RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 UQCRHP07919 91 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 FERMT1Q9BQL6 677 aa10.28□□□□□ -0.76
LSAMP-205ENST00000490035 KIF5BP33176 963 aa10.27□□□□□ -0.76
LSAMP-205ENST00000490035 CTCFLQ8NI51 663 aaPredicted RBP10.27□□□□□ -0.76
LSAMP-205ENST00000490035 EVI5LQ96CN4 794 aa10.27□□□□□ -0.76
LSAMP-205ENST00000490035 CDCA7LQ96GN5 454 aa10.27□□□□□ -0.76
LSAMP-205ENST00000490035 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
LSAMP-205ENST00000490035 HOOK3Q86VS8 718 aa10.27□□□□□ -0.77
LSAMP-205ENST00000490035 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
LSAMP-205ENST00000490035 PLVAPQ9BX97 442 aa10.27□□□□□ -0.77
LSAMP-205ENST00000490035 FMNL3Q8IVF7 1028 aa10.27□□□□□ -0.77
LSAMP-205ENST00000490035 NUP133Q8WUM0 1156 aa10.27□□□□□ -0.77
LSAMP-205ENST00000490035 PAXBP1Q9Y5B6 917 aa10.27□□□□□ -0.77
LSAMP-205ENST00000490035 UNC13AQ9UPW8 1703 aa10.27□□□□□ -0.77
LSAMP-205ENST00000490035 MPHOSPH10O00566 681 aaKnown RBP10.27□□□□□ -0.77
LSAMP-205ENST00000490035 CWC27Q6UX04 472 aaKnown RBP10.27□□□□□ -0.77
LSAMP-205ENST00000490035 RPRD2Q5VT52 1461 aaKnown RBP10.27□□□□□ -0.77
LSAMP-205ENST00000490035 LIMCH1Q9UPQ0 1083 aa10.26□□□□□ -0.77
LSAMP-205ENST00000490035 NUP160Q12769 1436 aa10.26□□□□□ -0.77
LSAMP-205ENST00000490035 C8orf76Q96K31 380 aa10.26□□□□□ -0.77
LSAMP-205ENST00000490035 CEBPZQ03701 1054 aaKnown RBP10.26□□□□□ -0.77
LSAMP-205ENST00000490035 PPM1EQ8WY54 764 aa10.26□□□□□ -0.77
LSAMP-205ENST00000490035 CALCOCO1Q9P1Z2 691 aa10.26□□□□□ -0.77
LSAMP-205ENST00000490035 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
LSAMP-205ENST00000490035 NAPBQ9H115 298 aa10.26□□□□□ -0.77
LSAMP-205ENST00000490035 GIGYF2Q6Y7W6 1299 aaKnown RBP10.26□□□□□ -0.77
LSAMP-205ENST00000490035 ALS2CR12Q96Q35 445 aa10.26□□□□□ -0.77
LSAMP-205ENST00000490035 BCAR3O75815 825 aa10.26□□□□□ -0.77
LSAMP-205ENST00000490035 BAG4O95429 457 aaKnown RBP10.26□□□□□ -0.77
LSAMP-205ENST00000490035 SLC5A1P13866 664 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 BBXQ8WY36 941 aaPredicted RBP10.25□□□□□ -0.77
LSAMP-205ENST00000490035 CUL5Q93034 780 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 MPHOSPH6Q99547 160 aaKnown RBP10.25□□□□□ -0.77
LSAMP-205ENST00000490035 ZHX3Q9H4I2 956 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 SOS1Q07889 1333 aaPredicted RBP10.25□□□□□ -0.77
LSAMP-205ENST00000490035 TOP1P11387 765 aaKnown RBP10.25□□□□□ -0.77
LSAMP-205ENST00000490035 CACNA2D4Q7Z3S7 1137 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 YEATS4O95619 227 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 ATP2B2Q01814 1243 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 TMTC2Q8N394 836 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 DUOX2Q9NRD8 1548 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 RAPGEF6Q8TEU7 1601 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 NEBLO76041 1014 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 MAP2K1Q02750 393 aaPredicted RBP10.25□□□□□ -0.77
LSAMP-205ENST00000490035 STX1AQ16623 288 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 DBF4Q9UBU7 674 aaPredicted RBP10.25□□□□□ -0.77
LSAMP-205ENST00000490035 CATIPQ7Z7H3 387 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 PRDM11Q9NQV5 511 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 ASXL1Q8IXJ9 1541 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 CTAGE1Q96RT6 745 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 ANKRD18BA2A2Z9 1011 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 ANKRD62A6NC57 917 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 SPTY2D1Q68D10 685 aaPredicted RBP10.25□□□□□ -0.77
LSAMP-205ENST00000490035 USP37Q86T82 979 aa10.25□□□□□ -0.77
LSAMP-205ENST00000490035 BMP2KLQ5H9B9 411 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 LUZP1Q86V48 1076 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 RMND1Q9NWS8 449 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 ZNF213O14771 459 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 METTL24Q5JXM2 366 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 TSR2Q969E8 191 aaKnown RBP10.24□□□□□ -0.77
LSAMP-205ENST00000490035 NUDT16Q96DE0 195 aaKnown RBP10.24□□□□□ -0.77
LSAMP-205ENST00000490035 TUBBP07437 444 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 RAI14Q9P0K7 980 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 SSRP1Q08945 709 aaKnown RBP10.24□□□□□ -0.77
LSAMP-205ENST00000490035 C1orf115Q9H7X2 142 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 TTC12Q9H892 705 aaPredicted RBP10.24□□□□□ -0.77
LSAMP-205ENST00000490035 IFIT5Q13325 482 aaKnown RBP10.24□□□□□ -0.77
LSAMP-205ENST00000490035 SMC1AQ14683 1233 aaKnown RBP10.24□□□□□ -0.77
LSAMP-205ENST00000490035 PRIMPOLQ96LW4 560 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 ANKRD36BQ8N2N9 1353 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 CFAP43Q8NDM7 1665 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 MYL6BP14649 208 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 ANAPC15P60006 121 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 MKNK2Q9HBH9 465 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 UBE2HP62256 183 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 STK3Q13188 491 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 DUSP27Q5VZP5 1158 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 DYDC1Q8WWB3 177 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 ARHGAP45Q92619 1136 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 CALML4Q96GE6 196 aa10.24□□□□□ -0.77
LSAMP-205ENST00000490035 CCDC102AQ96A19 550 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 PRPHP41219 470 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
LSAMP-205ENST00000490035 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 LRRC45Q96CN5 670 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 TCP11L1Q9NUJ3 509 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 ADGRL1O94910 1474 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 LDHCP07864 332 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 SLC12A7Q9Y666 1083 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 ZFYP08048 801 aaPredicted RBP10.23□□□□□ -0.77
LSAMP-205ENST00000490035 PRKCSHP14314 528 aaPredicted RBP10.23□□□□□ -0.77
LSAMP-205ENST00000490035 NBPF1Q3BBV0 1214 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 SIL1Q9H173 461 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 RBM27Q9P2N5 1060 aaKnown RBP10.23□□□□□ -0.77
LSAMP-205ENST00000490035 PIK3R4Q99570 1358 aa10.23□□□□□ -0.77
LSAMP-205ENST00000490035 ZGPATQ8N5A5 531 aaKnown RBP10.23□□□□□ -0.77
LSAMP-205ENST00000490035 ZPR1O75312 459 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 RARSP54136 660 aaKnown RBP10.22□□□□□ -0.77
LSAMP-205ENST00000490035 TAX1BP1Q86VP1 789 aa10.22□□□□□ -0.77
LSAMP-205ENST00000490035 MATR3P43243 847 aaKnown RBP eCLIP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms