EIF5P55010 431 aaKnown RBP17.91■□□□□ 0.46
CDK9-204ENST00000491521 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
CDK9-204ENST00000491521 CCDC146Q8IYE0 955 aa17.91■□□□□ 0.46
CDK9-204ENST00000491521 BCL2L12Q9HB09 334 aa17.91■□□□□ 0.46
CDK9-204ENST00000491521 MAPK8IP3Q9UPT6 1336 aa17.91■□□□□ 0.46
CDK9-204ENST00000491521 ARHGAP27Q6ZUM4 889 aa17.9■□□□□ 0.46
CDK9-204ENST00000491521 BRCA1P38398 1863 aaKnown RBP17.89■□□□□ 0.45
CDK9-204ENST00000491521 HTATSF1O43719 755 aaKnown RBP17.89■□□□□ 0.45
CDK9-204ENST00000491521 GIGYF1O75420 1035 aaPredicted RBP17.89■□□□□ 0.45
CDK9-204ENST00000491521 PLEKHF1Q96S99 279 aa17.89■□□□□ 0.45
CDK9-204ENST00000491521 THUMPD2Q9BTF0 503 aaKnown RBP17.89■□□□□ 0.45
CDK9-204ENST00000491521 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
CDK9-204ENST00000491521 SERPINB2P05120 415 aa17.88■□□□□ 0.45
CDK9-204ENST00000491521 KCNA3P22001 575 aa17.88■□□□□ 0.45
CDK9-204ENST00000491521 TAF7Q15545 349 aaPredicted RBP17.88■□□□□ 0.45
CDK9-204ENST00000491521 NFE2L2Q16236 605 aa17.88■□□□□ 0.45
CDK9-204ENST00000491521 PIM2Q9P1W9 311 aa17.88■□□□□ 0.45
CDK9-204ENST00000491521 SNRPA1P09661 255 aaKnown RBP17.87■□□□□ 0.45
CDK9-204ENST00000491521 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
CDK9-204ENST00000491521 DALRD3Q5D0E6 543 aaKnown RBP17.87■□□□□ 0.45
CDK9-204ENST00000491521 TBC1D9BQ66K14 1250 aa17.87■□□□□ 0.45
CDK9-204ENST00000491521 RUNDC1Q96C34 613 aa17.87■□□□□ 0.45
CDK9-204ENST00000491521 SCN7AQ01118 1682 aa17.87■□□□□ 0.45
CDK9-204ENST00000491521 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
CDK9-204ENST00000491521 CCDC24Q8N4L8 307 aa17.86■□□□□ 0.45
CDK9-204ENST00000491521 HNRNPUQ00839 825 aaKnown RBP eCLIP17.85■□□□□ 0.45
CDK9-204ENST00000491521 DZIP3Q86Y13 1208 aaKnown RBP17.85■□□□□ 0.45
CDK9-204ENST00000491521 GPBP1L1Q9HC44 474 aaPredicted RBP17.85■□□□□ 0.45
CDK9-204ENST00000491521 ADCY9O60503 1353 aa17.84■□□□□ 0.45
CDK9-204ENST00000491521 CARMIL3Q8ND23 1372 aa17.84■□□□□ 0.45
CDK9-204ENST00000491521 NPHP1O15259 732 aa17.84■□□□□ 0.45
CDK9-204ENST00000491521 C1QTNF8P60827 252 aa17.84■□□□□ 0.45
CDK9-204ENST00000491521 ARFGEF1Q9Y6D6 1849 aa17.84■□□□□ 0.45
CDK9-204ENST00000491521 NRXN2Q9P2S2 1712 aa17.84■□□□□ 0.45
CDK9-204ENST00000491521 CAMTA2O94983 1202 aa17.83■□□□□ 0.44
CDK9-204ENST00000491521 C2CD5Q86YS7 1000 aa17.83■□□□□ 0.44
CDK9-204ENST00000491521 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
CDK9-204ENST00000491521 KDM3BQ7LBC6 1761 aa17.82■□□□□ 0.44
CDK9-204ENST00000491521 APAF1O14727 1248 aa17.82■□□□□ 0.44
CDK9-204ENST00000491521 RRP7AQ9Y3A4 280 aaKnown RBP17.82■□□□□ 0.44
CDK9-204ENST00000491521 BCORQ6W2J9 1755 aa17.81■□□□□ 0.44
CDK9-204ENST00000491521 RIPK4P57078 832 aa17.81■□□□□ 0.44
CDK9-204ENST00000491521 NEUROD2Q15784 382 aa17.81■□□□□ 0.44
CDK9-204ENST00000491521 NGEFQ8N5V2 710 aa17.81■□□□□ 0.44
CDK9-204ENST00000491521 SETDB2Q96T68 719 aa17.81■□□□□ 0.44
CDK9-204ENST00000491521 NBPF26B4DH59 902 aa17.8■□□□□ 0.44
CDK9-204ENST00000491521 C9orf131Q5VYM1 1079 aa17.8■□□□□ 0.44
CDK9-204ENST00000491521 NBPF10Q6P3W6 841 aaKnown RBP17.8■□□□□ 0.44
CDK9-204ENST00000491521 NBPF15Q8N660 670 aa17.8■□□□□ 0.44
CDK9-204ENST00000491521 LAMB4A4D0S4 1761 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms