RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 CHRNA5P30532 468 aa14.06□□□□□ -0.16
CHKB-211ENST00000489453 SLC39A6Q13433 755 aa14.06□□□□□ -0.16
CHKB-211ENST00000489453 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
CHKB-211ENST00000489453 LGR6Q9HBX8 967 aa14.06□□□□□ -0.16
CHKB-211ENST00000489453 SOS1Q07889 1333 aaPredicted RBP14.06□□□□□ -0.16
CHKB-211ENST00000489453 COL15A1P39059 1388 aa14.06□□□□□ -0.16
CHKB-211ENST00000489453 KCPQ6ZWJ8 1503 aa14.05□□□□□ -0.16
CHKB-211ENST00000489453 DIAPH1O60610 1272 aaKnown RBP14.05□□□□□ -0.16
CHKB-211ENST00000489453 CYP19A1P11511 503 aaPredicted RBP14.05□□□□□ -0.16
CHKB-211ENST00000489453 RBM46Q8TBY0 533 aaKnown RBP14.05□□□□□ -0.16
CHKB-211ENST00000489453 TIAM2Q8IVF5 1701 aa14.04□□□□□ -0.16
CHKB-211ENST00000489453 NRXN2Q9P2S2 1712 aa14.04□□□□□ -0.16
CHKB-211ENST00000489453 TM4SF1P30408 202 aa14.04□□□□□ -0.16
CHKB-211ENST00000489453 TTC5Q8N0Z6 440 aa14.04□□□□□ -0.16
CHKB-211ENST00000489453 KIF7Q2M1P5 1343 aa14.04□□□□□ -0.16
CHKB-211ENST00000489453 MTHFSDQ2M296 383 aaKnown RBP14.03□□□□□ -0.16
CHKB-211ENST00000489453 CC2D1BQ5T0F9 858 aaKnown RBP14.03□□□□□ -0.16
CHKB-211ENST00000489453 NARFQ9UHQ1 456 aa14.03□□□□□ -0.16
CHKB-211ENST00000489453 CACNA1SQ13698 1873 aa14.03□□□□□ -0.16
CHKB-211ENST00000489453 STARD3NLO95772 234 aa14.02□□□□□ -0.17
CHKB-211ENST00000489453 NFIXQ14938 502 aa14.02□□□□□ -0.17
CHKB-211ENST00000489453 ZBTB1Q9Y2K1 713 aa14.02□□□□□ -0.17
CHKB-211ENST00000489453 SIPA1L3O60292 1781 aaPredicted RBP14.01□□□□□ -0.17
CHKB-211ENST00000489453 A0A087WZG4 1122 aa14.01□□□□□ -0.17
CHKB-211ENST00000489453 SERPINB2P05120 415 aa14.01□□□□□ -0.17
CHKB-211ENST00000489453 CANXP27824 592 aaKnown RBP14.01□□□□□ -0.17
CHKB-211ENST00000489453 FSTL1Q12841 308 aa14.01□□□□□ -0.17
CHKB-211ENST00000489453 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
CHKB-211ENST00000489453 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
CHKB-211ENST00000489453 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
CHKB-211ENST00000489453 SCN7AQ01118 1682 aa14.01□□□□□ -0.17
CHKB-211ENST00000489453 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
CHKB-211ENST00000489453 RASSF7Q02833 373 aa14□□□□□ -0.17
CHKB-211ENST00000489453 TEFQ10587 303 aa14□□□□□ -0.17
CHKB-211ENST00000489453 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
CHKB-211ENST00000489453 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
CHKB-211ENST00000489453 C2CD5Q86YS7 1000 aa14□□□□□ -0.17
CHKB-211ENST00000489453 ZNF330Q9Y3S2 320 aaPredicted RBP14□□□□□ -0.17
CHKB-211ENST00000489453 DICER1Q9UPY3 1922 aaKnown RBP14□□□□□ -0.17
CHKB-211ENST00000489453 ANKRD31Q8N7Z5 1873 aa13.99□□□□□ -0.17
CHKB-211ENST00000489453 ZC3H4Q9UPT8 1303 aaKnown RBP13.99□□□□□ -0.17
CHKB-211ENST00000489453 H0YIN7 160 aa13.99□□□□□ -0.17
CHKB-211ENST00000489453 LMNB1P20700 586 aa13.99□□□□□ -0.17
CHKB-211ENST00000489453 TTLL6Q8N841 843 aa13.99□□□□□ -0.17
CHKB-211ENST00000489453 GAS2L2Q8NHY3 880 aa13.99□□□□□ -0.17
CHKB-211ENST00000489453 GNAT3A8MTJ3 354 aa13.98□□□□□ -0.17
CHKB-211ENST00000489453 NPHP1O15259 732 aa13.98□□□□□ -0.17
CHKB-211ENST00000489453 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
CHKB-211ENST00000489453 TEX13AQ9BXU3 409 aaPredicted RBP13.97□□□□□ -0.17
CHKB-211ENST00000489453 COL11A2P13942 1736 aaPredicted RBP13.97□□□□□ -0.17
CHKB-211ENST00000489453 FER1L6Q2WGJ9 1857 aa13.96□□□□□ -0.17
CHKB-211ENST00000489453 COL3A1P02461 1466 aaPredicted RBP13.96□□□□□ -0.17
CHKB-211ENST00000489453 DNAJC5GQ8N7S2 189 aa13.96□□□□□ -0.17
CHKB-211ENST00000489453 ZNF622Q969S3 477 aaKnown RBP eCLIP13.96□□□□□ -0.17
CHKB-211ENST00000489453 BCL2L12Q9HB09 334 aa13.96□□□□□ -0.17
CHKB-211ENST00000489453 BCORQ6W2J9 1755 aa13.96□□□□□ -0.18
CHKB-211ENST00000489453 CARMIL3Q8ND23 1372 aa13.96□□□□□ -0.18
CHKB-211ENST00000489453 HEG1Q9ULI3 1381 aa13.96□□□□□ -0.18
CHKB-211ENST00000489453 PDE6BP35913 854 aa13.95□□□□□ -0.18
CHKB-211ENST00000489453 EIF5P55010 431 aaKnown RBP13.95□□□□□ -0.18
CHKB-211ENST00000489453 HTRA3P83110 453 aa13.95□□□□□ -0.18
CHKB-211ENST00000489453 ZNF790Q6PG37 636 aa13.95□□□□□ -0.18
CHKB-211ENST00000489453 KLRG1Q96E93 195 aa13.95□□□□□ -0.18
CHKB-211ENST00000489453 ZNF496Q96IT1 587 aaPredicted RBP13.95□□□□□ -0.18
CHKB-211ENST00000489453 PDZRN3Q9UPQ7 1066 aa13.95□□□□□ -0.18
CHKB-211ENST00000489453 ARFGEF2Q9Y6D5 1785 aa13.94□□□□□ -0.18
CHKB-211ENST00000489453 PER1O15534 1290 aaPredicted RBP13.94□□□□□ -0.18
CHKB-211ENST00000489453 TBC1D9BQ66K14 1250 aa13.94□□□□□ -0.18
CHKB-211ENST00000489453 CFAP53Q96M91 514 aa13.94□□□□□ -0.18
CHKB-211ENST00000489453 FMNL2Q96PY5 1086 aa13.94□□□□□ -0.18
CHKB-211ENST00000489453 TBC1D2BQ9UPU7 963 aa13.94□□□□□ -0.18
CHKB-211ENST00000489453 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
CHKB-211ENST00000489453 GLTPD2A6NH11 291 aa13.93□□□□□ -0.18
CHKB-211ENST00000489453 VEGFAP15692 232 aaPredicted RBP13.93□□□□□ -0.18
CHKB-211ENST00000489453 ZNF219Q9P2Y4 722 aaPredicted RBP13.93□□□□□ -0.18
CHKB-211ENST00000489453 IL6STP40189 918 aaPredicted RBP13.92□□□□□ -0.18
CHKB-211ENST00000489453 ST5P78524 1137 aa13.92□□□□□ -0.18
CHKB-211ENST00000489453 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
CHKB-211ENST00000489453 CNBD1Q8NA66 436 aa13.92□□□□□ -0.18
CHKB-211ENST00000489453 IL17REQ8NFR9 667 aa13.92□□□□□ -0.18
CHKB-211ENST00000489453 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
CHKB-211ENST00000489453 BRIP1Q9BX63 1249 aa13.92□□□□□ -0.18
CHKB-211ENST00000489453 SLX4Q8IY92 1834 aa13.92□□□□□ -0.18
CHKB-211ENST00000489453 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
CHKB-211ENST00000489453 C21orf2O43822 256 aa13.91□□□□□ -0.18
CHKB-211ENST00000489453 PRR5LQ6MZQ0 368 aa13.91□□□□□ -0.18
CHKB-211ENST00000489453 CCDC24Q8N4L8 307 aa13.91□□□□□ -0.18
CHKB-211ENST00000489453 NUDCQ9Y266 331 aa13.91□□□□□ -0.18
CHKB-211ENST00000489453 NFKBIEO00221 500 aa13.9□□□□□ -0.18
CHKB-211ENST00000489453 PRKAR2BP31323 418 aa13.9□□□□□ -0.18
CHKB-211ENST00000489453 ERFEQ4G0M1 354 aa13.9□□□□□ -0.18
CHKB-211ENST00000489453 RTF1Q92541 710 aaKnown RBP13.9□□□□□ -0.18
CHKB-211ENST00000489453 A1BGP04217 495 aa13.89□□□□□ -0.19
CHKB-211ENST00000489453 PRELPP51888 382 aa13.89□□□□□ -0.19
CHKB-211ENST00000489453 DZIP3Q86Y13 1208 aaKnown RBP13.89□□□□□ -0.19
CHKB-211ENST00000489453 CNKSR1Q969H4 720 aa13.89□□□□□ -0.19
CHKB-211ENST00000489453 TAOK3Q9H2K8 898 aa13.89□□□□□ -0.19
CHKB-211ENST00000489453 CEMIPQ8WUJ3 1361 aa13.88□□□□□ -0.19
CHKB-211ENST00000489453 SOGA3Q5TF21 947 aa13.88□□□□□ -0.19
CHKB-211ENST00000489453 JMYQ8N9B5 988 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms