RNA–Protein interactions for RNA: ENST00000490305.5

HLA-DOA-205, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-205ENST00000490305 DDX21Q9NR30 783 aaKnown RBP eCLIP16.84■□□□□ 0.29
HLA-DOA-205ENST00000490305 HYPKQ9NX55 129 aa16.84■□□□□ 0.29
HLA-DOA-205ENST00000490305 DDX19BQ9UMR2 479 aa16.84■□□□□ 0.29
HLA-DOA-205ENST00000490305 TNNQ9UQP3 1299 aa16.84■□□□□ 0.29
HLA-DOA-205ENST00000490305 ERBB4Q15303 1308 aa16.84■□□□□ 0.29
HLA-DOA-205ENST00000490305 RBM6P78332 1123 aaKnown RBP16.83■□□□□ 0.28
HLA-DOA-205ENST00000490305 CHPF2Q9P2E5 772 aa16.83■□□□□ 0.28
HLA-DOA-205ENST00000490305 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
HLA-DOA-205ENST00000490305 PRAMEF22A3QJZ6 481 aa16.82■□□□□ 0.28
HLA-DOA-205ENST00000490305 G2E3Q7L622 706 aa16.82■□□□□ 0.28
HLA-DOA-205ENST00000490305 ITPRIPQ8IWB1 547 aa16.82■□□□□ 0.28
HLA-DOA-205ENST00000490305 TMEM57Q8N5G2 664 aa16.82■□□□□ 0.28
HLA-DOA-205ENST00000490305 SMARCC1Q92922 1105 aaPredicted RBP16.82■□□□□ 0.28
HLA-DOA-205ENST00000490305 CCDC136Q96JN2 1154 aa16.82■□□□□ 0.28
HLA-DOA-205ENST00000490305 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
HLA-DOA-205ENST00000490305 FKBP5Q13451 457 aaPredicted RBP16.81■□□□□ 0.28
HLA-DOA-205ENST00000490305 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
HLA-DOA-205ENST00000490305 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
HLA-DOA-205ENST00000490305 RGS12O14924 1447 aa16.8■□□□□ 0.28
HLA-DOA-205ENST00000490305 INTS3Q68E01 1043 aaKnown RBP16.8■□□□□ 0.28
HLA-DOA-205ENST00000490305 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
HLA-DOA-205ENST00000490305 NHSQ6T4R5 1651 aa16.79■□□□□ 0.28
HLA-DOA-205ENST00000490305 CCT4P50991 539 aaKnown RBP16.79■□□□□ 0.28
HLA-DOA-205ENST00000490305 PHAXQ9H814 394 aaKnown RBP16.79■□□□□ 0.28
HLA-DOA-205ENST00000490305 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
HLA-DOA-205ENST00000490305 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
HLA-DOA-205ENST00000490305 PDIA6Q15084 440 aa16.78■□□□□ 0.28
HLA-DOA-205ENST00000490305 N4BP2Q86UW6 1770 aaPredicted RBP16.78■□□□□ 0.28
HLA-DOA-205ENST00000490305 BRWD3Q6RI45 1802 aa16.77■□□□□ 0.28
HLA-DOA-205ENST00000490305 SBF2Q86WG5 1849 aa16.77■□□□□ 0.28
HLA-DOA-205ENST00000490305 STARD3NLO95772 234 aa16.77■□□□□ 0.28
HLA-DOA-205ENST00000490305 B4GALNT3Q6L9W6 998 aa16.77■□□□□ 0.28
HLA-DOA-205ENST00000490305 ZNF831Q5JPB2 1677 aa16.76■□□□□ 0.27
HLA-DOA-205ENST00000490305 RXRBP28702 533 aa16.76■□□□□ 0.27
HLA-DOA-205ENST00000490305 PROSER3Q2NL68 480 aa16.76■□□□□ 0.27
HLA-DOA-205ENST00000490305 KRT27Q7Z3Y8 459 aa16.76■□□□□ 0.27
HLA-DOA-205ENST00000490305 CICQ96RK0 1608 aaPredicted RBP16.76■□□□□ 0.27
HLA-DOA-205ENST00000490305 KCNQ2O43526 872 aa16.75■□□□□ 0.27
HLA-DOA-205ENST00000490305 ANXA1P04083 346 aa16.75■□□□□ 0.27
HLA-DOA-205ENST00000490305 MYL6BP14649 208 aa16.75■□□□□ 0.27
HLA-DOA-205ENST00000490305 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
HLA-DOA-205ENST00000490305 KSR2Q6VAB6 950 aa16.75■□□□□ 0.27
HLA-DOA-205ENST00000490305 FAM196AQ6ZSG2 479 aa16.75■□□□□ 0.27
HLA-DOA-205ENST00000490305 DNAJC10Q8IXB1 793 aa16.75■□□□□ 0.27
HLA-DOA-205ENST00000490305 PALLDQ8WX93 1383 aa16.75■□□□□ 0.27
HLA-DOA-205ENST00000490305 BTAF1O14981 1849 aa16.75■□□□□ 0.27
HLA-DOA-205ENST00000490305 TJP1Q07157 1748 aa16.74■□□□□ 0.27
HLA-DOA-205ENST00000490305 F6X3S4 739 aa16.74■□□□□ 0.27
HLA-DOA-205ENST00000490305 ZBTB7BO15156 539 aaPredicted RBP16.74■□□□□ 0.27
HLA-DOA-205ENST00000490305 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
HLA-DOA-205ENST00000490305 ZBTB40Q9NUA8 1239 aa16.74■□□□□ 0.27
HLA-DOA-205ENST00000490305 LOC102724428A0A0B4J2F2 783 aa16.73■□□□□ 0.27
HLA-DOA-205ENST00000490305 PI4KAP2A4QPH2 592 aa16.73■□□□□ 0.27
HLA-DOA-205ENST00000490305 SIK1P57059 783 aa16.73■□□□□ 0.27
HLA-DOA-205ENST00000490305 PI4KAP1Q8N8J0 262 aa16.73■□□□□ 0.27
HLA-DOA-205ENST00000490305 ATP10DQ9P241 1426 aa16.72■□□□□ 0.27
HLA-DOA-205ENST00000490305 CYP19A1P11511 503 aaPredicted RBP16.72■□□□□ 0.27
HLA-DOA-205ENST00000490305 COPS6Q7L5N1 327 aa16.72■□□□□ 0.27
HLA-DOA-205ENST00000490305 LRP10Q7Z4F1 713 aa16.72■□□□□ 0.27
HLA-DOA-205ENST00000490305 XAGE3Q8WTP9 111 aa16.72■□□□□ 0.27
HLA-DOA-205ENST00000490305 ADCY9O60503 1353 aa16.72■□□□□ 0.27
HLA-DOA-205ENST00000490305 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 A1BGP04217 495 aa16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 ATP6V1AP38606 617 aa16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 AIMP1Q12904 312 aaKnown RBP16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 FAM182BQ5T319 152 aa16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 SLC4A9Q96Q91 983 aa16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 SRCIN1Q9C0H9 1055 aa16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 BCL11BQ9C0K0 894 aaPredicted RBP16.71■□□□□ 0.27
HLA-DOA-205ENST00000490305 MAP3K2Q9Y2U5 619 aa16.7■□□□□ 0.26
HLA-DOA-205ENST00000490305 ALDH1L1O75891 902 aa16.69■□□□□ 0.26
HLA-DOA-205ENST00000490305 ANKRD13DQ6ZTN6 518 aa16.69■□□□□ 0.26
HLA-DOA-205ENST00000490305 CENPQQ7L2Z9 268 aaPredicted RBP16.69■□□□□ 0.26
HLA-DOA-205ENST00000490305 PLBD2Q8NHP8 589 aa16.69■□□□□ 0.26
HLA-DOA-205ENST00000490305 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
HLA-DOA-205ENST00000490305 RGS17Q9UGC6 210 aaPredicted RBP16.69■□□□□ 0.26
HLA-DOA-205ENST00000490305 IBTKQ9P2D0 1353 aaPredicted RBP16.68■□□□□ 0.26
HLA-DOA-205ENST00000490305 GNAI3P08754 354 aa16.68■□□□□ 0.26
HLA-DOA-205ENST00000490305 NEXNQ0ZGT2 675 aa16.68■□□□□ 0.26
HLA-DOA-205ENST00000490305 BEND3Q5T5X7 828 aa16.68■□□□□ 0.26
HLA-DOA-205ENST00000490305 ARFGEF2Q9Y6D5 1785 aa16.68■□□□□ 0.26
HLA-DOA-205ENST00000490305 RREB1Q92766 1687 aa16.68■□□□□ 0.26
HLA-DOA-205ENST00000490305 LY75O60449 1722 aa16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 IL6STP40189 918 aaPredicted RBP16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 NPM2Q86SE8 214 aaKnown RBP16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 PELP1Q8IZL8 1130 aaKnown RBP16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 LINS1Q8NG48 757 aa16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 METTL22Q9BUU2 404 aaPredicted RBP16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 PCDHB15Q9Y5E8 787 aa16.67■□□□□ 0.26
HLA-DOA-205ENST00000490305 HMGB2P26583 209 aaKnown RBP16.66■□□□□ 0.26
HLA-DOA-205ENST00000490305 HDAC1Q13547 482 aaPredicted RBP16.66■□□□□ 0.26
HLA-DOA-205ENST00000490305 POTEAQ6S8J7 498 aa16.66■□□□□ 0.26
HLA-DOA-205ENST00000490305 KIF6Q6ZMV9 814 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms