RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
SRRM1-216ENST00000489130 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
SRRM1-216ENST00000489130 HTATSF1O43719 755 aaKnown RBP16.72■□□□□ 0.27
SRRM1-216ENST00000489130 ZPR1O75312 459 aa16.72■□□□□ 0.27
SRRM1-216ENST00000489130 DDR1Q08345 913 aa16.72■□□□□ 0.27
SRRM1-216ENST00000489130 FMNL2Q96PY5 1086 aa16.72■□□□□ 0.27
SRRM1-216ENST00000489130 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
SRRM1-216ENST00000489130 NARFQ9UHQ1 456 aa16.72■□□□□ 0.27
SRRM1-216ENST00000489130 TM4SF1P30408 202 aa16.71■□□□□ 0.27
SRRM1-216ENST00000489130 RALBP1Q15311 655 aa16.71■□□□□ 0.27
SRRM1-216ENST00000489130 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
SRRM1-216ENST00000489130 MCM10Q7L590 875 aa16.71■□□□□ 0.27
SRRM1-216ENST00000489130 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
SRRM1-216ENST00000489130 KCNQ3O43525 872 aa16.7■□□□□ 0.26
SRRM1-216ENST00000489130 CANXP27824 592 aaKnown RBP16.7■□□□□ 0.26
SRRM1-216ENST00000489130 EIF5P55010 431 aaKnown RBP16.7■□□□□ 0.26
SRRM1-216ENST00000489130 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
SRRM1-216ENST00000489130 WWC3Q9ULE0 1092 aa16.7■□□□□ 0.26
SRRM1-216ENST00000489130 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
SRRM1-216ENST00000489130 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
SRRM1-216ENST00000489130 A0A0G2JLW4 131 aa16.68■□□□□ 0.26
SRRM1-216ENST00000489130 NEFMP07197 916 aa16.68■□□□□ 0.26
SRRM1-216ENST00000489130 DDX10Q13206 875 aaKnown RBP16.68■□□□□ 0.26
SRRM1-216ENST00000489130 DCTN1Q14203 1278 aa16.68■□□□□ 0.26
SRRM1-216ENST00000489130 A0A087WZG4 1122 aa16.67■□□□□ 0.26
SRRM1-216ENST00000489130 DPEP1P16444 411 aa16.67■□□□□ 0.26
SRRM1-216ENST00000489130 IL6STP40189 918 aaPredicted RBP16.67■□□□□ 0.26
SRRM1-216ENST00000489130 NFIXQ14938 502 aa16.67■□□□□ 0.26
SRRM1-216ENST00000489130 ADCY9O60503 1353 aa16.66■□□□□ 0.26
SRRM1-216ENST00000489130 KCNA3P22001 575 aa16.66■□□□□ 0.26
SRRM1-216ENST00000489130 PNNQ9H307 717 aaKnown RBP16.66■□□□□ 0.26
SRRM1-216ENST00000489130 NRXN2Q9P2S2 1712 aa16.66■□□□□ 0.26
SRRM1-216ENST00000489130 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
SRRM1-216ENST00000489130 BRCA1P38398 1863 aaKnown RBP16.65■□□□□ 0.26
SRRM1-216ENST00000489130 A1BGP04217 495 aa16.65■□□□□ 0.26
SRRM1-216ENST00000489130 TAF7Q15545 349 aaPredicted RBP16.65■□□□□ 0.26
SRRM1-216ENST00000489130 NFE2L2Q16236 605 aa16.65■□□□□ 0.26
SRRM1-216ENST00000489130 BCS1LQ9Y276 419 aa16.65■□□□□ 0.26
SRRM1-216ENST00000489130 SNRPA1P09661 255 aaKnown RBP16.64■□□□□ 0.25
SRRM1-216ENST00000489130 USP16Q9Y5T5 823 aa16.64■□□□□ 0.25
SRRM1-216ENST00000489130 MYBBP1AQ9BQG0 1328 aaKnown RBP16.64■□□□□ 0.25
SRRM1-216ENST00000489130 ATP10DQ9P241 1426 aa16.63■□□□□ 0.25
SRRM1-216ENST00000489130 MAPK8IP3Q9UPT6 1336 aa16.63■□□□□ 0.25
SRRM1-216ENST00000489130 DLG5Q8TDM6 1919 aa16.62■□□□□ 0.25
SRRM1-216ENST00000489130 AFDNP55196 1824 aaKnown RBP16.62■□□□□ 0.25
SRRM1-216ENST00000489130 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
SRRM1-216ENST00000489130 SERPINB2P05120 415 aa16.62■□□□□ 0.25
SRRM1-216ENST00000489130 PIM2Q9P1W9 311 aa16.62■□□□□ 0.25
SRRM1-216ENST00000489130 ZNF330Q9Y3S2 320 aaPredicted RBP16.62■□□□□ 0.25
SRRM1-216ENST00000489130 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
SRRM1-216ENST00000489130 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
SRRM1-216ENST00000489130 KDM3BQ7LBC6 1761 aa16.6■□□□□ 0.25
SRRM1-216ENST00000489130 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
SRRM1-216ENST00000489130 CHRNA5P30532 468 aa16.6■□□□□ 0.25
SRRM1-216ENST00000489130 TBC1D9BQ66K14 1250 aa16.6■□□□□ 0.25
SRRM1-216ENST00000489130 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
SRRM1-216ENST00000489130 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
SRRM1-216ENST00000489130 BCORQ6W2J9 1755 aa16.59■□□□□ 0.25
SRRM1-216ENST00000489130 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
SRRM1-216ENST00000489130 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
SRRM1-216ENST00000489130 DALRD3Q5D0E6 543 aaKnown RBP16.59■□□□□ 0.25
SRRM1-216ENST00000489130 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
SRRM1-216ENST00000489130 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
SRRM1-216ENST00000489130 C1QTNF8P60827 252 aa16.58■□□□□ 0.24
SRRM1-216ENST00000489130 BICDL1Q6ZP65 573 aa16.58■□□□□ 0.24
SRRM1-216ENST00000489130 DZIP3Q86Y13 1208 aaKnown RBP16.58■□□□□ 0.24
SRRM1-216ENST00000489130 THUMPD2Q9BTF0 503 aaKnown RBP16.58■□□□□ 0.24
SRRM1-216ENST00000489130 LAMB4A4D0S4 1761 aa16.58■□□□□ 0.24
SRRM1-216ENST00000489130 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
SRRM1-216ENST00000489130 NBPF10Q6P3W6 841 aaKnown RBP16.57■□□□□ 0.24
SRRM1-216ENST00000489130 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
SRRM1-216ENST00000489130 NBPF15Q8N660 670 aa16.57■□□□□ 0.24
SRRM1-216ENST00000489130 RGL2O15211 777 aa16.56■□□□□ 0.24
SRRM1-216ENST00000489130 EIF4A1P60842 406 aaKnown RBP16.56■□□□□ 0.24
SRRM1-216ENST00000489130 SETDB2Q96T68 719 aa16.56■□□□□ 0.24
SRRM1-216ENST00000489130 GPBP1L1Q9HC44 474 aaPredicted RBP16.56■□□□□ 0.24
SRRM1-216ENST00000489130 DLEC1Q9Y238 1755 aa16.56■□□□□ 0.24
SRRM1-216ENST00000489130 TMPOP42166 694 aaKnown RBP16.55■□□□□ 0.24
SRRM1-216ENST00000489130 RIPK4P57078 832 aa16.55■□□□□ 0.24
SRRM1-216ENST00000489130 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
SRRM1-216ENST00000489130 CLEC4GQ6UXB4 293 aa16.55■□□□□ 0.24
SRRM1-216ENST00000489130 PRKRIP1Q9H875 184 aaPredicted RBP16.55■□□□□ 0.24
SRRM1-216ENST00000489130 C2CD5Q86YS7 1000 aa16.54■□□□□ 0.24
SRRM1-216ENST00000489130 BRIP1Q9BX63 1249 aa16.54■□□□□ 0.24
SRRM1-216ENST00000489130 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
SRRM1-216ENST00000489130 H0YIN7 160 aa16.53■□□□□ 0.24
SRRM1-216ENST00000489130 LMOD3Q0VAK6 560 aa16.53■□□□□ 0.24
SRRM1-216ENST00000489130 CNBD1Q8NA66 436 aa16.53■□□□□ 0.24
SRRM1-216ENST00000489130 PDZRN3Q9UPQ7 1066 aa16.53■□□□□ 0.24
SRRM1-216ENST00000489130 ANKRD31Q8N7Z5 1873 aa16.52■□□□□ 0.24
SRRM1-216ENST00000489130 PDE6BP35913 854 aa16.52■□□□□ 0.24
SRRM1-216ENST00000489130 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.24
SRRM1-216ENST00000489130 TTLL6Q8N841 843 aa16.52■□□□□ 0.24
SRRM1-216ENST00000489130 ZNF526Q8TF50 670 aaPredicted RBP16.52■□□□□ 0.24
SRRM1-216ENST00000489130 BABAM1Q9NWV8 329 aa16.52■□□□□ 0.24
SRRM1-216ENST00000489130 TSPYL4Q9UJ04 414 aa16.52■□□□□ 0.24
SRRM1-216ENST00000489130 ZEB1P37275 1124 aaPredicted RBP16.51■□□□□ 0.23
SRRM1-216ENST00000489130 C9orf131Q5VYM1 1079 aa16.51■□□□□ 0.23
SRRM1-216ENST00000489130 CCDC146Q8IYE0 955 aa16.51■□□□□ 0.23
SRRM1-216ENST00000489130 RUNDC1Q96C34 613 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms