RNA–Protein interactions for RNA: ENST00000490108.1

TSC2-215, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-215ENST00000490108 BRCA1P38398 1863 aaKnown RBP26.81■■□□□ 1.88
TSC2-215ENST00000490108 PPP2R1AP30153 589 aa26.81■■□□□ 1.88
TSC2-215ENST00000490108 RSPH6AQ9H0K4 717 aa26.81■■□□□ 1.88
TSC2-215ENST00000490108 GPBP1L1Q9HC44 474 aaPredicted RBP26.81■■□□□ 1.88
TSC2-215ENST00000490108 NUDCQ9Y266 331 aa26.81■■□□□ 1.88
TSC2-215ENST00000490108 FCHSD2O94868 740 aa26.8■■□□□ 1.88
TSC2-215ENST00000490108 PHACTR3Q96KR7 559 aa26.8■■□□□ 1.88
TSC2-215ENST00000490108 POLRMTO00411 1230 aaKnown RBP26.79■■□□□ 1.88
TSC2-215ENST00000490108 U2AF1L5P0DN76 240 aaPredicted RBP26.78■■□□□ 1.88
TSC2-215ENST00000490108 CANXP27824 592 aaKnown RBP26.78■■□□□ 1.88
TSC2-215ENST00000490108 U2AF1Q01081 240 aaKnown RBP eCLIP26.78■■□□□ 1.88
TSC2-215ENST00000490108 ZNF496Q96IT1 587 aaPredicted RBP26.78■■□□□ 1.88
TSC2-215ENST00000490108 STARD3NLO95772 234 aa26.77■■□□□ 1.88
TSC2-215ENST00000490108 ZNF790Q6PG37 636 aa26.77■■□□□ 1.88
TSC2-215ENST00000490108 NARFQ9UHQ1 456 aa26.77■■□□□ 1.88
TSC2-215ENST00000490108 HEG1Q9ULI3 1381 aa26.76■■□□□ 1.87
TSC2-215ENST00000490108 TM4SF1P30408 202 aa26.76■■□□□ 1.87
TSC2-215ENST00000490108 ARHGAP27Q6ZUM4 889 aa26.76■■□□□ 1.87
TSC2-215ENST00000490108 CEMIPQ8WUJ3 1361 aa26.75■■□□□ 1.87
TSC2-215ENST00000490108 KCNA3P22001 575 aa26.75■■□□□ 1.87
TSC2-215ENST00000490108 CHRNA5P30532 468 aa26.74■■□□□ 1.87
TSC2-215ENST00000490108 NFIXQ14938 502 aa26.74■■□□□ 1.87
TSC2-215ENST00000490108 PIM2Q9P1W9 311 aa26.74■■□□□ 1.87
TSC2-215ENST00000490108 AFDNP55196 1824 aaKnown RBP26.73■■□□□ 1.87
TSC2-215ENST00000490108 ARFGEF1Q9Y6D6 1849 aa26.73■■□□□ 1.87
TSC2-215ENST00000490108 FMNL2Q96PY5 1086 aa26.72■■□□□ 1.87
TSC2-215ENST00000490108 BCL2L12Q9HB09 334 aa26.72■■□□□ 1.87
TSC2-215ENST00000490108 ZNF330Q9Y3S2 320 aaPredicted RBP26.72■■□□□ 1.87
TSC2-215ENST00000490108 DALRD3Q5D0E6 543 aaKnown RBP26.71■■□□□ 1.87
TSC2-215ENST00000490108 A0A087WZG4 1122 aa26.7■■□□□ 1.86
TSC2-215ENST00000490108 BTBD11A6QL63 1104 aa26.7■■□□□ 1.86
TSC2-215ENST00000490108 KCNQ3O43525 872 aa26.7■■□□□ 1.86
TSC2-215ENST00000490108 TEX13AQ9BXU3 409 aaPredicted RBP26.7■■□□□ 1.86
TSC2-215ENST00000490108 NRXN2Q9P2S2 1712 aa26.7■■□□□ 1.86
TSC2-215ENST00000490108 SCN7AQ01118 1682 aa26.7■■□□□ 1.86
TSC2-215ENST00000490108 EIF5P55010 431 aaKnown RBP26.69■■□□□ 1.86
TSC2-215ENST00000490108 RTF1Q92541 710 aaKnown RBP26.69■■□□□ 1.86
TSC2-215ENST00000490108 SERPINB2P05120 415 aa26.68■■□□□ 1.86
TSC2-215ENST00000490108 BICDL1Q6ZP65 573 aa26.68■■□□□ 1.86
TSC2-215ENST00000490108 MCM10Q7L590 875 aa26.68■■□□□ 1.86
TSC2-215ENST00000490108 CARMIL3Q8ND23 1372 aa26.64■■□□□ 1.86
TSC2-215ENST00000490108 A1BGP04217 495 aa26.64■■□□□ 1.86
TSC2-215ENST00000490108 DCTN1Q14203 1278 aa26.64■■□□□ 1.86
TSC2-215ENST00000490108 C9orf131Q5VYM1 1079 aa26.64■■□□□ 1.86
TSC2-215ENST00000490108 TBC1D2BQ9UPU7 963 aa26.64■■□□□ 1.86
TSC2-215ENST00000490108 IL6STP40189 918 aaPredicted RBP26.63■■□□□ 1.85
TSC2-215ENST00000490108 NPM2Q86SE8 214 aaKnown RBP26.63■■□□□ 1.85
TSC2-215ENST00000490108 DLEC1Q9Y238 1755 aa26.62■■□□□ 1.85
TSC2-215ENST00000490108 TBC1D9BQ66K14 1250 aa26.62■■□□□ 1.85
TSC2-215ENST00000490108 KIF3CO14782 793 aa26.61■■□□□ 1.85
TSC2-215ENST00000490108 C2CD5Q86YS7 1000 aa26.6■■□□□ 1.85
TSC2-215ENST00000490108 PRAMEF22A3QJZ6 481 aa26.59■■□□□ 1.85
TSC2-215ENST00000490108 PIP4K2AP48426 406 aaPredicted RBP26.59■■□□□ 1.85
TSC2-215ENST00000490108 BCORQ6W2J9 1755 aa26.58■■□□□ 1.85
TSC2-215ENST00000490108 HTATSF1O43719 755 aaKnown RBP26.58■■□□□ 1.85
TSC2-215ENST00000490108 NEFMP07197 916 aa26.58■■□□□ 1.85
TSC2-215ENST00000490108 RNF181Q9P0P0 153 aa26.58■■□□□ 1.85
TSC2-215ENST00000490108 USP16Q9Y5T5 823 aa26.58■■□□□ 1.85
TSC2-215ENST00000490108 CAMTA2O94983 1202 aa26.57■■□□□ 1.84
TSC2-215ENST00000490108 SNRPA1P09661 255 aaKnown RBP26.57■■□□□ 1.84
TSC2-215ENST00000490108 ANKRD31Q8N7Z5 1873 aa26.56■■□□□ 1.84
TSC2-215ENST00000490108 H0YIN7 160 aa26.56■■□□□ 1.84
TSC2-215ENST00000490108 DZIP3Q86Y13 1208 aaKnown RBP26.56■■□□□ 1.84
TSC2-215ENST00000490108 DLG5Q8TDM6 1919 aa26.55■■□□□ 1.84
TSC2-215ENST00000490108 RASSF7Q02833 373 aa26.55■■□□□ 1.84
TSC2-215ENST00000490108 CCDC24Q8N4L8 307 aa26.55■■□□□ 1.84
TSC2-215ENST00000490108 TTLL6Q8N841 843 aa26.55■■□□□ 1.84
TSC2-215ENST00000490108 NMRK2Q9NPI5 230 aa26.55■■□□□ 1.84
TSC2-215ENST00000490108 PRR5LQ6MZQ0 368 aa26.54■■□□□ 1.84
TSC2-215ENST00000490108 CEP350Q5VT06 3117 aa26.54■■□□□ 1.84
TSC2-215ENST00000490108 COL11A2P13942 1736 aaPredicted RBP26.53■■□□□ 1.84
TSC2-215ENST00000490108 NPHP1O15259 732 aa26.53■■□□□ 1.84
TSC2-215ENST00000490108 HSPA6P17066 643 aa26.53■■□□□ 1.84
TSC2-215ENST00000490108 TAF7Q15545 349 aaPredicted RBP26.53■■□□□ 1.84
TSC2-215ENST00000490108 SBF1O95248 1867 aa26.53■■□□□ 1.84
TSC2-215ENST00000490108 SETDB2Q96T68 719 aa26.52■■□□□ 1.84
TSC2-215ENST00000490108 MIS18AQ9NYP9 233 aa26.52■■□□□ 1.84
TSC2-215ENST00000490108 CNBD1Q8NA66 436 aa26.51■■□□□ 1.83
TSC2-215ENST00000490108 ZNF622Q969S3 477 aaKnown RBP eCLIP26.51■■□□□ 1.83
TSC2-215ENST00000490108 LAMB4A4D0S4 1761 aa26.51■■□□□ 1.83
TSC2-215ENST00000490108 PDE6BP35913 854 aa26.5■■□□□ 1.83
TSC2-215ENST00000490108 BRIP1Q9BX63 1249 aa26.5■■□□□ 1.83
TSC2-215ENST00000490108 KDM3BQ7LBC6 1761 aa26.49■■□□□ 1.83
TSC2-215ENST00000490108 MAPK8IP3Q9UPT6 1336 aa26.49■■□□□ 1.83
TSC2-215ENST00000490108 NFE2L2Q16236 605 aa26.49■■□□□ 1.83
TSC2-215ENST00000490108 PLEKHF1Q96S99 279 aa26.49■■□□□ 1.83
TSC2-215ENST00000490108 ST5P78524 1137 aa26.48■■□□□ 1.83
TSC2-215ENST00000490108 KDM2BQ8NHM5 1336 aa26.47■■□□□ 1.83
TSC2-215ENST00000490108 NBPF26B4DH59 902 aa26.47■■□□□ 1.83
TSC2-215ENST00000490108 TOMM70O94826 608 aa26.47■■□□□ 1.83
TSC2-215ENST00000490108 NBPF10Q6P3W6 841 aaKnown RBP26.47■■□□□ 1.83
TSC2-215ENST00000490108 NBPF15Q8N660 670 aa26.47■■□□□ 1.83
TSC2-215ENST00000490108 THUMPD2Q9BTF0 503 aaKnown RBP26.47■■□□□ 1.83
TSC2-215ENST00000490108 ZNF219Q9P2Y4 722 aaPredicted RBP26.47■■□□□ 1.83
TSC2-215ENST00000490108 ZNF652Q9Y2D9 606 aa26.47■■□□□ 1.83
TSC2-215ENST00000490108 LMNB1P20700 586 aa26.46■■□□□ 1.83
TSC2-215ENST00000490108 PDZRN3Q9UPQ7 1066 aa26.46■■□□□ 1.83
TSC2-215ENST00000490108 C16orf71Q8IYS4 520 aaPredicted RBP26.45■■□□□ 1.82
TSC2-215ENST00000490108 PNISRQ8TF01 805 aaKnown RBP26.45■■□□□ 1.82
TSC2-215ENST00000490108 PNNQ9H307 717 aaKnown RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms