RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CHMP4AQ9BY43 222 aa13.87□□□□□ -0.19
COL21A1-211ENST00000488912 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
COL21A1-211ENST00000488912 ANXA1P04083 346 aa13.87□□□□□ -0.19
COL21A1-211ENST00000488912 SYTL4Q96C24 671 aaPredicted RBP13.87□□□□□ -0.19
COL21A1-211ENST00000488912 PHAXQ9H814 394 aaKnown RBP13.87□□□□□ -0.19
COL21A1-211ENST00000488912 N4BP2Q86UW6 1770 aaPredicted RBP13.87□□□□□ -0.19
COL21A1-211ENST00000488912 FKBP5Q13451 457 aaPredicted RBP13.86□□□□□ -0.19
COL21A1-211ENST00000488912 PROSER3Q2NL68 480 aa13.86□□□□□ -0.19
COL21A1-211ENST00000488912 DBF4Q9UBU7 674 aaPredicted RBP13.86□□□□□ -0.19
COL21A1-211ENST00000488912 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
COL21A1-211ENST00000488912 PTCD1O75127 700 aaKnown RBP13.86□□□□□ -0.19
COL21A1-211ENST00000488912 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
COL21A1-211ENST00000488912 USP16Q9Y5T5 823 aa13.86□□□□□ -0.19
COL21A1-211ENST00000488912 F6X3S4 739 aa13.85□□□□□ -0.19
COL21A1-211ENST00000488912 PRIM1P49642 420 aaKnown RBP13.85□□□□□ -0.19
COL21A1-211ENST00000488912 ATG3Q9NT62 314 aa13.85□□□□□ -0.19
COL21A1-211ENST00000488912 AAMPQ13685 434 aa13.85□□□□□ -0.19
COL21A1-211ENST00000488912 ACSBG1Q96GR2 724 aa13.85□□□□□ -0.19
COL21A1-211ENST00000488912 RBM19Q9Y4C8 960 aaKnown RBP13.85□□□□□ -0.19
COL21A1-211ENST00000488912 PDIA6Q15084 440 aa13.84□□□□□ -0.19
COL21A1-211ENST00000488912 INTS3Q68E01 1043 aaKnown RBP13.84□□□□□ -0.19
COL21A1-211ENST00000488912 DDX21Q9NR30 783 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL21A1-211ENST00000488912 SLC4A10Q6U841 1118 aa13.83□□□□□ -0.2
COL21A1-211ENST00000488912 QTRT2Q9H974 415 aaKnown RBP13.83□□□□□ -0.2
COL21A1-211ENST00000488912 ZBTB40Q9NUA8 1239 aa13.83□□□□□ -0.2
COL21A1-211ENST00000488912 PCDHB15Q9Y5E8 787 aa13.83□□□□□ -0.2
COL21A1-211ENST00000488912 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
COL21A1-211ENST00000488912 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
COL21A1-211ENST00000488912 HYPKQ9NX55 129 aa13.82□□□□□ -0.2
COL21A1-211ENST00000488912 KDM2BQ8NHM5 1336 aa13.82□□□□□ -0.2
COL21A1-211ENST00000488912 ONECUT3O60422 494 aaPredicted RBP13.81□□□□□ -0.2
COL21A1-211ENST00000488912 MYL6BP14649 208 aa13.81□□□□□ -0.2
COL21A1-211ENST00000488912 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
COL21A1-211ENST00000488912 ADCY9O60503 1353 aa13.81□□□□□ -0.2
COL21A1-211ENST00000488912 TJP1Q07157 1748 aa13.81□□□□□ -0.2
COL21A1-211ENST00000488912 KCNQ2O43526 872 aa13.8□□□□□ -0.2
COL21A1-211ENST00000488912 CCT4P50991 539 aaKnown RBP13.8□□□□□ -0.2
COL21A1-211ENST00000488912 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
COL21A1-211ENST00000488912 BRWD3Q6RI45 1802 aa13.8□□□□□ -0.2
COL21A1-211ENST00000488912 PI4KAP2A4QPH2 592 aa13.8□□□□□ -0.2
COL21A1-211ENST00000488912 LRP10Q7Z4F1 713 aa13.8□□□□□ -0.2
COL21A1-211ENST00000488912 SEPT12Q8IYM1 358 aa13.8□□□□□ -0.2
COL21A1-211ENST00000488912 PI4KAP1Q8N8J0 262 aa13.8□□□□□ -0.2
COL21A1-211ENST00000488912 SBF2Q86WG5 1849 aa13.8□□□□□ -0.2
COL21A1-211ENST00000488912 IGHDP01880 384 aa13.79□□□□□ -0.2
COL21A1-211ENST00000488912 FAM182BQ5T319 152 aa13.79□□□□□ -0.2
COL21A1-211ENST00000488912 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
COL21A1-211ENST00000488912 FBXO41Q8TF61 875 aa13.79□□□□□ -0.2
COL21A1-211ENST00000488912 SLC4A9Q96Q91 983 aa13.79□□□□□ -0.2
COL21A1-211ENST00000488912 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
COL21A1-211ENST00000488912 AIMP1Q12904 312 aaKnown RBP13.79□□□□□ -0.2
COL21A1-211ENST00000488912 CENPQQ7L2Z9 268 aaPredicted RBP13.79□□□□□ -0.2
COL21A1-211ENST00000488912 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
COL21A1-211ENST00000488912 C1orf115Q9H7X2 142 aa13.79□□□□□ -0.2
COL21A1-211ENST00000488912 BTAF1O14981 1849 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 NBPF14Q5TI25 921 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 NBPF10Q6P3W6 841 aaKnown RBP13.78□□□□□ -0.2
COL21A1-211ENST00000488912 DNAJC10Q8IXB1 793 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 NBPF15Q8N660 670 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 XAGE3Q8WTP9 111 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 DNAAF4Q8WXU2 420 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 A1BGP04217 495 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 MEIS3Q99687 375 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 ARFGEF2Q9Y6D5 1785 aa13.78□□□□□ -0.2
COL21A1-211ENST00000488912 EP400Q96L91 3159 aa13.77□□□□□ -0.21
COL21A1-211ENST00000488912 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
COL21A1-211ENST00000488912 COPS6Q7L5N1 327 aa13.77□□□□□ -0.21
COL21A1-211ENST00000488912 MAP3K2Q9Y2U5 619 aa13.77□□□□□ -0.21
COL21A1-211ENST00000488912 ZNF772Q68DY9 489 aaPredicted RBP13.76□□□□□ -0.21
COL21A1-211ENST00000488912 TEX13AQ9BXU3 409 aaPredicted RBP13.76□□□□□ -0.21
COL21A1-211ENST00000488912 ATP10DQ9P241 1426 aa13.76□□□□□ -0.21
COL21A1-211ENST00000488912 PALLDQ8WX93 1383 aa13.76□□□□□ -0.21
COL21A1-211ENST00000488912 CICQ96RK0 1608 aaPredicted RBP13.76□□□□□ -0.21
COL21A1-211ENST00000488912 MSH5O43196 834 aa13.76□□□□□ -0.21
COL21A1-211ENST00000488912 DDX58O95786 925 aaKnown RBP13.76□□□□□ -0.21
COL21A1-211ENST00000488912 PTF1AQ7RTS3 328 aa13.76□□□□□ -0.21
COL21A1-211ENST00000488912 NUP188Q5SRE5 1749 aa13.76□□□□□ -0.21
COL21A1-211ENST00000488912 BEND3Q5T5X7 828 aa13.75□□□□□ -0.21
COL21A1-211ENST00000488912 SRCIN1Q9C0H9 1055 aa13.75□□□□□ -0.21
COL21A1-211ENST00000488912 STARD3NLO95772 234 aa13.74□□□□□ -0.21
COL21A1-211ENST00000488912 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
COL21A1-211ENST00000488912 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
COL21A1-211ENST00000488912 CYP19A1P11511 503 aaPredicted RBP13.74□□□□□ -0.21
COL21A1-211ENST00000488912 SIK1P57059 783 aa13.74□□□□□ -0.21
COL21A1-211ENST00000488912 HDAC1Q13547 482 aaPredicted RBP13.74□□□□□ -0.21
COL21A1-211ENST00000488912 RIC3Q7Z5B4 369 aa13.74□□□□□ -0.21
COL21A1-211ENST00000488912 COL5A3P25940 1745 aaPredicted RBP13.74□□□□□ -0.21
COL21A1-211ENST00000488912 AFDNP55196 1824 aaKnown RBP13.73□□□□□ -0.21
COL21A1-211ENST00000488912 ZNF831Q5JPB2 1677 aa13.73□□□□□ -0.21
COL21A1-211ENST00000488912 ANKRD13DQ6ZTN6 518 aa13.73□□□□□ -0.21
COL21A1-211ENST00000488912 SMARCC1Q92922 1105 aaPredicted RBP13.73□□□□□ -0.21
COL21A1-211ENST00000488912 RBM6P78332 1123 aaKnown RBP13.73□□□□□ -0.21
COL21A1-211ENST00000488912 SKAP1Q86WV1 359 aa13.73□□□□□ -0.21
COL21A1-211ENST00000488912 USP44Q9H0E7 712 aa13.73□□□□□ -0.21
COL21A1-211ENST00000488912 MYH14Q7Z406 1995 aaKnown RBP13.73□□□□□ -0.21
COL21A1-211ENST00000488912 ATP6V1AP38606 617 aa13.72□□□□□ -0.21
COL21A1-211ENST00000488912 CWF19L2Q2TBE0 894 aaKnown RBP13.72□□□□□ -0.21
COL21A1-211ENST00000488912 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms