RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 PPP2R1AP30153 589 aa24.53■■□□□ 1.52
ATG9A-222ENST00000488833 RSPH6AQ9H0K4 717 aa24.53■■□□□ 1.52
ATG9A-222ENST00000488833 GPBP1L1Q9HC44 474 aaPredicted RBP24.53■■□□□ 1.52
ATG9A-222ENST00000488833 NUDCQ9Y266 331 aa24.53■■□□□ 1.52
ATG9A-222ENST00000488833 ZNF526Q8TF50 670 aaPredicted RBP24.52■■□□□ 1.52
ATG9A-222ENST00000488833 POLRMTO00411 1230 aaKnown RBP24.51■■□□□ 1.51
ATG9A-222ENST00000488833 FCHSD2O94868 740 aa24.51■■□□□ 1.51
ATG9A-222ENST00000488833 PHACTR3Q96KR7 559 aa24.51■■□□□ 1.51
ATG9A-222ENST00000488833 ZNF790Q6PG37 636 aa24.5■■□□□ 1.51
ATG9A-222ENST00000488833 ZNF496Q96IT1 587 aaPredicted RBP24.5■■□□□ 1.51
ATG9A-222ENST00000488833 NARFQ9UHQ1 456 aa24.5■■□□□ 1.51
ATG9A-222ENST00000488833 ARFGEF1Q9Y6D6 1849 aa24.49■■□□□ 1.51
ATG9A-222ENST00000488833 STARD3NLO95772 234 aa24.49■■□□□ 1.51
ATG9A-222ENST00000488833 U2AF1L5P0DN76 240 aaPredicted RBP24.49■■□□□ 1.51
ATG9A-222ENST00000488833 CANXP27824 592 aaKnown RBP24.49■■□□□ 1.51
ATG9A-222ENST00000488833 TM4SF1P30408 202 aa24.49■■□□□ 1.51
ATG9A-222ENST00000488833 U2AF1Q01081 240 aaKnown RBP eCLIP24.49■■□□□ 1.51
ATG9A-222ENST00000488833 CEMIPQ8WUJ3 1361 aa24.49■■□□□ 1.51
ATG9A-222ENST00000488833 HEG1Q9ULI3 1381 aa24.49■■□□□ 1.51
ATG9A-222ENST00000488833 AFDNP55196 1824 aaKnown RBP24.47■■□□□ 1.51
ATG9A-222ENST00000488833 KCNA3P22001 575 aa24.47■■□□□ 1.51
ATG9A-222ENST00000488833 ARHGAP27Q6ZUM4 889 aa24.47■■□□□ 1.51
ATG9A-222ENST00000488833 NFIXQ14938 502 aa24.46■■□□□ 1.51
ATG9A-222ENST00000488833 PIM2Q9P1W9 311 aa24.46■■□□□ 1.51
ATG9A-222ENST00000488833 CHRNA5P30532 468 aa24.45■■□□□ 1.5
ATG9A-222ENST00000488833 FMNL2Q96PY5 1086 aa24.45■■□□□ 1.5
ATG9A-222ENST00000488833 BCL2L12Q9HB09 334 aa24.45■■□□□ 1.5
ATG9A-222ENST00000488833 NRXN2Q9P2S2 1712 aa24.44■■□□□ 1.5
ATG9A-222ENST00000488833 TEX13AQ9BXU3 409 aaPredicted RBP24.44■■□□□ 1.5
ATG9A-222ENST00000488833 SCN7AQ01118 1682 aa24.43■■□□□ 1.5
ATG9A-222ENST00000488833 A0A087WZG4 1122 aa24.43■■□□□ 1.5
ATG9A-222ENST00000488833 BTBD11A6QL63 1104 aa24.43■■□□□ 1.5
ATG9A-222ENST00000488833 EIF5P55010 431 aaKnown RBP24.43■■□□□ 1.5
ATG9A-222ENST00000488833 DALRD3Q5D0E6 543 aaKnown RBP24.43■■□□□ 1.5
ATG9A-222ENST00000488833 ZNF330Q9Y3S2 320 aaPredicted RBP24.43■■□□□ 1.5
ATG9A-222ENST00000488833 RTF1Q92541 710 aaKnown RBP24.42■■□□□ 1.5
ATG9A-222ENST00000488833 KCNQ3O43525 872 aa24.41■■□□□ 1.5
ATG9A-222ENST00000488833 SERPINB2P05120 415 aa24.4■■□□□ 1.5
ATG9A-222ENST00000488833 MCM10Q7L590 875 aa24.4■■□□□ 1.5
ATG9A-222ENST00000488833 BICDL1Q6ZP65 573 aa24.39■■□□□ 1.49
ATG9A-222ENST00000488833 DLEC1Q9Y238 1755 aa24.38■■□□□ 1.49
ATG9A-222ENST00000488833 A1BGP04217 495 aa24.37■■□□□ 1.49
ATG9A-222ENST00000488833 IL6STP40189 918 aaPredicted RBP24.37■■□□□ 1.49
ATG9A-222ENST00000488833 CARMIL3Q8ND23 1372 aa24.37■■□□□ 1.49
ATG9A-222ENST00000488833 DCTN1Q14203 1278 aa24.36■■□□□ 1.49
ATG9A-222ENST00000488833 C9orf131Q5VYM1 1079 aa24.36■■□□□ 1.49
ATG9A-222ENST00000488833 NPM2Q86SE8 214 aaKnown RBP24.36■■□□□ 1.49
ATG9A-222ENST00000488833 TBC1D2BQ9UPU7 963 aa24.36■■□□□ 1.49
ATG9A-222ENST00000488833 TBC1D9BQ66K14 1250 aa24.35■■□□□ 1.49
ATG9A-222ENST00000488833 BCORQ6W2J9 1755 aa24.34■■□□□ 1.49
ATG9A-222ENST00000488833 KIF3CO14782 793 aa24.34■■□□□ 1.49
ATG9A-222ENST00000488833 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.49
ATG9A-222ENST00000488833 NEFMP07197 916 aa24.33■■□□□ 1.49
ATG9A-222ENST00000488833 DLG5Q8TDM6 1919 aa24.32■■□□□ 1.48
ATG9A-222ENST00000488833 C2CD5Q86YS7 1000 aa24.32■■□□□ 1.48
ATG9A-222ENST00000488833 RNF181Q9P0P0 153 aa24.32■■□□□ 1.48
ATG9A-222ENST00000488833 USP16Q9Y5T5 823 aa24.32■■□□□ 1.48
ATG9A-222ENST00000488833 ANKRD31Q8N7Z5 1873 aa24.32■■□□□ 1.48
ATG9A-222ENST00000488833 PRAMEF22A3QJZ6 481 aa24.31■■□□□ 1.48
ATG9A-222ENST00000488833 CAMTA2O94983 1202 aa24.31■■□□□ 1.48
ATG9A-222ENST00000488833 SNRPA1P09661 255 aaKnown RBP24.31■■□□□ 1.48
ATG9A-222ENST00000488833 PIP4K2AP48426 406 aaPredicted RBP24.31■■□□□ 1.48
ATG9A-222ENST00000488833 SBF1O95248 1867 aa24.3■■□□□ 1.48
ATG9A-222ENST00000488833 DZIP3Q86Y13 1208 aaKnown RBP24.3■■□□□ 1.48
ATG9A-222ENST00000488833 H0YIN7 160 aa24.29■■□□□ 1.48
ATG9A-222ENST00000488833 TTLL6Q8N841 843 aa24.29■■□□□ 1.48
ATG9A-222ENST00000488833 COL11A2P13942 1736 aaPredicted RBP24.28■■□□□ 1.48
ATG9A-222ENST00000488833 HSPA6P17066 643 aa24.28■■□□□ 1.48
ATG9A-222ENST00000488833 RASSF7Q02833 373 aa24.28■■□□□ 1.48
ATG9A-222ENST00000488833 TAF7Q15545 349 aaPredicted RBP24.28■■□□□ 1.48
ATG9A-222ENST00000488833 PRR5LQ6MZQ0 368 aa24.28■■□□□ 1.48
ATG9A-222ENST00000488833 NMRK2Q9NPI5 230 aa24.28■■□□□ 1.48
ATG9A-222ENST00000488833 CCDC24Q8N4L8 307 aa24.27■■□□□ 1.48
ATG9A-222ENST00000488833 SETDB2Q96T68 719 aa24.27■■□□□ 1.48
ATG9A-222ENST00000488833 LAMB4A4D0S4 1761 aa24.26■■□□□ 1.47
ATG9A-222ENST00000488833 CEP350Q5VT06 3117 aa24.26■■□□□ 1.47
ATG9A-222ENST00000488833 NPHP1O15259 732 aa24.26■■□□□ 1.47
ATG9A-222ENST00000488833 CNBD1Q8NA66 436 aa24.26■■□□□ 1.47
ATG9A-222ENST00000488833 BRIP1Q9BX63 1249 aa24.26■■□□□ 1.47
ATG9A-222ENST00000488833 KDM3BQ7LBC6 1761 aa24.25■■□□□ 1.47
ATG9A-222ENST00000488833 PDE6BP35913 854 aa24.25■■□□□ 1.47
ATG9A-222ENST00000488833 MIS18AQ9NYP9 233 aa24.25■■□□□ 1.47
ATG9A-222ENST00000488833 NFE2L2Q16236 605 aa24.24■■□□□ 1.47
ATG9A-222ENST00000488833 ZNF622Q969S3 477 aaKnown RBP eCLIP24.24■■□□□ 1.47
ATG9A-222ENST00000488833 PLEKHF1Q96S99 279 aa24.24■■□□□ 1.47
ATG9A-222ENST00000488833 MAPK8IP3Q9UPT6 1336 aa24.24■■□□□ 1.47
ATG9A-222ENST00000488833 PDZRN3Q9UPQ7 1066 aa24.23■■□□□ 1.47
ATG9A-222ENST00000488833 KDM2BQ8NHM5 1336 aa24.22■■□□□ 1.47
ATG9A-222ENST00000488833 NBPF26B4DH59 902 aa24.22■■□□□ 1.47
ATG9A-222ENST00000488833 TOMM70O94826 608 aa24.22■■□□□ 1.47
ATG9A-222ENST00000488833 ST5P78524 1137 aa24.22■■□□□ 1.47
ATG9A-222ENST00000488833 NBPF10Q6P3W6 841 aaKnown RBP24.22■■□□□ 1.47
ATG9A-222ENST00000488833 NBPF15Q8N660 670 aa24.22■■□□□ 1.47
ATG9A-222ENST00000488833 ZNF652Q9Y2D9 606 aa24.22■■□□□ 1.47
ATG9A-222ENST00000488833 TNRC6CQ9HCJ0 1690 aaKnown RBP24.21■■□□□ 1.47
ATG9A-222ENST00000488833 PNISRQ8TF01 805 aaKnown RBP24.21■■□□□ 1.47
ATG9A-222ENST00000488833 PNNQ9H307 717 aaKnown RBP24.21■■□□□ 1.47
ATG9A-222ENST00000488833 TIAM2Q8IVF5 1701 aa24.21■■□□□ 1.47
ATG9A-222ENST00000488833 LMNB1P20700 586 aa24.2■■□□□ 1.46
ATG9A-222ENST00000488833 CLEC4GQ6UXB4 293 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms