RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ABCC5O15440 1437 aa12.04□□□□□ -0.48
TRAPPC12-221ENST00000489032 ZC3H13Q5T200 1668 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-221ENST00000489032 VASH1Q7L8A9 365 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC12-221ENST00000489032 TRMT44Q8IYL2 757 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-221ENST00000489032 C1QTNF2Q9BXJ5 285 aa12.04□□□□□ -0.48
TRAPPC12-221ENST00000489032 TFIP11Q9UBB9 837 aaKnown RBP12.04□□□□□ -0.48
TRAPPC12-221ENST00000489032 MAST1Q9Y2H9 1570 aa12.04□□□□□ -0.48
TRAPPC12-221ENST00000489032 ROBO1Q9Y6N7 1651 aa12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 KIF3BO15066 747 aa12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 SKIP12755 728 aa12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 RFX1P22670 979 aa12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 ZNF697Q5TEC3 545 aa12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 ZNF598Q86UK7 904 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 TRIM52Q96A61 297 aa12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 V9GY48 417 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 DHX29Q7Z478 1369 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
TRAPPC12-221ENST00000489032 LMOD1P29536 600 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC12-221ENST00000489032 ITGAEP38570 1179 aa12.02□□□□□ -0.49
TRAPPC12-221ENST00000489032 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
TRAPPC12-221ENST00000489032 ANKRD30AQ9BXX3 1397 aa12.02□□□□□ -0.49
TRAPPC12-221ENST00000489032 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
TRAPPC12-221ENST00000489032 WNT7AO00755 349 aa12.01□□□□□ -0.49
TRAPPC12-221ENST00000489032 ATP9BO43861 1147 aa12.01□□□□□ -0.49
TRAPPC12-221ENST00000489032 ZNF772Q68DY9 489 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-221ENST00000489032 NFATC2IPQ8NCF5 419 aa12.01□□□□□ -0.49
TRAPPC12-221ENST00000489032 EMID1Q96A84 441 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-221ENST00000489032 JCADQ9P266 1359 aa12.01□□□□□ -0.49
TRAPPC12-221ENST00000489032 SRCAPQ6ZRS2 3230 aa12□□□□□ -0.49
TRAPPC12-221ENST00000489032 FOXC1Q12948 553 aa12□□□□□ -0.49
TRAPPC12-221ENST00000489032 TBC1D9Q6ZT07 1266 aa12□□□□□ -0.49
TRAPPC12-221ENST00000489032 ARXQ96QS3 562 aa12□□□□□ -0.49
TRAPPC12-221ENST00000489032 UCN2Q96RP3 112 aa12□□□□□ -0.49
TRAPPC12-221ENST00000489032 KCTD15Q96SI1 283 aaPredicted RBP12□□□□□ -0.49
TRAPPC12-221ENST00000489032 GIGYF1O75420 1035 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC12-221ENST00000489032 CCDC125Q86Z20 511 aa11.99□□□□□ -0.49
TRAPPC12-221ENST00000489032 RRP7BPQ9NSQ0 103 aa11.99□□□□□ -0.49
TRAPPC12-221ENST00000489032 ACIN1Q9UKV3 1341 aaKnown RBP11.99□□□□□ -0.49
TRAPPC12-221ENST00000489032 KIF15Q9NS87 1388 aa11.99□□□□□ -0.49
TRAPPC12-221ENST00000489032 SCAF11Q99590 1463 aaKnown RBP11.99□□□□□ -0.49
TRAPPC12-221ENST00000489032 PHLPP1O60346 1717 aa11.98□□□□□ -0.49
TRAPPC12-221ENST00000489032 PIK3CDO00329 1044 aa11.98□□□□□ -0.49
TRAPPC12-221ENST00000489032 RAB15P59190 212 aa11.98□□□□□ -0.49
TRAPPC12-221ENST00000489032 MEX3CQ5U5Q3 659 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-221ENST00000489032 SEPT12Q8IYM1 358 aa11.98□□□□□ -0.49
TRAPPC12-221ENST00000489032 MRGPRX2Q96LB1 330 aa11.98□□□□□ -0.49
TRAPPC12-221ENST00000489032 MAP4K5Q9Y4K4 846 aa11.98□□□□□ -0.49
TRAPPC12-221ENST00000489032 DUOX2Q9NRD8 1548 aa11.97□□□□□ -0.49
TRAPPC12-221ENST00000489032 TMEM94Q12767 1356 aa11.97□□□□□ -0.49
TRAPPC12-221ENST00000489032 MAP7D1Q3KQU3 841 aa11.97□□□□□ -0.49
TRAPPC12-221ENST00000489032 HOMEZQ8IX15 550 aa11.97□□□□□ -0.49
TRAPPC12-221ENST00000489032 ADGRL2O95490 1459 aa11.96□□□□□ -0.49
TRAPPC12-221ENST00000489032 LZTS3O60299 673 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-221ENST00000489032 RXRBP28702 533 aa11.96□□□□□ -0.49
TRAPPC12-221ENST00000489032 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.49
TRAPPC12-221ENST00000489032 PLPP7Q8NBV4 271 aa11.96□□□□□ -0.49
TRAPPC12-221ENST00000489032 DOLKQ9UPQ8 538 aa11.96□□□□□ -0.49
TRAPPC12-221ENST00000489032 MAFBQ9Y5Q3 323 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-221ENST00000489032 ROCK1Q13464 1354 aa11.95□□□□□ -0.5
TRAPPC12-221ENST00000489032 PPP1R15AO75807 674 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-221ENST00000489032 CFAP70Q5T0N1 1121 aa11.95□□□□□ -0.5
TRAPPC12-221ENST00000489032 MPNDQ8N594 471 aa11.95□□□□□ -0.5
TRAPPC12-221ENST00000489032 CDK15Q96Q40 435 aa11.95□□□□□ -0.5
TRAPPC12-221ENST00000489032 TLL2Q9Y6L7 1015 aa11.95□□□□□ -0.5
TRAPPC12-221ENST00000489032 UBR1Q8IWV7 1749 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 SPATA31A6Q5VVP1 1343 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 USP17L5A8MUK1 530 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 LTKP29376 864 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 EML3Q32P44 896 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 PHTF2Q8N3S3 785 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 PBXIP1Q96AQ6 731 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 EID1Q9Y6B2 187 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 WASF2Q9Y6W5 498 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 CDK12Q9NYV4 1490 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 ERBINQ96RT1 1412 aa11.94□□□□□ -0.5
TRAPPC12-221ENST00000489032 TTC24A2A3L6 582 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC12-221ENST00000489032 FSHRP23945 695 aa11.93□□□□□ -0.5
TRAPPC12-221ENST00000489032 DHX9Q08211 1270 aaKnown RBP11.93□□□□□ -0.5
TRAPPC12-221ENST00000489032 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
TRAPPC12-221ENST00000489032 VRTNQ9H8Y1 702 aa11.93□□□□□ -0.5
TRAPPC12-221ENST00000489032 SLIT1O75093 1534 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 ERVK-7P63135 1459 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 USP17L3A6NCW0 530 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 USP17L4A6NCW7 530 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 ESPNB1AK53 854 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 SIAH2O43255 324 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 OXLD1Q5BKU9 147 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 USP17L2Q6R6M4 530 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 USP17L1Q7RTZ2 530 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 CYP4X1Q8N118 509 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 DEPDC4Q8N2C3 294 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 PCDHB11Q9Y5F2 797 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 LRP6O75581 1613 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 EIF2AK4Q9P2K8 1649 aaKnown RBP11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 ANKRD50Q9ULJ7 1429 aa11.92□□□□□ -0.5
TRAPPC12-221ENST00000489032 ARHGAP23Q9P227 1491 aa11.91□□□□□ -0.5
TRAPPC12-221ENST00000489032 ADH1CP00326 375 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms