RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 PANK3Q9H999 370 aa21.02■□□□□ 0.96
SCAMP3-208ENST00000490999 SCN11AQ9UI33 1791 aa21.02■□□□□ 0.96
SCAMP3-208ENST00000490999 HSPA1AP0DMV8 641 aaKnown RBP21.01■□□□□ 0.95
SCAMP3-208ENST00000490999 HSPA1BP0DMV9 641 aaKnown RBP21.01■□□□□ 0.95
SCAMP3-208ENST00000490999 LMNB1P20700 586 aa21.01■□□□□ 0.95
SCAMP3-208ENST00000490999 SLC39A6Q13433 755 aa21.01■□□□□ 0.95
SCAMP3-208ENST00000490999 ZBTB1Q9Y2K1 713 aa21.01■□□□□ 0.95
SCAMP3-208ENST00000490999 AFDNP55196 1824 aaKnown RBP21.01■□□□□ 0.95
SCAMP3-208ENST00000490999 ZC3H4Q9UPT8 1303 aaKnown RBP21.01■□□□□ 0.95
SCAMP3-208ENST00000490999 MRC1P22897 1456 aa21.01■□□□□ 0.95
SCAMP3-208ENST00000490999 DLEC1Q9Y238 1755 aa21■□□□□ 0.95
SCAMP3-208ENST00000490999 NRXN2Q9P2S2 1712 aa21■□□□□ 0.95
SCAMP3-208ENST00000490999 GLTPD2A6NH11 291 aa20.99■□□□□ 0.95
SCAMP3-208ENST00000490999 NFKBIEO00221 500 aa20.99■□□□□ 0.95
SCAMP3-208ENST00000490999 CYP19A1P11511 503 aaPredicted RBP20.99■□□□□ 0.95
SCAMP3-208ENST00000490999 MORC1Q86VD1 984 aa20.99■□□□□ 0.95
SCAMP3-208ENST00000490999 SLC52A2Q9HAB3 445 aa20.99■□□□□ 0.95
SCAMP3-208ENST00000490999 BCL2L12Q9HB09 334 aa20.99■□□□□ 0.95
SCAMP3-208ENST00000490999 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
SCAMP3-208ENST00000490999 C2CD5Q86YS7 1000 aa20.98■□□□□ 0.95
SCAMP3-208ENST00000490999 NARFQ9UHQ1 456 aa20.98■□□□□ 0.95
SCAMP3-208ENST00000490999 SERPINB2P05120 415 aa20.97■□□□□ 0.95
SCAMP3-208ENST00000490999 VEGFAP15692 232 aaPredicted RBP20.97■□□□□ 0.95
SCAMP3-208ENST00000490999 TTLL6Q8N841 843 aa20.97■□□□□ 0.95
SCAMP3-208ENST00000490999 IL13P35225 146 aa20.96■□□□□ 0.95
SCAMP3-208ENST00000490999 AKAP4Q5JQC9 854 aa20.96■□□□□ 0.95
SCAMP3-208ENST00000490999 BICDL1Q6ZP65 573 aa20.96■□□□□ 0.95
SCAMP3-208ENST00000490999 ZNF219Q9P2Y4 722 aaPredicted RBP20.96■□□□□ 0.95
SCAMP3-208ENST00000490999 COL11A2P13942 1736 aaPredicted RBP20.93■□□□□ 0.94
SCAMP3-208ENST00000490999 POTECB2RU33 542 aa20.93■□□□□ 0.94
SCAMP3-208ENST00000490999 RNMTO43148 476 aaKnown RBP20.93■□□□□ 0.94
SCAMP3-208ENST00000490999 HMOX1P09601 288 aa20.93■□□□□ 0.94
SCAMP3-208ENST00000490999 CANXP27824 592 aaKnown RBP20.93■□□□□ 0.94
SCAMP3-208ENST00000490999 CCDC24Q8N4L8 307 aa20.93■□□□□ 0.94
SCAMP3-208ENST00000490999 HSPA5P11021 654 aaKnown RBP20.92■□□□□ 0.94
SCAMP3-208ENST00000490999 H0YIN7 160 aa20.91■□□□□ 0.94
SCAMP3-208ENST00000490999 SCN7AQ01118 1682 aa20.9■□□□□ 0.94
SCAMP3-208ENST00000490999 C21orf2O43822 256 aa20.89■□□□□ 0.93
SCAMP3-208ENST00000490999 POTEIP0CG38 1075 aa20.89■□□□□ 0.93
SCAMP3-208ENST00000490999 POTEJP0CG39 1038 aa20.89■□□□□ 0.93
SCAMP3-208ENST00000490999 ZNF622Q969S3 477 aaKnown RBP eCLIP20.89■□□□□ 0.93
SCAMP3-208ENST00000490999 MKRN1Q9UHC7 482 aaKnown RBP20.89■□□□□ 0.93
SCAMP3-208ENST00000490999 ZNF330Q9Y3S2 320 aaPredicted RBP20.89■□□□□ 0.93
SCAMP3-208ENST00000490999 ANKRD31Q8N7Z5 1873 aa20.89■□□□□ 0.93
SCAMP3-208ENST00000490999 UBR2Q8IWV8 1755 aa20.88■□□□□ 0.93
SCAMP3-208ENST00000490999 TBC1D9BQ66K14 1250 aa20.88■□□□□ 0.93
SCAMP3-208ENST00000490999 MTHFSDQ2M296 383 aaKnown RBP20.87■□□□□ 0.93
SCAMP3-208ENST00000490999 ERFEQ4G0M1 354 aa20.87■□□□□ 0.93
SCAMP3-208ENST00000490999 CCDC88AQ3V6T2 1871 aa20.86■□□□□ 0.93
SCAMP3-208ENST00000490999 VIRMAQ69YN4 1812 aaKnown RBP20.86■□□□□ 0.93
SCAMP3-208ENST00000490999 EIF4G2P78344 907 aaKnown RBP eCLIP20.86■□□□□ 0.932e-10■■■■□ 24.2
SCAMP3-208ENST00000490999 PRR5LQ6MZQ0 368 aa20.85■□□□□ 0.93
SCAMP3-208ENST00000490999 DPY19L2Q6NUT2 758 aa20.85■□□□□ 0.93
SCAMP3-208ENST00000490999 KNSTRNQ9Y448 316 aa20.85■□□□□ 0.93
SCAMP3-208ENST00000490999 EIF5P55010 431 aaKnown RBP20.84■□□□□ 0.93
SCAMP3-208ENST00000490999 TTC5Q8N0Z6 440 aa20.84■□□□□ 0.93
SCAMP3-208ENST00000490999 VSIG10Q8N0Z9 540 aa20.84■□□□□ 0.93
SCAMP3-208ENST00000490999 CHADLQ6NUI6 762 aa20.83■□□□□ 0.93
SCAMP3-208ENST00000490999 TAOK3Q9H2K8 898 aa20.83■□□□□ 0.93
SCAMP3-208ENST00000490999 TIMELESSQ9UNS1 1208 aa20.83■□□□□ 0.93
SCAMP3-208ENST00000490999 TBC1D2BQ9UPU7 963 aa20.83■□□□□ 0.93
SCAMP3-208ENST00000490999 DDNO94850 711 aaPredicted RBP20.82■□□□□ 0.92
SCAMP3-208ENST00000490999 CREBZFQ9NS37 354 aa20.82■□□□□ 0.92
SCAMP3-208ENST00000490999 FER1L6Q2WGJ9 1857 aa20.81■□□□□ 0.92
SCAMP3-208ENST00000490999 STARD3NLO95772 234 aa20.81■□□□□ 0.92
SCAMP3-208ENST00000490999 PDE6BP35913 854 aa20.81■□□□□ 0.92
SCAMP3-208ENST00000490999 AMER1Q5JTC6 1135 aaPredicted RBP20.81■□□□□ 0.92
SCAMP3-208ENST00000490999 ZNF496Q96IT1 587 aaPredicted RBP20.81■□□□□ 0.92
SCAMP3-208ENST00000490999 BRIP1Q9BX63 1249 aa20.81■□□□□ 0.92
SCAMP3-208ENST00000490999 A0A087WZG4 1122 aa20.8■□□□□ 0.92
SCAMP3-208ENST00000490999 FOXN1O15353 648 aa20.8■□□□□ 0.92
SCAMP3-208ENST00000490999 NPHP1O15259 732 aa20.79■□□□□ 0.92
SCAMP3-208ENST00000490999 TRIM26Q12899 539 aaPredicted RBP20.79■□□□□ 0.92
SCAMP3-208ENST00000490999 PRPF40BQ6NWY9 871 aaKnown RBP20.79■□□□□ 0.92
SCAMP3-208ENST00000490999 CNBD1Q8NA66 436 aa20.79■□□□□ 0.92
SCAMP3-208ENST00000490999 HEG1Q9ULI3 1381 aa20.79■□□□□ 0.92
SCAMP3-208ENST00000490999 LTBP3Q9NS15 1303 aa20.78■□□□□ 0.92
SCAMP3-208ENST00000490999 CACNA1SQ13698 1873 aa20.78■□□□□ 0.92
SCAMP3-208ENST00000490999 CNTNAP1P78357 1384 aa20.78■□□□□ 0.92
SCAMP3-208ENST00000490999 DICER1Q9UPY3 1922 aaKnown RBP20.77■□□□□ 0.92
SCAMP3-208ENST00000490999 SLX4Q8IY92 1834 aa20.77■□□□□ 0.92
SCAMP3-208ENST00000490999 PIP4K2AP48426 406 aaPredicted RBP20.76■□□□□ 0.91
SCAMP3-208ENST00000490999 ZNF790Q6PG37 636 aa20.76■□□□□ 0.91
SCAMP3-208ENST00000490999 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
SCAMP3-208ENST00000490999 BCORQ6W2J9 1755 aa20.75■□□□□ 0.91
SCAMP3-208ENST00000490999 DIAPH1O60610 1272 aaKnown RBP20.75■□□□□ 0.91
SCAMP3-208ENST00000490999 CAMTA2O94983 1202 aa20.75■□□□□ 0.91
SCAMP3-208ENST00000490999 A1BGP04217 495 aa20.75■□□□□ 0.91
SCAMP3-208ENST00000490999 ST5P78524 1137 aa20.75■□□□□ 0.91
SCAMP3-208ENST00000490999 TEFQ10587 303 aa20.75■□□□□ 0.91
SCAMP3-208ENST00000490999 PASKQ96RG2 1323 aa20.75■□□□□ 0.91
SCAMP3-208ENST00000490999 ZNF541Q9H0D2 1346 aa20.75■□□□□ 0.91
SCAMP3-208ENST00000490999 COL3A1P02461 1466 aaPredicted RBP20.75■□□□□ 0.91
SCAMP3-208ENST00000490999 SRGNP10124 158 aa20.74■□□□□ 0.91
SCAMP3-208ENST00000490999 IL6STP40189 918 aaPredicted RBP20.74■□□□□ 0.91
SCAMP3-208ENST00000490999 IL17REQ8NFR9 667 aa20.74■□□□□ 0.91
SCAMP3-208ENST00000490999 CNKSR1Q969H4 720 aa20.74■□□□□ 0.91
SCAMP3-208ENST00000490999 SETDB2Q96T68 719 aa20.74■□□□□ 0.91
SCAMP3-208ENST00000490999 PDZRN3Q9UPQ7 1066 aa20.74■□□□□ 0.91
SCAMP3-208ENST00000490999 SIPA1L3O60292 1781 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms