RNA–Protein interactions for RNA: ENST00000490812.5

PTPN18-215, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 5

Gene PTPN18, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-215	ENST00000490812	FKBP8	Q14318	412 aa		28.34	■■■□□ 2.13
PTPN18-215	ENST00000490812	RALBP1	Q15311	655 aa		28.34	■■■□□ 2.13
PTPN18-215	ENST00000490812	PXDNL	A1KZ92	1463 aa		28.34	■■■□□ 2.13
PTPN18-215	ENST00000490812	BTBD11	A6QL63	1104 aa		28.33	■■■□□ 2.13
PTPN18-215	ENST00000490812	NEFM	P07197	916 aa		28.33	■■■□□ 2.13
PTPN18-215	ENST00000490812	FMNL2	Q96PY5	1086 aa		28.33	■■■□□ 2.13
PTPN18-215	ENST00000490812	NARF	Q9UHQ1	456 aa		28.32	■■■□□ 2.12
PTPN18-215	ENST00000490812	USPL1	Q5W0Q7	1092 aa		28.3	■■■□□ 2.12
PTPN18-215	ENST00000490812	MCM10	Q7L590	875 aa		28.3	■■■□□ 2.12
PTPN18-215	ENST00000490812	N4BP2	Q86UW6	1770 aa	Predicted RBP	28.29	■■■□□ 2.12
PTPN18-215	ENST00000490812	DDX10	Q13206	875 aa	Known RBP	28.29	■■■□□ 2.12
PTPN18-215	ENST00000490812	DLG5	Q8TDM6	1919 aa		28.28	■■■□□ 2.12
PTPN18-215	ENST00000490812	CANX	P27824	592 aa	Known RBP	28.28	■■■□□ 2.12
PTPN18-215	ENST00000490812	DDR1	Q08345	913 aa		28.28	■■■□□ 2.12
PTPN18-215	ENST00000490812	PNN	Q9H307	717 aa	Known RBP	28.28	■■■□□ 2.12
PTPN18-215	ENST00000490812		A0A087WZG4	1122 aa		28.27	■■■□□ 2.12
PTPN18-215	ENST00000490812	TM4SF1	P30408	202 aa		28.27	■■■□□ 2.12
PTPN18-215	ENST00000490812	EIF5	P55010	431 aa	Known RBP	28.27	■■■□□ 2.12
PTPN18-215	ENST00000490812	PLEKHF1	Q96S99	279 aa		28.27	■■■□□ 2.12
PTPN18-215	ENST00000490812	POLRMT	O00411	1230 aa	Known RBP	28.25	■■■□□ 2.11
PTPN18-215	ENST00000490812	KCNQ3	O43525	872 aa		28.25	■■■□□ 2.11
PTPN18-215	ENST00000490812	BRCA1	P38398	1863 aa	Known RBP	28.25	■■■□□ 2.11
PTPN18-215	ENST00000490812	DCTN1	Q14203	1278 aa		28.24	■■■□□ 2.11
PTPN18-215	ENST00000490812		A0A0G2JLW4	131 aa		28.23	■■■□□ 2.11
PTPN18-215	ENST00000490812	IL6ST	P40189	918 aa	Predicted RBP	28.23	■■■□□ 2.11
PTPN18-215	ENST00000490812	WWC3	Q9ULE0	1092 aa		28.23	■■■□□ 2.11
PTPN18-215	ENST00000490812	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.22	■■■□□ 2.11
PTPN18-215	ENST00000490812	BCL2L12	Q9HB09	334 aa		28.22	■■■□□ 2.11
PTPN18-215	ENST00000490812	NRXN2	Q9P2S2	1712 aa		28.22	■■■□□ 2.11
PTPN18-215	ENST00000490812	SCN7A	Q01118	1682 aa		28.22	■■■□□ 2.11
PTPN18-215	ENST00000490812	MAPK8IP3	Q9UPT6	1336 aa		28.21	■■■□□ 2.11
PTPN18-215	ENST00000490812	AFDN	P55196	1824 aa	Known RBP	28.21	■■■□□ 2.11
PTPN18-215	ENST00000490812	DPEP1	P16444	411 aa		28.21	■■■□□ 2.11
PTPN18-215	ENST00000490812	NFIX	Q14938	502 aa		28.21	■■■□□ 2.11
PTPN18-215	ENST00000490812	TAF7	Q15545	349 aa	Predicted RBP	28.21	■■■□□ 2.11
PTPN18-215	ENST00000490812	NFE2L2	Q16236	605 aa		28.21	■■■□□ 2.11
PTPN18-215	ENST00000490812	SNRPA1	P09661	255 aa	Known RBP	28.19	■■■□□ 2.1
PTPN18-215	ENST00000490812	A1BG	P04217	495 aa		28.18	■■■□□ 2.1
PTPN18-215	ENST00000490812	NPM2	Q86SE8	214 aa	Known RBP	28.18	■■■□□ 2.1
PTPN18-215	ENST00000490812	KDM3B	Q7LBC6	1761 aa		28.17	■■■□□ 2.1
PTPN18-215	ENST00000490812	PNISR	Q8TF01	805 aa	Known RBP	28.17	■■■□□ 2.1
PTPN18-215	ENST00000490812	BCS1L	Q9Y276	419 aa		28.17	■■■□□ 2.1
PTPN18-215	ENST00000490812	ARFGEF1	Q9Y6D6	1849 aa		28.17	■■■□□ 2.1
PTPN18-215	ENST00000490812	ADCY9	O60503	1353 aa		28.16	■■■□□ 2.1
PTPN18-215	ENST00000490812	KCNA3	P22001	575 aa		28.16	■■■□□ 2.1
PTPN18-215	ENST00000490812	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.16	■■■□□ 2.1
PTPN18-215	ENST00000490812	USP16	Q9Y5T5	823 aa		28.16	■■■□□ 2.1
PTPN18-215	ENST00000490812	PIM2	Q9P1W9	311 aa		28.15	■■■□□ 2.1
PTPN18-215	ENST00000490812	SERPINB2	P05120	415 aa		28.14	■■■□□ 2.1
PTPN18-215	ENST00000490812	LAMB4	A4D0S4	1761 aa		28.14	■■■□□ 2.09
PTPN18-215	ENST00000490812	BCOR	Q6W2J9	1755 aa		28.14	■■■□□ 2.09
PTPN18-215	ENST00000490812	TBC1D2B	Q9UPU7	963 aa		28.13	■■■□□ 2.09
PTPN18-215	ENST00000490812	ATP10D	Q9P241	1426 aa		28.12	■■■□□ 2.09
PTPN18-215	ENST00000490812	PRAMEF22	A3QJZ6	481 aa		28.12	■■■□□ 2.09
PTPN18-215	ENST00000490812	DLEC1	Q9Y238	1755 aa		28.1	■■■□□ 2.09
PTPN18-215	ENST00000490812	DALRD3	Q5D0E6	543 aa	Known RBP	28.1	■■■□□ 2.09
PTPN18-215	ENST00000490812	TBC1D9B	Q66K14	1250 aa		28.1	■■■□□ 2.09
PTPN18-215	ENST00000490812	MIS18A	Q9NYP9	233 aa		28.1	■■■□□ 2.09
PTPN18-215	ENST00000490812	CAMTA2	O94983	1202 aa		28.09	■■■□□ 2.09
PTPN18-215	ENST00000490812	CHRNA5	P30532	468 aa		28.09	■■■□□ 2.09
PTPN18-215	ENST00000490812	ZEB1	P37275	1124 aa	Predicted RBP	28.09	■■■□□ 2.09
PTPN18-215	ENST00000490812	BICDL1	Q6ZP65	573 aa		28.09	■■■□□ 2.09
PTPN18-215	ENST00000490812	DZIP3	Q86Y13	1208 aa	Known RBP	28.09	■■■□□ 2.09
PTPN18-215	ENST00000490812	CARMIL3	Q8ND23	1372 aa		28.09	■■■□□ 2.09
PTPN18-215	ENST00000490812	THUMPD2	Q9BTF0	503 aa	Known RBP	28.07	■■■□□ 2.08
PTPN18-215	ENST00000490812	GIGYF1	O75420	1035 aa	Predicted RBP	28.06	■■■□□ 2.08
PTPN18-215	ENST00000490812	PIP4K2A	P48426	406 aa	Predicted RBP	28.06	■■■□□ 2.08
PTPN18-215	ENST00000490812	ARHGAP27	Q6ZUM4	889 aa		28.06	■■■□□ 2.08
PTPN18-215	ENST00000490812	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.06	■■■□□ 2.08
PTPN18-215	ENST00000490812	NBPF26	B4DH59	902 aa		28.05	■■■□□ 2.08
PTPN18-215	ENST00000490812	RGL2	O15211	777 aa		28.05	■■■□□ 2.08
PTPN18-215	ENST00000490812	RIPK4	P57078	832 aa		28.05	■■■□□ 2.08
PTPN18-215	ENST00000490812	LMOD3	Q0VAK6	560 aa		28.05	■■■□□ 2.08
PTPN18-215	ENST00000490812	NBPF10	Q6P3W6	841 aa	Known RBP	28.05	■■■□□ 2.08
PTPN18-215	ENST00000490812	CLEC4G	Q6UXB4	293 aa		28.05	■■■□□ 2.08
PTPN18-215	ENST00000490812	NBPF15	Q8N660	670 aa		28.05	■■■□□ 2.08
PTPN18-215	ENST00000490812	TMPO	P42166	694 aa	Known RBP	28.04	■■■□□ 2.08
PTPN18-215	ENST00000490812	EIF4A1	P60842	406 aa	Known RBP	28.04	■■■□□ 2.08
PTPN18-215	ENST00000490812	WDR43	Q15061	677 aa	Known RBP eCLIP	28.04	■■■□□ 2.08
PTPN18-215	ENST00000490812	SETDB2	Q96T68	719 aa		28.04	■■■□□ 2.08
PTPN18-215	ENST00000490812	ZNF652	Q9Y2D9	606 aa		28.03	■■■□□ 2.08
PTPN18-215	ENST00000490812	ANKRD31	Q8N7Z5	1873 aa		28.03	■■■□□ 2.08
PTPN18-215	ENST00000490812	C1QTNF8	P60827	252 aa		28.02	■■■□□ 2.08
PTPN18-215	ENST00000490812	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.02	■■■□□ 2.08
PTPN18-215	ENST00000490812	BABAM1	Q9NWV8	329 aa		28.02	■■■□□ 2.08
PTPN18-215	ENST00000490812	PDZRN3	Q9UPQ7	1066 aa		28.02	■■■□□ 2.08
PTPN18-215	ENST00000490812	PRR5L	Q6MZQ0	368 aa		28.01	■■■□□ 2.07
PTPN18-215	ENST00000490812	BRIP1	Q9BX63	1249 aa		28.01	■■■□□ 2.07
PTPN18-215	ENST00000490812		H0YIN7	160 aa		28	■■■□□ 2.07
PTPN18-215	ENST00000490812	C2CD5	Q86YS7	1000 aa		28	■■■□□ 2.07
PTPN18-215	ENST00000490812	PDE6B	P35913	854 aa		27.99	■■■□□ 2.07
PTPN18-215	ENST00000490812	CNBD1	Q8NA66	436 aa		27.99	■■■□□ 2.07
PTPN18-215	ENST00000490812	RUNDC1	Q96C34	613 aa		27.99	■■■□□ 2.07
PTPN18-215	ENST00000490812	TSPYL4	Q9UJ04	414 aa		27.99	■■■□□ 2.07
PTPN18-215	ENST00000490812	CCDC146	Q8IYE0	955 aa		27.97	■■■□□ 2.07
PTPN18-215	ENST00000490812	TTLL6	Q8N841	843 aa		27.97	■■■□□ 2.07
PTPN18-215	ENST00000490812	ST5	P78524	1137 aa		27.96	■■■□□ 2.07
PTPN18-215	ENST00000490812	COL11A2	P13942	1736 aa	Predicted RBP	27.95	■■■□□ 2.07
PTPN18-215	ENST00000490812	ERBB4	Q15303	1308 aa		27.95	■■■□□ 2.07
PTPN18-215	ENST00000490812	NPHP1	O15259	732 aa		27.95	■■■□□ 2.06

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms