RNA–Protein interactions for RNA: ENST00000491221.1

ATP13A1-210, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 937 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-210ENST00000491221 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
ATP13A1-210ENST00000491221 NARFQ9UHQ1 456 aa18.47■□□□□ 0.55
ATP13A1-210ENST00000491221 ZBTB1Q9Y2K1 713 aa18.47■□□□□ 0.55
ATP13A1-210ENST00000491221 U2SURPO15042 1029 aaKnown RBP18.46■□□□□ 0.55
ATP13A1-210ENST00000491221 VIRMAQ69YN4 1812 aaKnown RBP18.46■□□□□ 0.55
ATP13A1-210ENST00000491221 KCPQ6ZWJ8 1503 aa18.45■□□□□ 0.54
ATP13A1-210ENST00000491221 NFIXQ14938 502 aa18.45■□□□□ 0.54
ATP13A1-210ENST00000491221 C16orf71Q8IYS4 520 aaPredicted RBP18.45■□□□□ 0.54
ATP13A1-210ENST00000491221 NMRK2Q9NPI5 230 aa18.45■□□□□ 0.54
ATP13A1-210ENST00000491221 ADAMTS7Q9UKP4 1686 aa18.44■□□□□ 0.54
ATP13A1-210ENST00000491221 STARD3NLO95772 234 aa18.44■□□□□ 0.54
ATP13A1-210ENST00000491221 CANXP27824 592 aaKnown RBP18.44■□□□□ 0.54
ATP13A1-210ENST00000491221 APLP1P51693 650 aa18.44■□□□□ 0.54
ATP13A1-210ENST00000491221 TEFQ10587 303 aa18.44■□□□□ 0.54
ATP13A1-210ENST00000491221 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
ATP13A1-210ENST00000491221 RNF181Q9P0P0 153 aa18.44■□□□□ 0.54
ATP13A1-210ENST00000491221 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
ATP13A1-210ENST00000491221 A0A087WZG4 1122 aa18.42■□□□□ 0.54
ATP13A1-210ENST00000491221 SERPINB2P05120 415 aa18.42■□□□□ 0.54
ATP13A1-210ENST00000491221 NPC1L1Q9UHC9 1359 aa18.42■□□□□ 0.54
ATP13A1-210ENST00000491221 GNAT3A8MTJ3 354 aa18.41■□□□□ 0.54
ATP13A1-210ENST00000491221 IFFO2Q5TF58 517 aa18.4■□□□□ 0.54
ATP13A1-210ENST00000491221 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
ATP13A1-210ENST00000491221 RBM46Q8TBY0 533 aaKnown RBP18.4■□□□□ 0.54
ATP13A1-210ENST00000491221 ZNF330Q9Y3S2 320 aaPredicted RBP18.4■□□□□ 0.54
ATP13A1-210ENST00000491221 COL3A1P02461 1466 aaPredicted RBP18.39■□□□□ 0.54
ATP13A1-210ENST00000491221 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
ATP13A1-210ENST00000491221 NPM2Q86SE8 214 aaKnown RBP18.39■□□□□ 0.53
ATP13A1-210ENST00000491221 ZNF496Q96IT1 587 aaPredicted RBP18.39■□□□□ 0.53
ATP13A1-210ENST00000491221 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
ATP13A1-210ENST00000491221 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
ATP13A1-210ENST00000491221 BCL2L12Q9HB09 334 aa18.39■□□□□ 0.53
ATP13A1-210ENST00000491221 UBR2Q8IWV8 1755 aa18.39■□□□□ 0.53
ATP13A1-210ENST00000491221 AFDNP55196 1824 aaKnown RBP18.39■□□□□ 0.53
ATP13A1-210ENST00000491221 H0YIN7 160 aa18.38■□□□□ 0.53
ATP13A1-210ENST00000491221 EIF5P55010 431 aaKnown RBP18.38■□□□□ 0.53
ATP13A1-210ENST00000491221 C2CD5Q86YS7 1000 aa18.38■□□□□ 0.53
ATP13A1-210ENST00000491221 TTLL6Q8N841 843 aa18.38■□□□□ 0.53
ATP13A1-210ENST00000491221 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
ATP13A1-210ENST00000491221 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
ATP13A1-210ENST00000491221 RASSF7Q02833 373 aa18.37■□□□□ 0.53
ATP13A1-210ENST00000491221 FMNL2Q96PY5 1086 aa18.36■□□□□ 0.53
ATP13A1-210ENST00000491221 RRAGCQ9HB90 399 aa18.36■□□□□ 0.53
ATP13A1-210ENST00000491221 NRXN2Q9P2S2 1712 aa18.36■□□□□ 0.53
ATP13A1-210ENST00000491221 ZC3H4Q9UPT8 1303 aaKnown RBP18.35■□□□□ 0.53
ATP13A1-210ENST00000491221 LMNB1P20700 586 aa18.35■□□□□ 0.53
ATP13A1-210ENST00000491221 FSTL1Q12841 308 aa18.35■□□□□ 0.53
ATP13A1-210ENST00000491221 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
ATP13A1-210ENST00000491221 SBF1O95248 1867 aa18.35■□□□□ 0.53
ATP13A1-210ENST00000491221 NPHP1O15259 732 aa18.34■□□□□ 0.53
ATP13A1-210ENST00000491221 PRKAR2BP31323 418 aa18.34■□□□□ 0.53
ATP13A1-210ENST00000491221 IL6STP40189 918 aaPredicted RBP18.34■□□□□ 0.53
ATP13A1-210ENST00000491221 TBC1D9BQ66K14 1250 aa18.34■□□□□ 0.53
ATP13A1-210ENST00000491221 TBC1D2BQ9UPU7 963 aa18.34■□□□□ 0.53
ATP13A1-210ENST00000491221 CARMIL3Q8ND23 1372 aa18.33■□□□□ 0.53
ATP13A1-210ENST00000491221 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
ATP13A1-210ENST00000491221 ZNF622Q969S3 477 aaKnown RBP eCLIP18.33■□□□□ 0.52
ATP13A1-210ENST00000491221 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
ATP13A1-210ENST00000491221 PDE6BP35913 854 aa18.32■□□□□ 0.52
ATP13A1-210ENST00000491221 DLEC1Q9Y238 1755 aa18.32■□□□□ 0.52
ATP13A1-210ENST00000491221 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
ATP13A1-210ENST00000491221 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
ATP13A1-210ENST00000491221 A1BGP04217 495 aa18.31■□□□□ 0.52
ATP13A1-210ENST00000491221 RTF1Q92541 710 aaKnown RBP18.31■□□□□ 0.52
ATP13A1-210ENST00000491221 PHACTR3Q96KR7 559 aa18.31■□□□□ 0.52
ATP13A1-210ENST00000491221 SETDB2Q96T68 719 aa18.31■□□□□ 0.52
ATP13A1-210ENST00000491221 BRIP1Q9BX63 1249 aa18.31■□□□□ 0.52
ATP13A1-210ENST00000491221 RSPH6AQ9H0K4 717 aa18.31■□□□□ 0.52
ATP13A1-210ENST00000491221 SIPA1L3O60292 1781 aaPredicted RBP18.3■□□□□ 0.52
ATP13A1-210ENST00000491221 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
ATP13A1-210ENST00000491221 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
ATP13A1-210ENST00000491221 DNAJC5GQ8N7S2 189 aa18.3■□□□□ 0.52
ATP13A1-210ENST00000491221 SMC1BQ8NDV3 1235 aa18.3■□□□□ 0.52
ATP13A1-210ENST00000491221 SCN7AQ01118 1682 aa18.3■□□□□ 0.52
ATP13A1-210ENST00000491221 GLTPD2A6NH11 291 aa18.29■□□□□ 0.52
ATP13A1-210ENST00000491221 ST5P78524 1137 aa18.29■□□□□ 0.52
ATP13A1-210ENST00000491221 PRR5LQ6MZQ0 368 aa18.29■□□□□ 0.52
ATP13A1-210ENST00000491221 CCDC24Q8N4L8 307 aa18.29■□□□□ 0.52
ATP13A1-210ENST00000491221 CNBD1Q8NA66 436 aa18.29■□□□□ 0.52
ATP13A1-210ENST00000491221 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
ATP13A1-210ENST00000491221 WDR90Q96KV7 1748 aa18.29■□□□□ 0.52
ATP13A1-210ENST00000491221 KCNQ3O43525 872 aa18.28■□□□□ 0.52
ATP13A1-210ENST00000491221 CAMTA2O94983 1202 aa18.28■□□□□ 0.52
ATP13A1-210ENST00000491221 VEGFAP15692 232 aaPredicted RBP18.28■□□□□ 0.52
ATP13A1-210ENST00000491221 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
ATP13A1-210ENST00000491221 NFKBIEO00221 500 aa18.27■□□□□ 0.52
ATP13A1-210ENST00000491221 HTRA3P83110 453 aa18.27■□□□□ 0.52
ATP13A1-210ENST00000491221 C21orf2O43822 256 aa18.26■□□□□ 0.51
ATP13A1-210ENST00000491221 PRELPP51888 382 aa18.26■□□□□ 0.51
ATP13A1-210ENST00000491221 DPY19L2Q6NUT2 758 aa18.26■□□□□ 0.51
ATP13A1-210ENST00000491221 MCM10Q7L590 875 aa18.26■□□□□ 0.51
ATP13A1-210ENST00000491221 KLRG1Q96E93 195 aa18.26■□□□□ 0.51
ATP13A1-210ENST00000491221 ANKRD31Q8N7Z5 1873 aa18.25■□□□□ 0.51
ATP13A1-210ENST00000491221 SNRPA1P09661 255 aaKnown RBP18.25■□□□□ 0.51
ATP13A1-210ENST00000491221 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
ATP13A1-210ENST00000491221 CNKSR1Q969H4 720 aa18.25■□□□□ 0.51
ATP13A1-210ENST00000491221 ZNF652Q9Y2D9 606 aa18.25■□□□□ 0.51
ATP13A1-210ENST00000491221 USP16Q9Y5T5 823 aa18.25■□□□□ 0.51
ATP13A1-210ENST00000491221 CCDC88AQ3V6T2 1871 aa18.24■□□□□ 0.51
ATP13A1-210ENST00000491221 TIAM2Q8IVF5 1701 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms