RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 SLC24A1O60721 1099 aa10.19□□□□□ -0.78
PRPF4B-208ENST00000490653 IL2RBP14784 551 aa10.19□□□□□ -0.78
PRPF4B-208ENST00000490653 AMPHP49418 695 aa10.19□□□□□ -0.78
PRPF4B-208ENST00000490653 PPP1R15BQ5SWA1 713 aa10.19□□□□□ -0.78
PRPF4B-208ENST00000490653 USHBP1Q8N6Y0 703 aa10.19□□□□□ -0.78
PRPF4B-208ENST00000490653 CDCA7Q9BWT1 371 aaPredicted RBP10.19□□□□□ -0.78
PRPF4B-208ENST00000490653 SLC4A5Q9BY07 1137 aa10.19□□□□□ -0.78
PRPF4B-208ENST00000490653 BCL2L12Q9HB09 334 aa10.19□□□□□ -0.78
PRPF4B-208ENST00000490653 NBPF6Q5VWK0 638 aa10.18□□□□□ -0.78
PRPF4B-208ENST00000490653 ZNF454Q8N9F8 522 aa10.18□□□□□ -0.78
PRPF4B-208ENST00000490653 NBPF4Q96M43 638 aa10.18□□□□□ -0.78
PRPF4B-208ENST00000490653 RGPD2P0DJD1 1756 aa10.18□□□□□ -0.78
PRPF4B-208ENST00000490653 TNS2Q63HR2 1409 aa10.17□□□□□ -0.78
PRPF4B-208ENST00000490653 HSP90AB2PQ58FF8 381 aa10.17□□□□□ -0.78
PRPF4B-208ENST00000490653 DDX54Q8TDD1 881 aaKnown RBP10.17□□□□□ -0.78
PRPF4B-208ENST00000490653 KAT6BQ8WYB5 2073 aa10.17□□□□□ -0.78
PRPF4B-208ENST00000490653 FOSBP53539 338 aa10.16□□□□□ -0.78
PRPF4B-208ENST00000490653 CDCA8Q53HL2 280 aa10.16□□□□□ -0.78
PRPF4B-208ENST00000490653 MTFR1LQ9H019 292 aa10.16□□□□□ -0.78
PRPF4B-208ENST00000490653 EMILIN1Q9Y6C2 1016 aa10.16□□□□□ -0.78
PRPF4B-208ENST00000490653 CEP350Q5VT06 3117 aa10.16□□□□□ -0.78
PRPF4B-208ENST00000490653 NSD3Q9BZ95 1437 aa10.16□□□□□ -0.78
PRPF4B-208ENST00000490653 MAP3K5Q99683 1374 aa10.15□□□□□ -0.78
PRPF4B-208ENST00000490653 KCNQ4P56696 695 aa10.15□□□□□ -0.78
PRPF4B-208ENST00000490653 EIF4G2P78344 907 aaKnown RBP eCLIP10.15□□□□□ -0.78
PRPF4B-208ENST00000490653 STK32BQ9NY57 414 aa10.15□□□□□ -0.78
PRPF4B-208ENST00000490653 NHSQ6T4R5 1651 aa10.15□□□□□ -0.79
PRPF4B-208ENST00000490653 C1QTNF8P60827 252 aa10.14□□□□□ -0.79
PRPF4B-208ENST00000490653 ARXQ96QS3 562 aa10.14□□□□□ -0.79
PRPF4B-208ENST00000490653 PANK3Q9H999 370 aa10.14□□□□□ -0.79
PRPF4B-208ENST00000490653 ABCC6O95255 1503 aa10.13□□□□□ -0.79
PRPF4B-208ENST00000490653 BHMG1C9JSJ3 638 aaPredicted RBP10.13□□□□□ -0.79
PRPF4B-208ENST00000490653 PPM1GO15355 546 aaPredicted RBP10.13□□□□□ -0.79
PRPF4B-208ENST00000490653 TNNT2P45379 298 aaPredicted RBP10.13□□□□□ -0.79
PRPF4B-208ENST00000490653 NLGN2Q8NFZ4 835 aa10.13□□□□□ -0.79
PRPF4B-208ENST00000490653 NSD2O96028 1365 aa10.13□□□□□ -0.79
PRPF4B-208ENST00000490653 PNPLA7Q6ZV29 1317 aa10.12□□□□□ -0.79
PRPF4B-208ENST00000490653 PTPREP23469 700 aa10.12□□□□□ -0.79
PRPF4B-208ENST00000490653 PDE4AP27815 886 aa10.12□□□□□ -0.79
PRPF4B-208ENST00000490653 PRIM1P49642 420 aaKnown RBP10.12□□□□□ -0.79
PRPF4B-208ENST00000490653 ZCRB1Q8TBF4 217 aaKnown RBP10.12□□□□□ -0.79
PRPF4B-208ENST00000490653 POLKQ9UBT6 870 aa10.12□□□□□ -0.79
PRPF4B-208ENST00000490653 MEGF6O75095 1541 aa10.12□□□□□ -0.79
PRPF4B-208ENST00000490653 FAM208AQ9UK61 1670 aaKnown RBP10.12□□□□□ -0.79
PRPF4B-208ENST00000490653 COL24A1Q17RW2 1714 aa10.11□□□□□ -0.79
PRPF4B-208ENST00000490653 SHANK3Q9BYB0 1731 aa10.11□□□□□ -0.79
PRPF4B-208ENST00000490653 SENP3-EIF4A1A0A087X0R7 540 aa10.11□□□□□ -0.79
PRPF4B-208ENST00000490653 ZBED2Q9BTP6 218 aa10.11□□□□□ -0.79
PRPF4B-208ENST00000490653 INSRP06213 1382 aa10.11□□□□□ -0.79
PRPF4B-208ENST00000490653 KIF20BQ96Q89 1820 aa10.1□□□□□ -0.79
PRPF4B-208ENST00000490653 YBX3P16989 372 aaKnown RBP eCLIP10.1□□□□□ -0.79
PRPF4B-208ENST00000490653 PTPN5P54829 565 aa10.1□□□□□ -0.79
PRPF4B-208ENST00000490653 EYA1Q99502 592 aa10.1□□□□□ -0.79
PRPF4B-208ENST00000490653 BTAF1O14981 1849 aa10.1□□□□□ -0.79
PRPF4B-208ENST00000490653 MAP2P11137 1827 aaKnown RBP10.1□□□□□ -0.79
PRPF4B-208ENST00000490653 EVI5O60447 810 aa10.09□□□□□ -0.79
PRPF4B-208ENST00000490653 THSD4Q6ZMP0 1018 aa10.09□□□□□ -0.79
PRPF4B-208ENST00000490653 SYTL4Q96C24 671 aaPredicted RBP10.09□□□□□ -0.79
PRPF4B-208ENST00000490653 WASHC2AQ641Q2 1341 aa10.08□□□□□ -0.8
PRPF4B-208ENST00000490653 CYP27B1O15528 508 aa10.08□□□□□ -0.8
PRPF4B-208ENST00000490653 TATP17735 454 aaPredicted RBP10.08□□□□□ -0.8
PRPF4B-208ENST00000490653 IFFO2Q5TF58 517 aa10.08□□□□□ -0.8
PRPF4B-208ENST00000490653 AMIGO3Q86WK7 504 aa10.08□□□□□ -0.8
PRPF4B-208ENST00000490653 RTL1A6NKG5 1358 aa10.08□□□□□ -0.8
PRPF4B-208ENST00000490653 FLT4P35916 1363 aa10.08□□□□□ -0.8
PRPF4B-208ENST00000490653 CGNL1Q0VF96 1302 aa10.07□□□□□ -0.8
PRPF4B-208ENST00000490653 GTPBP6O43824 516 aaPredicted RBP10.07□□□□□ -0.8
PRPF4B-208ENST00000490653 EIF4A2Q14240 407 aaKnown RBP10.07□□□□□ -0.8
PRPF4B-208ENST00000490653 RAPGEF4Q8WZA2 1011 aa10.07□□□□□ -0.8
PRPF4B-208ENST00000490653 ZDHHC16Q969W1 377 aa10.07□□□□□ -0.8
PRPF4B-208ENST00000490653 ADAM33Q9BZ11 813 aa10.07□□□□□ -0.8
PRPF4B-208ENST00000490653 TUBGCP6Q96RT7 1819 aa10.07□□□□□ -0.8
PRPF4B-208ENST00000490653 KIF7Q2M1P5 1343 aa10.06□□□□□ -0.8
PRPF4B-208ENST00000490653 MFSD10Q14728 455 aa10.05□□□□□ -0.8
PRPF4B-208ENST00000490653 SMIM5Q71RC9 77 aa10.05□□□□□ -0.8
PRPF4B-208ENST00000490653 COL23A1Q86Y22 540 aaPredicted RBP10.05□□□□□ -0.8
PRPF4B-208ENST00000490653 DDX27Q96GQ7 796 aaKnown RBP10.05□□□□□ -0.8
PRPF4B-208ENST00000490653 RGS20O76081 388 aa10.04□□□□□ -0.8
PRPF4B-208ENST00000490653 CNGB1Q14028 1251 aaPredicted RBP10.04□□□□□ -0.8
PRPF4B-208ENST00000490653 GPR162Q16538 588 aa10.04□□□□□ -0.8
PRPF4B-208ENST00000490653 MPRIPQ6WCQ1 1025 aa10.04□□□□□ -0.8
PRPF4B-208ENST00000490653 MORC1Q86VD1 984 aa10.04□□□□□ -0.8
PRPF4B-208ENST00000490653 MRPL50Q8N5N7 158 aaKnown RBP10.04□□□□□ -0.8
PRPF4B-208ENST00000490653 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
PRPF4B-208ENST00000490653 KIF24Q5T7B8 1368 aa10.03□□□□□ -0.8
PRPF4B-208ENST00000490653 GOLGA8CPA6NN73 597 aa10.03□□□□□ -0.8
PRPF4B-208ENST00000490653 PER1O15534 1290 aaPredicted RBP10.03□□□□□ -0.8
PRPF4B-208ENST00000490653 AMER1Q5JTC6 1135 aaPredicted RBP10.03□□□□□ -0.8
PRPF4B-208ENST00000490653 SMG6Q86US8 1419 aaKnown RBP10.03□□□□□ -0.8
PRPF4B-208ENST00000490653 DOT1LQ8TEK3 1739 aa10.03□□□□□ -0.8
PRPF4B-208ENST00000490653 WNT2BQ93097 391 aa10.03□□□□□ -0.8
PRPF4B-208ENST00000490653 ADCY9O60503 1353 aa10.02□□□□□ -0.8
PRPF4B-208ENST00000490653 QSER1Q2KHR3 1735 aa10.02□□□□□ -0.8
PRPF4B-208ENST00000490653 SLC27A3Q5K4L6 730 aa10.02□□□□□ -0.81
PRPF4B-208ENST00000490653 AEBP1Q8IUX7 1158 aa10.02□□□□□ -0.81
PRPF4B-208ENST00000490653 SLC16A10Q8TF71 515 aa10.02□□□□□ -0.81
PRPF4B-208ENST00000490653 PIGBQ92521 554 aa10.02□□□□□ -0.81
PRPF4B-208ENST00000490653 NBPF3Q9H094 633 aa10.02□□□□□ -0.81
PRPF4B-208ENST00000490653 KNSTRNQ9Y448 316 aa10.02□□□□□ -0.81
PRPF4B-208ENST00000490653 CHD4Q14839 1912 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms