RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 NARFQ9UHQ1 456 aa23.93■■□□□ 1.42
YIPF3-208ENST00000490447 ADAMTS7Q9UKP4 1686 aa23.92■■□□□ 1.42
YIPF3-208ENST00000490447 TEFQ10587 303 aa23.92■■□□□ 1.42
YIPF3-208ENST00000490447 GAS2L2Q8NHY3 880 aa23.92■■□□□ 1.42
YIPF3-208ENST00000490447 BRCA1P38398 1863 aaKnown RBP23.92■■□□□ 1.42
YIPF3-208ENST00000490447 COL3A1P02461 1466 aaPredicted RBP23.91■■□□□ 1.42
YIPF3-208ENST00000490447 CHRNA5P30532 468 aa23.91■■□□□ 1.42
YIPF3-208ENST00000490447 GNAT3A8MTJ3 354 aa23.9■■□□□ 1.42
YIPF3-208ENST00000490447 STARD3NLO95772 234 aa23.9■■□□□ 1.42
YIPF3-208ENST00000490447 C9orf131Q5VYM1 1079 aa23.9■■□□□ 1.42
YIPF3-208ENST00000490447 VIRMAQ69YN4 1812 aaKnown RBP23.9■■□□□ 1.42
YIPF3-208ENST00000490447 CANXP27824 592 aaKnown RBP23.89■■□□□ 1.42
YIPF3-208ENST00000490447 NFIXQ14938 502 aa23.88■■□□□ 1.41
YIPF3-208ENST00000490447 CFAP53Q96M91 514 aa23.88■■□□□ 1.41
YIPF3-208ENST00000490447 ARFGEF1Q9Y6D6 1849 aa23.88■■□□□ 1.41
YIPF3-208ENST00000490447 TOMM70O94826 608 aa23.87■■□□□ 1.41
YIPF3-208ENST00000490447 ZNF790Q6PG37 636 aa23.86■■□□□ 1.41
YIPF3-208ENST00000490447 A0A087WZG4 1122 aa23.85■■□□□ 1.41
YIPF3-208ENST00000490447 SERPINB2P05120 415 aa23.85■■□□□ 1.41
YIPF3-208ENST00000490447 TEX13AQ9BXU3 409 aaPredicted RBP23.85■■□□□ 1.41
YIPF3-208ENST00000490447 RNF181Q9P0P0 153 aa23.85■■□□□ 1.41
YIPF3-208ENST00000490447 UBR2Q8IWV8 1755 aa23.85■■□□□ 1.41
YIPF3-208ENST00000490447 NPM2Q86SE8 214 aaKnown RBP23.84■■□□□ 1.41
YIPF3-208ENST00000490447 C16orf71Q8IYS4 520 aaPredicted RBP23.84■■□□□ 1.41
YIPF3-208ENST00000490447 IL17REQ8NFR9 667 aa23.84■■□□□ 1.41
YIPF3-208ENST00000490447 ZNF496Q96IT1 587 aaPredicted RBP23.84■■□□□ 1.41
YIPF3-208ENST00000490447 NMRK2Q9NPI5 230 aa23.84■■□□□ 1.41
YIPF3-208ENST00000490447 HEG1Q9ULI3 1381 aa23.84■■□□□ 1.41
YIPF3-208ENST00000490447 BCL2L12Q9HB09 334 aa23.84■■□□□ 1.41
YIPF3-208ENST00000490447 ZNF330Q9Y3S2 320 aaPredicted RBP23.84■■□□□ 1.41
YIPF3-208ENST00000490447 EIF5P55010 431 aaKnown RBP23.83■■□□□ 1.4
YIPF3-208ENST00000490447 BICDL1Q6ZP65 573 aa23.83■■□□□ 1.4
YIPF3-208ENST00000490447 FMNL2Q96PY5 1086 aa23.83■■□□□ 1.4
YIPF3-208ENST00000490447 NUDCQ9Y266 331 aa23.83■■□□□ 1.4
YIPF3-208ENST00000490447 KDM2BQ8NHM5 1336 aa23.82■■□□□ 1.4
YIPF3-208ENST00000490447 PRKAR2BP31323 418 aa23.82■■□□□ 1.4
YIPF3-208ENST00000490447 APLP1P51693 650 aa23.81■■□□□ 1.4
YIPF3-208ENST00000490447 NRXN2Q9P2S2 1712 aa23.8■■□□□ 1.4
YIPF3-208ENST00000490447 BTBD11A6QL63 1104 aa23.8■■□□□ 1.4
YIPF3-208ENST00000490447 H0YIN7 160 aa23.8■■□□□ 1.4
YIPF3-208ENST00000490447 AFDNP55196 1824 aaKnown RBP23.79■■□□□ 1.4
YIPF3-208ENST00000490447 C2CD5Q86YS7 1000 aa23.79■■□□□ 1.4
YIPF3-208ENST00000490447 TTLL6Q8N841 843 aa23.79■■□□□ 1.4
YIPF3-208ENST00000490447 RSPH6AQ9H0K4 717 aa23.79■■□□□ 1.4
YIPF3-208ENST00000490447 CEMIPQ8WUJ3 1361 aa23.78■■□□□ 1.4
YIPF3-208ENST00000490447 IL6STP40189 918 aaPredicted RBP23.78■■□□□ 1.4
YIPF3-208ENST00000490447 PHACTR3Q96KR7 559 aa23.78■■□□□ 1.4
YIPF3-208ENST00000490447 RASSF7Q02833 373 aa23.77■■□□□ 1.4
YIPF3-208ENST00000490447 TBC1D9BQ66K14 1250 aa23.77■■□□□ 1.4
YIPF3-208ENST00000490447 RBM46Q8TBY0 533 aaKnown RBP23.77■■□□□ 1.4
YIPF3-208ENST00000490447 RTF1Q92541 710 aaKnown RBP23.77■■□□□ 1.4
YIPF3-208ENST00000490447 TBC1D2BQ9UPU7 963 aa23.77■■□□□ 1.4
YIPF3-208ENST00000490447 NPHP1O15259 732 aa23.76■■□□□ 1.39
YIPF3-208ENST00000490447 U2AF1L5P0DN76 240 aaPredicted RBP23.76■■□□□ 1.39
YIPF3-208ENST00000490447 U2AF1Q01081 240 aaKnown RBP eCLIP23.76■■□□□ 1.39
YIPF3-208ENST00000490447 CARMIL3Q8ND23 1372 aa23.75■■□□□ 1.39
YIPF3-208ENST00000490447 ZC3H4Q9UPT8 1303 aaKnown RBP23.75■■□□□ 1.39
YIPF3-208ENST00000490447 SIPA1L3O60292 1781 aaPredicted RBP23.75■■□□□ 1.39
YIPF3-208ENST00000490447 SCN7AQ01118 1682 aa23.74■■□□□ 1.39
YIPF3-208ENST00000490447 LMNB1P20700 586 aa23.74■■□□□ 1.39
YIPF3-208ENST00000490447 PDE6BP35913 854 aa23.74■■□□□ 1.39
YIPF3-208ENST00000490447 PDZRN3Q9UPQ7 1066 aa23.74■■□□□ 1.39
YIPF3-208ENST00000490447 A1BGP04217 495 aa23.73■■□□□ 1.39
YIPF3-208ENST00000490447 PPP2R1AP30153 589 aa23.73■■□□□ 1.39
YIPF3-208ENST00000490447 RRAGCQ9HB90 399 aa23.73■■□□□ 1.39
YIPF3-208ENST00000490447 DLEC1Q9Y238 1755 aa23.72■■□□□ 1.39
YIPF3-208ENST00000490447 ZNF622Q969S3 477 aaKnown RBP eCLIP23.72■■□□□ 1.39
YIPF3-208ENST00000490447 SETDB2Q96T68 719 aa23.72■■□□□ 1.39
YIPF3-208ENST00000490447 BRIP1Q9BX63 1249 aa23.72■■□□□ 1.39
YIPF3-208ENST00000490447 KCNQ3O43525 872 aa23.71■■□□□ 1.39
YIPF3-208ENST00000490447 FSTL1Q12841 308 aa23.71■■□□□ 1.39
YIPF3-208ENST00000490447 PRR5LQ6MZQ0 368 aa23.71■■□□□ 1.39
YIPF3-208ENST00000490447 MCM10Q7L590 875 aa23.7■■□□□ 1.38
YIPF3-208ENST00000490447 DZIP3Q86Y13 1208 aaKnown RBP23.7■■□□□ 1.38
YIPF3-208ENST00000490447 CNBD1Q8NA66 436 aa23.7■■□□□ 1.38
YIPF3-208ENST00000490447 TNRC6CQ9HCJ0 1690 aaKnown RBP23.7■■□□□ 1.38
YIPF3-208ENST00000490447 ST5P78524 1137 aa23.69■■□□□ 1.38
YIPF3-208ENST00000490447 IFFO2Q5TF58 517 aa23.69■■□□□ 1.38
YIPF3-208ENST00000490447 SBF1O95248 1867 aa23.69■■□□□ 1.38
YIPF3-208ENST00000490447 CAMTA2O94983 1202 aa23.68■■□□□ 1.38
YIPF3-208ENST00000490447 CCDC24Q8N4L8 307 aa23.68■■□□□ 1.38
YIPF3-208ENST00000490447 USP16Q9Y5T5 823 aa23.68■■□□□ 1.38
YIPF3-208ENST00000490447 NEFMP07197 916 aa23.67■■□□□ 1.38
YIPF3-208ENST00000490447 SNRPA1P09661 255 aaKnown RBP23.67■■□□□ 1.38
YIPF3-208ENST00000490447 GLTPD2A6NH11 291 aa23.66■■□□□ 1.38
YIPF3-208ENST00000490447 ZNF219Q9P2Y4 722 aaPredicted RBP23.66■■□□□ 1.38
YIPF3-208ENST00000490447 ZNF652Q9Y2D9 606 aa23.66■■□□□ 1.38
YIPF3-208ENST00000490447 NFKBIEO00221 500 aa23.65■■□□□ 1.38
YIPF3-208ENST00000490447 HTATSF1O43719 755 aaKnown RBP23.65■■□□□ 1.38
YIPF3-208ENST00000490447 C21orf2O43822 256 aa23.65■■□□□ 1.38
YIPF3-208ENST00000490447 PIP4K2AP48426 406 aaPredicted RBP23.65■■□□□ 1.38
YIPF3-208ENST00000490447 SMC1BQ8NDV3 1235 aa23.65■■□□□ 1.38
YIPF3-208ENST00000490447 PRELPP51888 382 aa23.64■■□□□ 1.38
YIPF3-208ENST00000490447 DCTN1Q14203 1278 aa23.64■■□□□ 1.38
YIPF3-208ENST00000490447 PRAMEF22A3QJZ6 481 aa23.63■■□□□ 1.37
YIPF3-208ENST00000490447 VEGFAP15692 232 aaPredicted RBP23.63■■□□□ 1.37
YIPF3-208ENST00000490447 DNAJC5GQ8N7S2 189 aa23.63■■□□□ 1.37
YIPF3-208ENST00000490447 CNKSR1Q969H4 720 aa23.63■■□□□ 1.37
YIPF3-208ENST00000490447 ANKRD31Q8N7Z5 1873 aa23.63■■□□□ 1.37
YIPF3-208ENST00000490447 WDR90Q96KV7 1748 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms