RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 PASKQ96RG2 1323 aa15.42■□□□□ 0.06
CLCNKA-206ENST00000491433 DLL1O00548 723 aa15.41■□□□□ 0.06
CLCNKA-206ENST00000491433 DEFB115Q30KQ5 88 aa15.41■□□□□ 0.06
CLCNKA-206ENST00000491433 SBF1O95248 1867 aa15.41■□□□□ 0.06
CLCNKA-206ENST00000491433 WDR33Q9C0J8 1336 aaKnown RBP15.41■□□□□ 0.06
CLCNKA-206ENST00000491433 RASSF10A6NK89 507 aa15.4■□□□□ 0.06
CLCNKA-206ENST00000491433 CABP4P57796 275 aa15.39■□□□□ 0.05
CLCNKA-206ENST00000491433 RASSF7Q02833 373 aa15.39■□□□□ 0.05
CLCNKA-206ENST00000491433 AMOTQ4VCS5 1084 aa15.39■□□□□ 0.05
CLCNKA-206ENST00000491433 PLEKHO1Q53GL0 409 aaPredicted RBP15.39■□□□□ 0.05
CLCNKA-206ENST00000491433 MYH14Q7Z406 1995 aaKnown RBP15.38■□□□□ 0.05
CLCNKA-206ENST00000491433 DGKZQ13574 1117 aa15.38■□□□□ 0.05
CLCNKA-206ENST00000491433 SLC4A9Q96Q91 983 aa15.38■□□□□ 0.05
CLCNKA-206ENST00000491433 CARD14Q9BXL6 1004 aa15.38■□□□□ 0.05
CLCNKA-206ENST00000491433 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
CLCNKA-206ENST00000491433 USP42Q9H9J4 1324 aaKnown RBP15.38■□□□□ 0.05
CLCNKA-206ENST00000491433 SOX10P56693 466 aa15.37■□□□□ 0.05
CLCNKA-206ENST00000491433 POLKQ9UBT6 870 aa15.37■□□□□ 0.05
CLCNKA-206ENST00000491433 CRKLP46109 303 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-206ENST00000491433 EIF4A2Q14240 407 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-206ENST00000491433 HABP4Q5JVS0 413 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-206ENST00000491433 ZPR1O75312 459 aa15.35■□□□□ 0.05
CLCNKA-206ENST00000491433 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
CLCNKA-206ENST00000491433 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
CLCNKA-206ENST00000491433 C1orf141Q5JVX7 400 aa15.35■□□□□ 0.05
CLCNKA-206ENST00000491433 MTHFSP49914 203 aa15.34■□□□□ 0.05
CLCNKA-206ENST00000491433 FKBP8Q14318 412 aa15.34■□□□□ 0.05
CLCNKA-206ENST00000491433 ZNF530Q6P9A1 599 aaPredicted RBP15.34■□□□□ 0.05
CLCNKA-206ENST00000491433 LDHDQ86WU2 507 aa15.34■□□□□ 0.05
CLCNKA-206ENST00000491433 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
CLCNKA-206ENST00000491433 PTCD1O75127 700 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-206ENST00000491433 CHRNA5P30532 468 aa15.33■□□□□ 0.04
CLCNKA-206ENST00000491433 DDR1Q08345 913 aa15.33■□□□□ 0.04
CLCNKA-206ENST00000491433 TSKSQ9UJT2 592 aa15.33■□□□□ 0.04
CLCNKA-206ENST00000491433 POLRMTO00411 1230 aaKnown RBP15.32■□□□□ 0.04
CLCNKA-206ENST00000491433 CA12O43570 354 aa15.32■□□□□ 0.04
CLCNKA-206ENST00000491433 TM4SF1P30408 202 aa15.32■□□□□ 0.04
CLCNKA-206ENST00000491433 SRP68Q9UHB9 627 aaKnown RBP15.32■□□□□ 0.04
CLCNKA-206ENST00000491433 ABT1Q9ULW3 272 aaKnown RBP15.32■□□□□ 0.04
CLCNKA-206ENST00000491433 ECE1P42892 770 aa15.31■□□□□ 0.04
CLCNKA-206ENST00000491433 ITGBL1O95965 494 aaPredicted RBP15.3■□□□□ 0.04
CLCNKA-206ENST00000491433 TJP1Q07157 1748 aa15.3■□□□□ 0.04
CLCNKA-206ENST00000491433 CCDC88AQ3V6T2 1871 aa15.3■□□□□ 0.04
CLCNKA-206ENST00000491433 TIAM2Q8IVF5 1701 aa15.3■□□□□ 0.04
CLCNKA-206ENST00000491433 TTLL6Q8N841 843 aa15.3■□□□□ 0.04
CLCNKA-206ENST00000491433 NFATC2IPQ8NCF5 419 aa15.3■□□□□ 0.04
CLCNKA-206ENST00000491433 DLEC1Q9Y238 1755 aa15.3■□□□□ 0.04
CLCNKA-206ENST00000491433 IQCA1LA6NCM1 817 aa15.29■□□□□ 0.04
CLCNKA-206ENST00000491433 PAXIP1Q6ZW49 1069 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-206ENST00000491433 GPR101Q96P66 508 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-206ENST00000491433 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
CLCNKA-206ENST00000491433 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-206ENST00000491433 USPL1Q5W0Q7 1092 aa15.28■□□□□ 0.04
CLCNKA-206ENST00000491433 CAPNS2Q96L46 248 aa15.28■□□□□ 0.04
CLCNKA-206ENST00000491433 PDZRN3Q9UPQ7 1066 aa15.28■□□□□ 0.04
CLCNKA-206ENST00000491433 SCN11AQ9UI33 1791 aa15.28■□□□□ 0.04
CLCNKA-206ENST00000491433 NRXN2Q9P2S2 1712 aa15.28■□□□□ 0.04
CLCNKA-206ENST00000491433 ADAMTS7Q9UKP4 1686 aa15.28■□□□□ 0.04
CLCNKA-206ENST00000491433 H0YIN7 160 aa15.27■□□□□ 0.04
CLCNKA-206ENST00000491433 TNNT2P45379 298 aaPredicted RBP15.27■□□□□ 0.04
CLCNKA-206ENST00000491433 INTS5Q6P9B9 1019 aaKnown RBP15.27■□□□□ 0.04
CLCNKA-206ENST00000491433 NARFQ9UHQ1 456 aa15.27■□□□□ 0.04
CLCNKA-206ENST00000491433 THSD7BQ9C0I4 1608 aa15.27■□□□□ 0.03
CLCNKA-206ENST00000491433 SOS1Q07889 1333 aaPredicted RBP15.26■□□□□ 0.03
CLCNKA-206ENST00000491433 GRM1Q13255 1194 aa15.26■□□□□ 0.03
CLCNKA-206ENST00000491433 SERPINB2P05120 415 aa15.25■□□□□ 0.03
CLCNKA-206ENST00000491433 CUL9Q8IWT3 2517 aa15.25■□□□□ 0.03
CLCNKA-206ENST00000491433 DICER1Q9UPY3 1922 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-206ENST00000491433 COL15A1P39059 1388 aa15.24■□□□□ 0.03
CLCNKA-206ENST00000491433 FXR1P51114 621 aaKnown RBP eCLIP15.24■□□□□ 0.03
CLCNKA-206ENST00000491433 NFIXQ14938 502 aa15.24■□□□□ 0.03
CLCNKA-206ENST00000491433 ERFEQ4G0M1 354 aa15.24■□□□□ 0.03
CLCNKA-206ENST00000491433 C2CD5Q86YS7 1000 aa15.24■□□□□ 0.03
CLCNKA-206ENST00000491433 DNAJC10Q8IXB1 793 aa15.24■□□□□ 0.03
CLCNKA-206ENST00000491433 LTBP1Q14766 1721 aa15.23■□□□□ 0.03
CLCNKA-206ENST00000491433 MAP2K2P36507 400 aa15.23■□□□□ 0.03
CLCNKA-206ENST00000491433 AKAP4Q5JQC9 854 aa15.23■□□□□ 0.03
CLCNKA-206ENST00000491433 SLC52A2Q9HAB3 445 aa15.23■□□□□ 0.03
CLCNKA-206ENST00000491433 NFKBIEO00221 500 aa15.22■□□□□ 0.03
CLCNKA-206ENST00000491433 DDNO94850 711 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-206ENST00000491433 CYP19A1P11511 503 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-206ENST00000491433 EAPPQ56P03 285 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-206ENST00000491433 VSIG10Q8N0Z9 540 aa15.22■□□□□ 0.03
CLCNKA-206ENST00000491433 SLC17A8Q8NDX2 589 aa15.22■□□□□ 0.03
CLCNKA-206ENST00000491433 TAF1DQ9H5J8 278 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-206ENST00000491433 CLEC11AQ9Y240 323 aa15.22■□□□□ 0.03
CLCNKA-206ENST00000491433 A0A087WZG4 1122 aa15.21■□□□□ 0.03
CLCNKA-206ENST00000491433 PDE6BP35913 854 aa15.21■□□□□ 0.03
CLCNKA-206ENST00000491433 SULT6B1Q6IMI4 303 aa15.21■□□□□ 0.03
CLCNKA-206ENST00000491433 CYP4F22Q6NT55 531 aa15.21■□□□□ 0.03
CLCNKA-206ENST00000491433 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
CLCNKA-206ENST00000491433 POLR3GLQ9BT43 218 aa15.2■□□□□ 0.02
CLCNKA-206ENST00000491433 TIMELESSQ9UNS1 1208 aa15.2■□□□□ 0.02
CLCNKA-206ENST00000491433 FER1L6Q2WGJ9 1857 aa15.2■□□□□ 0.02
CLCNKA-206ENST00000491433 CASP8AP2Q9UKL3 1982 aa15.2■□□□□ 0.02
CLCNKA-206ENST00000491433 LTBP3Q9NS15 1303 aa15.19■□□□□ 0.02
CLCNKA-206ENST00000491433 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
CLCNKA-206ENST00000491433 AEBP1Q8IUX7 1158 aa15.19■□□□□ 0.02
CLCNKA-206ENST00000491433 CNTROBQ8N137 903 aa15.19■□□□□ 0.02
CLCNKA-206ENST00000491433 STARD3NLO95772 234 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms