RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 PASKQ96RG2 1323 aa15.31■□□□□ 0.04
NCSTN-214ENST00000491390 NRXN2Q9P2S2 1712 aa15.31■□□□□ 0.04
NCSTN-214ENST00000491390 VIRMAQ69YN4 1812 aaKnown RBP15.31■□□□□ 0.04
NCSTN-214ENST00000491390 IFNL2Q8IZJ0 200 aa15.3■□□□□ 0.04
NCSTN-214ENST00000491390 PCGF6Q9BYE7 350 aa15.3■□□□□ 0.04
NCSTN-214ENST00000491390 LBX1P52954 281 aa15.29■□□□□ 0.04
NCSTN-214ENST00000491390 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
NCSTN-214ENST00000491390 POTEJP0CG39 1038 aa15.28■□□□□ 0.04
NCSTN-214ENST00000491390 VEGFBP49765 207 aa15.28■□□□□ 0.04
NCSTN-214ENST00000491390 MLLT1Q03111 559 aaPredicted RBP15.28■□□□□ 0.04
NCSTN-214ENST00000491390 AIDAQ96BJ3 306 aa15.28■□□□□ 0.04
NCSTN-214ENST00000491390 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
NCSTN-214ENST00000491390 TJP1Q07157 1748 aa15.27■□□□□ 0.04
NCSTN-214ENST00000491390 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.04
NCSTN-214ENST00000491390 HSPA8P11142 646 aaKnown RBP15.27■□□□□ 0.04
NCSTN-214ENST00000491390 CRKLP46109 303 aaKnown RBP15.26■□□□□ 0.03
NCSTN-214ENST00000491390 CCDC88AQ3V6T2 1871 aa15.25■□□□□ 0.03
NCSTN-214ENST00000491390 AFDNP55196 1824 aaKnown RBP15.25■□□□□ 0.03
NCSTN-214ENST00000491390 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
NCSTN-214ENST00000491390 AEBP1Q8IUX7 1158 aa15.25■□□□□ 0.03
NCSTN-214ENST00000491390 PANK3Q9H999 370 aa15.25■□□□□ 0.03
NCSTN-214ENST00000491390 DICER1Q9UPY3 1922 aaKnown RBP15.25■□□□□ 0.03
NCSTN-214ENST00000491390 THSD7BQ9C0I4 1608 aa15.25■□□□□ 0.03
NCSTN-214ENST00000491390 DPY19L2Q6NUT2 758 aa15.24■□□□□ 0.03
NCSTN-214ENST00000491390 TTLL6Q8N841 843 aa15.24■□□□□ 0.03
NCSTN-214ENST00000491390 ZNF530Q6P9A1 599 aaPredicted RBP15.23■□□□□ 0.03
NCSTN-214ENST00000491390 FER1L6Q2WGJ9 1857 aa15.23■□□□□ 0.03
NCSTN-214ENST00000491390 ADAMTSL1Q8N6G6 1762 aa15.22■□□□□ 0.03
NCSTN-214ENST00000491390 ITGBL1O95965 494 aaPredicted RBP15.22■□□□□ 0.03
NCSTN-214ENST00000491390 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
NCSTN-214ENST00000491390 PDE4DIPQ5VU43 2346 aa15.22■□□□□ 0.03
NCSTN-214ENST00000491390 LTBP3Q9NS15 1303 aa15.21■□□□□ 0.03
NCSTN-214ENST00000491390 RASSF10A6NK89 507 aa15.21■□□□□ 0.03
NCSTN-214ENST00000491390 TMEM88BA6NKF7 163 aa15.21■□□□□ 0.03
NCSTN-214ENST00000491390 PTCD1O75127 700 aaKnown RBP15.21■□□□□ 0.03
NCSTN-214ENST00000491390 CABP4P57796 275 aa15.21■□□□□ 0.03
NCSTN-214ENST00000491390 PLEKHO1Q53GL0 409 aaPredicted RBP15.21■□□□□ 0.03
NCSTN-214ENST00000491390 CARMIL3Q8ND23 1372 aa15.21■□□□□ 0.02
NCSTN-214ENST00000491390 NFIXQ14938 502 aa15.2■□□□□ 0.02
NCSTN-214ENST00000491390 LDHDQ86WU2 507 aa15.2■□□□□ 0.02
NCSTN-214ENST00000491390 EIF4G2P78344 907 aaKnown RBP eCLIP15.19■□□□□ 0.02
NCSTN-214ENST00000491390 ERFEQ4G0M1 354 aa15.19■□□□□ 0.02
NCSTN-214ENST00000491390 USPL1Q5W0Q7 1092 aa15.19■□□□□ 0.02
NCSTN-214ENST00000491390 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
NCSTN-214ENST00000491390 L3MBTL3Q96JM7 780 aaPredicted RBP15.19■□□□□ 0.02
NCSTN-214ENST00000491390 SOS1Q07889 1333 aaPredicted RBP15.18■□□□□ 0.02
NCSTN-214ENST00000491390 SCN4AP35499 1836 aa15.18■□□□□ 0.02
NCSTN-214ENST00000491390 DDNO94850 711 aaPredicted RBP15.18■□□□□ 0.02
NCSTN-214ENST00000491390 HSP90AB1P08238 724 aaKnown RBP15.18■□□□□ 0.02
NCSTN-214ENST00000491390 MTHFSP49914 203 aa15.18■□□□□ 0.02
NCSTN-214ENST00000491390 SULT6B1Q6IMI4 303 aa15.18■□□□□ 0.02
NCSTN-214ENST00000491390 TIMELESSQ9UNS1 1208 aa15.18■□□□□ 0.02
NCSTN-214ENST00000491390 MAP2K1Q02750 393 aaPredicted RBP15.17■□□□□ 0.02
NCSTN-214ENST00000491390 C1orf141Q5JVX7 400 aa15.17■□□□□ 0.02
NCSTN-214ENST00000491390 C2CD5Q86YS7 1000 aa15.17■□□□□ 0.02
NCSTN-214ENST00000491390 NFATC2IPQ8NCF5 419 aa15.17■□□□□ 0.02
NCSTN-214ENST00000491390 TAF1DQ9H5J8 278 aaPredicted RBP15.17■□□□□ 0.02
NCSTN-214ENST00000491390 BCL2L12Q9HB09 334 aa15.17■□□□□ 0.02
NCSTN-214ENST00000491390 COL11A2P13942 1736 aaPredicted RBP15.17■□□□□ 0.02
NCSTN-214ENST00000491390 ANKRD31Q8N7Z5 1873 aa15.16■□□□□ 0.02
NCSTN-214ENST00000491390 IQCA1LA6NCM1 817 aa15.16■□□□□ 0.02
NCSTN-214ENST00000491390 CCDC85CA6NKD9 419 aa15.16■□□□□ 0.02
NCSTN-214ENST00000491390 NARFQ9UHQ1 456 aa15.16■□□□□ 0.02
NCSTN-214ENST00000491390 H0YIN7 160 aa15.15■□□□□ 0.02
NCSTN-214ENST00000491390 ZPR1O75312 459 aa15.15■□□□□ 0.02
NCSTN-214ENST00000491390 SERPINB2P05120 415 aa15.15■□□□□ 0.02
NCSTN-214ENST00000491390 AMOTQ4VCS5 1084 aa15.15■□□□□ 0.02
NCSTN-214ENST00000491390 WDR33Q9C0J8 1336 aaKnown RBP15.15■□□□□ 0.02
NCSTN-214ENST00000491390 IL13P35225 146 aa15.14■□□□□ 0.01
NCSTN-214ENST00000491390 DEFB115Q30KQ5 88 aa15.14■□□□□ 0.01
NCSTN-214ENST00000491390 LTBP1Q14766 1721 aa15.14■□□□□ 0.01
NCSTN-214ENST00000491390 COL15A1P39059 1388 aa15.13■□□□□ 0.01
NCSTN-214ENST00000491390 C21orf2O43822 256 aa15.13■□□□□ 0.01
NCSTN-214ENST00000491390 TAOK3Q9H2K8 898 aa15.13■□□□□ 0.01
NCSTN-214ENST00000491390 LGR6Q9HBX8 967 aa15.13■□□□□ 0.01
NCSTN-214ENST00000491390 HMOX1P09601 288 aa15.12■□□□□ 0.01
NCSTN-214ENST00000491390 SLC39A6Q13433 755 aa15.12■□□□□ 0.01
NCSTN-214ENST00000491390 DNAJC10Q8IXB1 793 aa15.12■□□□□ 0.01
NCSTN-214ENST00000491390 CLSPNQ9HAW4 1339 aa15.12■□□□□ 0.01
NCSTN-214ENST00000491390 SCN11AQ9UI33 1791 aa15.11■□□□□ 0.01
NCSTN-214ENST00000491390 CYP19A1P11511 503 aaPredicted RBP15.11■□□□□ 0.01
NCSTN-214ENST00000491390 CNGB1Q14028 1251 aaPredicted RBP15.11■□□□□ 0.01
NCSTN-214ENST00000491390 PDZRN3Q9UPQ7 1066 aa15.11■□□□□ 0.01
NCSTN-214ENST00000491390 KNSTRNQ9Y448 316 aa15.11■□□□□ 0.01
NCSTN-214ENST00000491390 ARFGEF2Q9Y6D5 1785 aa15.1■□□□□ 0.01
NCSTN-214ENST00000491390 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
NCSTN-214ENST00000491390 CCER1Q8TC90 406 aaPredicted RBP15.09■□□□□ 0.01
NCSTN-214ENST00000491390 BRIP1Q9BX63 1249 aa15.09■□□□□ 0.01
NCSTN-214ENST00000491390 MRC1P22897 1456 aa15.08■□□□□ 0.01
NCSTN-214ENST00000491390 AKAP4Q5JQC9 854 aa15.08■□□□□ 0
NCSTN-214ENST00000491390 SLC52A2Q9HAB3 445 aa15.08■□□□□ 0
NCSTN-214ENST00000491390 ZBTB1Q9Y2K1 713 aa15.08■□□□□ 0
NCSTN-214ENST00000491390 SLX4Q8IY92 1834 aa15.08■□□□□ 0
NCSTN-214ENST00000491390 SCN7AQ01118 1682 aa15.07■□□□□ 0
NCSTN-214ENST00000491390 RNMTO43148 476 aaKnown RBP15.07■□□□□ 0
NCSTN-214ENST00000491390 PDE6BP35913 854 aa15.07■□□□□ 0
NCSTN-214ENST00000491390 CNTROBQ8N137 903 aa15.07■□□□□ 0
NCSTN-214ENST00000491390 MCOLN1Q9GZU1 580 aa15.07■□□□□ 0
NCSTN-214ENST00000491390 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
NCSTN-214ENST00000491390 ZNF541Q9H0D2 1346 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms