RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 GPBP1L1Q9HC44 474 aaPredicted RBP21.12■□□□□ 0.97
SMPD4-220ENST00000491319 ZPR1O75312 459 aa21.11■□□□□ 0.97
SMPD4-220ENST00000491319 TTC5Q8N0Z6 440 aa21.11■□□□□ 0.97
SMPD4-220ENST00000491319 IL17REQ8NFR9 667 aa21.11■□□□□ 0.97
SMPD4-220ENST00000491319 CFAP53Q96M91 514 aa21.11■□□□□ 0.97
SMPD4-220ENST00000491319 DLG5Q8TDM6 1919 aa21.1■□□□□ 0.97
SMPD4-220ENST00000491319 SBF1O95248 1867 aa21.1■□□□□ 0.97
SMPD4-220ENST00000491319 POLRMTO00411 1230 aaKnown RBP21.1■□□□□ 0.97
SMPD4-220ENST00000491319 KCNA3P22001 575 aa21.1■□□□□ 0.97
SMPD4-220ENST00000491319 PRKAR2BP31323 418 aa21.1■□□□□ 0.97
SMPD4-220ENST00000491319 TEFQ10587 303 aa21.1■□□□□ 0.97
SMPD4-220ENST00000491319 RSPH6AQ9H0K4 717 aa21.1■□□□□ 0.97
SMPD4-220ENST00000491319 FCHSD2O94868 740 aa21.09■□□□□ 0.97
SMPD4-220ENST00000491319 TM4SF1P30408 202 aa21.09■□□□□ 0.97
SMPD4-220ENST00000491319 PHACTR3Q96KR7 559 aa21.09■□□□□ 0.97
SMPD4-220ENST00000491319 CEMIPQ8WUJ3 1361 aa21.09■□□□□ 0.97
SMPD4-220ENST00000491319 PPP2R1AP30153 589 aa21.08■□□□□ 0.97
SMPD4-220ENST00000491319 ZNF496Q96IT1 587 aaPredicted RBP21.08■□□□□ 0.97
SMPD4-220ENST00000491319 NARFQ9UHQ1 456 aa21.08■□□□□ 0.97
SMPD4-220ENST00000491319 HEG1Q9ULI3 1381 aa21.08■□□□□ 0.96
SMPD4-220ENST00000491319 BCORQ6W2J9 1755 aa21.08■□□□□ 0.96
SMPD4-220ENST00000491319 ANKRD31Q8N7Z5 1873 aa21.07■□□□□ 0.96
SMPD4-220ENST00000491319 CANXP27824 592 aaKnown RBP21.07■□□□□ 0.96
SMPD4-220ENST00000491319 ZNF790Q6PG37 636 aa21.07■□□□□ 0.96
SMPD4-220ENST00000491319 NFIXQ14938 502 aa21.06■□□□□ 0.96
SMPD4-220ENST00000491319 BCL2L12Q9HB09 334 aa21.06■□□□□ 0.96
SMPD4-220ENST00000491319 CHRNA5P30532 468 aa21.05■□□□□ 0.96
SMPD4-220ENST00000491319 ARHGAP27Q6ZUM4 889 aa21.05■□□□□ 0.96
SMPD4-220ENST00000491319 PIM2Q9P1W9 311 aa21.05■□□□□ 0.96
SMPD4-220ENST00000491319 CCDC88AQ3V6T2 1871 aa21.05■□□□□ 0.96
SMPD4-220ENST00000491319 STARD3NLO95772 234 aa21.04■□□□□ 0.96
SMPD4-220ENST00000491319 U2AF1L5P0DN76 240 aaPredicted RBP21.04■□□□□ 0.96
SMPD4-220ENST00000491319 U2AF1Q01081 240 aaKnown RBP eCLIP21.04■□□□□ 0.96
SMPD4-220ENST00000491319 NUDCQ9Y266 331 aa21.04■□□□□ 0.96
SMPD4-220ENST00000491319 EIF5P55010 431 aaKnown RBP21.03■□□□□ 0.96
SMPD4-220ENST00000491319 COL11A2P13942 1736 aaPredicted RBP21.03■□□□□ 0.96
SMPD4-220ENST00000491319 CACNA1SQ13698 1873 aa21.03■□□□□ 0.96
SMPD4-220ENST00000491319 KCNQ3O43525 872 aa21.02■□□□□ 0.96
SMPD4-220ENST00000491319 DALRD3Q5D0E6 543 aaKnown RBP21.02■□□□□ 0.96
SMPD4-220ENST00000491319 CARMIL3Q8ND23 1372 aa21.01■□□□□ 0.95
SMPD4-220ENST00000491319 FMNL2Q96PY5 1086 aa21.01■□□□□ 0.95
SMPD4-220ENST00000491319 LAMB4A4D0S4 1761 aa21■□□□□ 0.95
SMPD4-220ENST00000491319 BTBD11A6QL63 1104 aa21■□□□□ 0.95
SMPD4-220ENST00000491319 SERPINB2P05120 415 aa21■□□□□ 0.95
SMPD4-220ENST00000491319 ZNF330Q9Y3S2 320 aaPredicted RBP21■□□□□ 0.95
SMPD4-220ENST00000491319 KIF3CO14782 793 aa20.99■□□□□ 0.95
SMPD4-220ENST00000491319 BICDL1Q6ZP65 573 aa20.99■□□□□ 0.95
SMPD4-220ENST00000491319 TEX13AQ9BXU3 409 aaPredicted RBP20.99■□□□□ 0.95
SMPD4-220ENST00000491319 KDM3BQ7LBC6 1761 aa20.99■□□□□ 0.95
SMPD4-220ENST00000491319 A0A087WZG4 1122 aa20.98■□□□□ 0.95
SMPD4-220ENST00000491319 MCM10Q7L590 875 aa20.98■□□□□ 0.95
SMPD4-220ENST00000491319 TIAM2Q8IVF5 1701 aa20.98■□□□□ 0.95
SMPD4-220ENST00000491319 A1BGP04217 495 aa20.97■□□□□ 0.95
SMPD4-220ENST00000491319 C9orf131Q5VYM1 1079 aa20.97■□□□□ 0.95
SMPD4-220ENST00000491319 TBC1D2BQ9UPU7 963 aa20.97■□□□□ 0.95
SMPD4-220ENST00000491319 CEP350Q5VT06 3117 aa20.96■□□□□ 0.95
SMPD4-220ENST00000491319 IL6STP40189 918 aaPredicted RBP20.96■□□□□ 0.95
SMPD4-220ENST00000491319 DCTN1Q14203 1278 aa20.96■□□□□ 0.95
SMPD4-220ENST00000491319 TBC1D9BQ66K14 1250 aa20.96■□□□□ 0.95
SMPD4-220ENST00000491319 RTF1Q92541 710 aaKnown RBP20.96■□□□□ 0.95
SMPD4-220ENST00000491319 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
SMPD4-220ENST00000491319 PRAMEF22A3QJZ6 481 aa20.95■□□□□ 0.94
SMPD4-220ENST00000491319 ARFGEF2Q9Y6D5 1785 aa20.95■□□□□ 0.94
SMPD4-220ENST00000491319 PIP4K2AP48426 406 aaPredicted RBP20.94■□□□□ 0.94
SMPD4-220ENST00000491319 FER1L6Q2WGJ9 1857 aa20.93■□□□□ 0.94
SMPD4-220ENST00000491319 NMRK2Q9NPI5 230 aa20.93■□□□□ 0.94
SMPD4-220ENST00000491319 RNF181Q9P0P0 153 aa20.93■□□□□ 0.94
SMPD4-220ENST00000491319 USP16Q9Y5T5 823 aa20.93■□□□□ 0.94
SMPD4-220ENST00000491319 DICER1Q9UPY3 1922 aaKnown RBP20.92■□□□□ 0.94
SMPD4-220ENST00000491319 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
SMPD4-220ENST00000491319 HSPA6P17066 643 aa20.92■□□□□ 0.94
SMPD4-220ENST00000491319 C2CD5Q86YS7 1000 aa20.92■□□□□ 0.94
SMPD4-220ENST00000491319 RASSF7Q02833 373 aa20.91■□□□□ 0.94
SMPD4-220ENST00000491319 NPM2Q86SE8 214 aaKnown RBP20.91■□□□□ 0.94
SMPD4-220ENST00000491319 HTATSF1O43719 755 aaKnown RBP20.9■□□□□ 0.94
SMPD4-220ENST00000491319 PRR5LQ6MZQ0 368 aa20.9■□□□□ 0.94
SMPD4-220ENST00000491319 DZIP3Q86Y13 1208 aaKnown RBP20.9■□□□□ 0.94
SMPD4-220ENST00000491319 CCDC24Q8N4L8 307 aa20.9■□□□□ 0.94
SMPD4-220ENST00000491319 SLX4Q8IY92 1834 aa20.9■□□□□ 0.94
SMPD4-220ENST00000491319 H0YIN7 160 aa20.89■□□□□ 0.93
SMPD4-220ENST00000491319 SNRPA1P09661 255 aaKnown RBP20.89■□□□□ 0.93
SMPD4-220ENST00000491319 TTLL6Q8N841 843 aa20.89■□□□□ 0.93
SMPD4-220ENST00000491319 NUP98P52948 1817 aa20.88■□□□□ 0.93
SMPD4-220ENST00000491319 WDR90Q96KV7 1748 aa20.87■□□□□ 0.93
SMPD4-220ENST00000491319 TOMM70O94826 608 aa20.86■□□□□ 0.93
SMPD4-220ENST00000491319 PRELPP51888 382 aa20.86■□□□□ 0.93
SMPD4-220ENST00000491319 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
SMPD4-220ENST00000491319 CNBD1Q8NA66 436 aa20.86■□□□□ 0.93
SMPD4-220ENST00000491319 PLEKHF1Q96S99 279 aa20.86■□□□□ 0.93
SMPD4-220ENST00000491319 SETDB2Q96T68 719 aa20.86■□□□□ 0.93
SMPD4-220ENST00000491319 BRIP1Q9BX63 1249 aa20.86■□□□□ 0.93
SMPD4-220ENST00000491319 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
SMPD4-220ENST00000491319 NBPF26B4DH59 902 aa20.85■□□□□ 0.93
SMPD4-220ENST00000491319 NEFMP07197 916 aa20.85■□□□□ 0.93
SMPD4-220ENST00000491319 PDE6BP35913 854 aa20.85■□□□□ 0.93
SMPD4-220ENST00000491319 NBPF10Q6P3W6 841 aaKnown RBP20.85■□□□□ 0.93
SMPD4-220ENST00000491319 NBPF15Q8N660 670 aa20.85■□□□□ 0.93
SMPD4-220ENST00000491319 ZNF622Q969S3 477 aaKnown RBP eCLIP20.85■□□□□ 0.93
SMPD4-220ENST00000491319 KDM2BQ8NHM5 1336 aa20.84■□□□□ 0.93
SMPD4-220ENST00000491319 NPHP1O15259 732 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms