RNA–Protein interactions for RNA: ENST00000489856.1

CAV1-208, Transcript of caveolin 1, humanhuman

TSL 2

Gene CAV1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAV1-208ENST00000489856 SHANK3Q9BYB0 1731 aa12.9□□□□□ -0.34
CAV1-208ENST00000489856 KAT6BQ8WYB5 2073 aa12.9□□□□□ -0.34
CAV1-208ENST00000489856 CYP27B1O15528 508 aa12.89□□□□□ -0.35
CAV1-208ENST00000489856 AMOTQ4VCS5 1084 aa12.89□□□□□ -0.35
CAV1-208ENST00000489856 PLEKHO1Q53GL0 409 aaPredicted RBP12.89□□□□□ -0.35
CAV1-208ENST00000489856 OXER1Q8TDS5 423 aa12.89□□□□□ -0.35
CAV1-208ENST00000489856 ARIH1Q9Y4X5 557 aaPredicted RBP12.89□□□□□ -0.35
CAV1-208ENST00000489856 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
CAV1-208ENST00000489856 TNS1Q9HBL0 1735 aaKnown RBP12.88□□□□□ -0.35
CAV1-208ENST00000489856 DPYSL4O14531 572 aa12.88□□□□□ -0.35
CAV1-208ENST00000489856 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
CAV1-208ENST00000489856 APBA3O96018 575 aa12.88□□□□□ -0.35
CAV1-208ENST00000489856 DEFB132Q7Z7B7 95 aa12.88□□□□□ -0.35
CAV1-208ENST00000489856 PTCD2Q8WV60 388 aaKnown RBP12.88□□□□□ -0.35
CAV1-208ENST00000489856 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
CAV1-208ENST00000489856 HMOX1P09601 288 aa12.87□□□□□ -0.35
CAV1-208ENST00000489856 MAP3K9P80192 1104 aa12.87□□□□□ -0.35
CAV1-208ENST00000489856 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
CAV1-208ENST00000489856 ACSBG1Q96GR2 724 aa12.87□□□□□ -0.35
CAV1-208ENST00000489856 RIMBP2O15034 1052 aa12.86□□□□□ -0.35
CAV1-208ENST00000489856 PLSCR1O15162 318 aa12.86□□□□□ -0.35
CAV1-208ENST00000489856 KCNQ2O43526 872 aa12.86□□□□□ -0.35
CAV1-208ENST00000489856 TBC1D12O60347 775 aa12.86□□□□□ -0.35
CAV1-208ENST00000489856 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
CAV1-208ENST00000489856 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
CAV1-208ENST00000489856 PHKG2P15735 406 aa12.85□□□□□ -0.35
CAV1-208ENST00000489856 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
CAV1-208ENST00000489856 ZNF530Q6P9A1 599 aaPredicted RBP12.85□□□□□ -0.35
CAV1-208ENST00000489856 PTF1AQ7RTS3 328 aa12.85□□□□□ -0.35
CAV1-208ENST00000489856 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
CAV1-208ENST00000489856 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
CAV1-208ENST00000489856 FCHSD2O94868 740 aa12.84□□□□□ -0.35
CAV1-208ENST00000489856 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
CAV1-208ENST00000489856 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
CAV1-208ENST00000489856 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
CAV1-208ENST00000489856 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
CAV1-208ENST00000489856 NBR1Q14596 966 aa12.83□□□□□ -0.36
CAV1-208ENST00000489856 C1orf141Q5JVX7 400 aa12.83□□□□□ -0.36
CAV1-208ENST00000489856 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
CAV1-208ENST00000489856 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
CAV1-208ENST00000489856 RGPD3A6NKT7 1758 aaPredicted RBP12.82□□□□□ -0.36
CAV1-208ENST00000489856 RGPD4Q7Z3J3 1758 aa12.82□□□□□ -0.36
CAV1-208ENST00000489856 EZH2Q15910 746 aaKnown RBP12.82□□□□□ -0.36
CAV1-208ENST00000489856 AKAP4Q5JQC9 854 aa12.82□□□□□ -0.36
CAV1-208ENST00000489856 SYTL4Q96C24 671 aaPredicted RBP12.82□□□□□ -0.36
CAV1-208ENST00000489856 DCAF5Q96JK2 942 aa12.82□□□□□ -0.36
CAV1-208ENST00000489856 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
CAV1-208ENST00000489856 ANP32CO43423 234 aa12.81□□□□□ -0.36
CAV1-208ENST00000489856 PRKAR2BP31323 418 aa12.81□□□□□ -0.36
CAV1-208ENST00000489856 BTAF1O14981 1849 aa12.81□□□□□ -0.36
CAV1-208ENST00000489856 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
CAV1-208ENST00000489856 MTHFSDQ2M296 383 aaKnown RBP12.8□□□□□ -0.36
CAV1-208ENST00000489856 GAS2L2Q8NHY3 880 aa12.8□□□□□ -0.36
CAV1-208ENST00000489856 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
CAV1-208ENST00000489856 SPDYE16A6NNV3 312 aaPredicted RBP12.79□□□□□ -0.36
CAV1-208ENST00000489856 PDIA6Q15084 440 aa12.79□□□□□ -0.36
CAV1-208ENST00000489856 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
CAV1-208ENST00000489856 TOGARAM1Q9Y4F4 1720 aa12.79□□□□□ -0.36
CAV1-208ENST00000489856 ITGB4P16144 1822 aa12.78□□□□□ -0.36
CAV1-208ENST00000489856 RREB1Q92766 1687 aa12.78□□□□□ -0.36
CAV1-208ENST00000489856 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
CAV1-208ENST00000489856 ARSIQ5FYB1 569 aa12.78□□□□□ -0.36
CAV1-208ENST00000489856 PIGBQ92521 554 aa12.78□□□□□ -0.36
CAV1-208ENST00000489856 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
CAV1-208ENST00000489856 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
CAV1-208ENST00000489856 EVI5O60447 810 aa12.77□□□□□ -0.37
CAV1-208ENST00000489856 NEFMP07197 916 aa12.77□□□□□ -0.37
CAV1-208ENST00000489856 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.37
CAV1-208ENST00000489856 KDM6AO15550 1401 aaPredicted RBP12.77□□□□□ -0.37
CAV1-208ENST00000489856 GNAT3A8MTJ3 354 aa12.76□□□□□ -0.37
CAV1-208ENST00000489856 RNMTO43148 476 aaKnown RBP12.76□□□□□ -0.37
CAV1-208ENST00000489856 CABP4P57796 275 aa12.76□□□□□ -0.37
CAV1-208ENST00000489856 WDR43Q15061 677 aaKnown RBP eCLIP12.76□□□□□ -0.37
CAV1-208ENST00000489856 SLC27A3Q5K4L6 730 aa12.76□□□□□ -0.37
CAV1-208ENST00000489856 NBPF14Q5TI25 921 aa12.76□□□□□ -0.37
CAV1-208ENST00000489856 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
CAV1-208ENST00000489856 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
CAV1-208ENST00000489856 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
CAV1-208ENST00000489856 HMGB2P26583 209 aaKnown RBP12.75□□□□□ -0.37
CAV1-208ENST00000489856 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
CAV1-208ENST00000489856 MAP3K5Q99683 1374 aa12.75□□□□□ -0.37
CAV1-208ENST00000489856 LGR6Q9HBX8 967 aa12.75□□□□□ -0.37
CAV1-208ENST00000489856 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
CAV1-208ENST00000489856 SEMA3EO15041 775 aa12.74□□□□□ -0.37
CAV1-208ENST00000489856 HTATSF1O43719 755 aaKnown RBP12.74□□□□□ -0.37
CAV1-208ENST00000489856 NFATC2IPQ8NCF5 419 aa12.74□□□□□ -0.37
CAV1-208ENST00000489856 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
CAV1-208ENST00000489856 LY75O60449 1722 aa12.74□□□□□ -0.37
CAV1-208ENST00000489856 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
CAV1-208ENST00000489856 PALLDQ8WX93 1383 aa12.73□□□□□ -0.37
CAV1-208ENST00000489856 MAPK8IP3Q9UPT6 1336 aa12.73□□□□□ -0.37
CAV1-208ENST00000489856 NUDT7P0C024 238 aa12.73□□□□□ -0.37
CAV1-208ENST00000489856 ATG3Q9NT62 314 aa12.73□□□□□ -0.37
CAV1-208ENST00000489856 ASAP1Q9ULH1 1129 aa12.73□□□□□ -0.37
CAV1-208ENST00000489856 ADAMTS8Q9UP79 889 aa12.73□□□□□ -0.37
CAV1-208ENST00000489856 VIRMAQ69YN4 1812 aaKnown RBP12.72□□□□□ -0.37
CAV1-208ENST00000489856 HOXB1P14653 301 aaPredicted RBP12.72□□□□□ -0.37
CAV1-208ENST00000489856 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
CAV1-208ENST00000489856 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
CAV1-208ENST00000489856 RTF1Q92541 710 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms