RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 NFATC2IPQ8NCF5 419 aa8.91□□□□□ -0.98
PTCH1-211ENST00000488809 POLR3GLQ9BT43 218 aa8.91□□□□□ -0.98
PTCH1-211ENST00000488809 FER1L6Q2WGJ9 1857 aa8.91□□□□□ -0.98
PTCH1-211ENST00000488809 HSPA1AP0DMV8 641 aaKnown RBP8.9□□□□□ -0.98
PTCH1-211ENST00000488809 HSPA1BP0DMV9 641 aaKnown RBP8.9□□□□□ -0.98
PTCH1-211ENST00000488809 TM4SF1P30408 202 aa8.9□□□□□ -0.98
PTCH1-211ENST00000488809 RASSF7Q02833 373 aa8.9□□□□□ -0.98
PTCH1-211ENST00000488809 USPL1Q5W0Q7 1092 aa8.9□□□□□ -0.98
PTCH1-211ENST00000488809 TTLL6Q8N841 843 aa8.9□□□□□ -0.98
PTCH1-211ENST00000488809 PDZRN3Q9UPQ7 1066 aa8.9□□□□□ -0.98
PTCH1-211ENST00000488809 UBR2Q8IWV8 1755 aa8.89□□□□□ -0.99
PTCH1-211ENST00000488809 COL15A1P39059 1388 aa8.89□□□□□ -0.99
PTCH1-211ENST00000488809 SOS1Q07889 1333 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-211ENST00000488809 H0YIN7 160 aa8.89□□□□□ -0.99
PTCH1-211ENST00000488809 AKAP4Q5JQC9 854 aa8.89□□□□□ -0.99
PTCH1-211ENST00000488809 NARFQ9UHQ1 456 aa8.89□□□□□ -0.99
PTCH1-211ENST00000488809 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
PTCH1-211ENST00000488809 MRC1P22897 1456 aa8.89□□□□□ -0.99
PTCH1-211ENST00000488809 ARFGEF2Q9Y6D5 1785 aa8.89□□□□□ -0.99
PTCH1-211ENST00000488809 ANKRD31Q8N7Z5 1873 aa8.88□□□□□ -0.99
PTCH1-211ENST00000488809 SERPINB2P05120 415 aa8.88□□□□□ -0.99
PTCH1-211ENST00000488809 SULT6B1Q6IMI4 303 aa8.88□□□□□ -0.99
PTCH1-211ENST00000488809 INTS5Q6P9B9 1019 aaKnown RBP8.88□□□□□ -0.99
PTCH1-211ENST00000488809 DNAJC10Q8IXB1 793 aa8.88□□□□□ -0.99
PTCH1-211ENST00000488809 SLC52A2Q9HAB3 445 aa8.88□□□□□ -0.99
PTCH1-211ENST00000488809 SCN4AP35499 1836 aa8.88□□□□□ -0.99
PTCH1-211ENST00000488809 SCN7AQ01118 1682 aa8.88□□□□□ -0.99
PTCH1-211ENST00000488809 NFIXQ14938 502 aa8.87□□□□□ -0.99
PTCH1-211ENST00000488809 MORC1Q86VD1 984 aa8.87□□□□□ -0.99
PTCH1-211ENST00000488809 C2CD5Q86YS7 1000 aa8.87□□□□□ -0.99
PTCH1-211ENST00000488809 COL11A2P13942 1736 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-211ENST00000488809 A0A087WZG4 1122 aa8.86□□□□□ -0.99
PTCH1-211ENST00000488809 CYP19A1P11511 503 aaPredicted RBP8.86□□□□□ -0.99
PTCH1-211ENST00000488809 PDE6BP35913 854 aa8.86□□□□□ -0.99
PTCH1-211ENST00000488809 NPM2Q86SE8 214 aaKnown RBP8.86□□□□□ -0.99
PTCH1-211ENST00000488809 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
PTCH1-211ENST00000488809 VSIG10Q8N0Z9 540 aa8.86□□□□□ -0.99
PTCH1-211ENST00000488809 CREBZFQ9NS37 354 aa8.86□□□□□ -0.99
PTCH1-211ENST00000488809 NPHP1O15259 732 aa8.85□□□□□ -0.99
PTCH1-211ENST00000488809 STARD3NLO95772 234 aa8.85□□□□□ -0.99
PTCH1-211ENST00000488809 ERFEQ4G0M1 354 aa8.85□□□□□ -0.99
PTCH1-211ENST00000488809 SOGA3Q5TF21 947 aa8.85□□□□□ -0.99
PTCH1-211ENST00000488809 TTC5Q8N0Z6 440 aa8.85□□□□□ -0.99
PTCH1-211ENST00000488809 ZNF622Q969S3 477 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTCH1-211ENST00000488809 PANK3Q9H999 370 aa8.85□□□□□ -0.99
PTCH1-211ENST00000488809 ZBTB1Q9Y2K1 713 aa8.85□□□□□ -0.99
PTCH1-211ENST00000488809 BCORQ6W2J9 1755 aa8.84□□□□□ -0.99
PTCH1-211ENST00000488809 IQCA1LA6NCM1 817 aa8.84□□□□□ -0.99
PTCH1-211ENST00000488809 NFKBIEO00221 500 aa8.84□□□□□ -0.99
PTCH1-211ENST00000488809 RNMTO43148 476 aaKnown RBP8.84□□□□□ -0.99
PTCH1-211ENST00000488809 CHADLQ6NUI6 762 aa8.84□□□□□ -0.99
PTCH1-211ENST00000488809 AIDAQ96BJ3 306 aa8.84□□□□□ -0.99
PTCH1-211ENST00000488809 TAOK3Q9H2K8 898 aa8.84□□□□□ -0.99
PTCH1-211ENST00000488809 KNSTRNQ9Y448 316 aa8.84□□□□□ -0.99
PTCH1-211ENST00000488809 CARMIL3Q8ND23 1372 aa8.84□□□□□ -0.99
PTCH1-211ENST00000488809 LTBP3Q9NS15 1303 aa8.83□□□□□ -1
PTCH1-211ENST00000488809 SLX4Q8IY92 1834 aa8.83□□□□□ -1
PTCH1-211ENST00000488809 CANXP27824 592 aaKnown RBP8.83□□□□□ -1
PTCH1-211ENST00000488809 IL13P35225 146 aa8.83□□□□□ -1
PTCH1-211ENST00000488809 EIF4G2P78344 907 aaKnown RBP eCLIP8.83□□□□□ -1
PTCH1-211ENST00000488809 SLC39A6Q13433 755 aa8.83□□□□□ -1
PTCH1-211ENST00000488809 BICDL1Q6ZP65 573 aa8.83□□□□□ -1
PTCH1-211ENST00000488809 CNKSR1Q969H4 720 aa8.83□□□□□ -1
PTCH1-211ENST00000488809 BRIP1Q9BX63 1249 aa8.83□□□□□ -1
PTCH1-211ENST00000488809 TEX13AQ9BXU3 409 aaPredicted RBP8.83□□□□□ -1
PTCH1-211ENST00000488809 SIPA1L3O60292 1781 aaPredicted RBP8.83□□□□□ -1
PTCH1-211ENST00000488809 C21orf2O43822 256 aa8.82□□□□□ -1
PTCH1-211ENST00000488809 ST5P78524 1137 aa8.82□□□□□ -1
PTCH1-211ENST00000488809 BCL2L12Q9HB09 334 aa8.82□□□□□ -1
PTCH1-211ENST00000488809 LGR6Q9HBX8 967 aa8.82□□□□□ -1
PTCH1-211ENST00000488809 PRDM10Q9NQV6 1147 aa8.82□□□□□ -1
PTCH1-211ENST00000488809 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
PTCH1-211ENST00000488809 CLSPNQ9HAW4 1339 aa8.81□□□□□ -1
PTCH1-211ENST00000488809 POTECB2RU33 542 aa8.81□□□□□ -1
PTCH1-211ENST00000488809 IL6STP40189 918 aaPredicted RBP8.81□□□□□ -1
PTCH1-211ENST00000488809 EIF5P55010 431 aaKnown RBP8.81□□□□□ -1
PTCH1-211ENST00000488809 TEFQ10587 303 aa8.81□□□□□ -1
PTCH1-211ENST00000488809 LDHDQ86WU2 507 aa8.81□□□□□ -1
PTCH1-211ENST00000488809 CNBD1Q8NA66 436 aa8.81□□□□□ -1
PTCH1-211ENST00000488809 SETDB2Q96T68 719 aa8.81□□□□□ -1
PTCH1-211ENST00000488809 ZNF219Q9P2Y4 722 aaPredicted RBP8.81□□□□□ -1
PTCH1-211ENST00000488809 ZNF330Q9Y3S2 320 aaPredicted RBP8.81□□□□□ -1
PTCH1-211ENST00000488809 CNTNAP1P78357 1384 aa8.81□□□□□ -1
PTCH1-211ENST00000488809 HMOX1P09601 288 aa8.8□□□□□ -1
PTCH1-211ENST00000488809 CTCFP49711 727 aaPredicted RBP8.8□□□□□ -1
PTCH1-211ENST00000488809 TBC1D9BQ66K14 1250 aa8.8□□□□□ -1
PTCH1-211ENST00000488809 STYK1Q6J9G0 422 aa8.8□□□□□ -1
PTCH1-211ENST00000488809 PRR5LQ6MZQ0 368 aa8.8□□□□□ -1
PTCH1-211ENST00000488809 MASTLQ96GX5 879 aa8.8□□□□□ -1
PTCH1-211ENST00000488809 HEG1Q9ULI3 1381 aa8.79□□□□□ -1
PTCH1-211ENST00000488809 TMEM88BA6NKF7 163 aa8.79□□□□□ -1
PTCH1-211ENST00000488809 FOXN1O15353 648 aa8.79□□□□□ -1
PTCH1-211ENST00000488809 DIAPH1O60610 1272 aaKnown RBP8.79□□□□□ -1
PTCH1-211ENST00000488809 DDNO94850 711 aaPredicted RBP8.79□□□□□ -1
PTCH1-211ENST00000488809 MTHFSDQ2M296 383 aaKnown RBP8.79□□□□□ -1
PTCH1-211ENST00000488809 CCDC93Q567U6 631 aa8.79□□□□□ -1
PTCH1-211ENST00000488809 PRPF40BQ6NWY9 871 aaKnown RBP8.79□□□□□ -1
PTCH1-211ENST00000488809 GAS2L2Q8NHY3 880 aa8.79□□□□□ -1
PTCH1-211ENST00000488809 TRPM7Q96QT4 1865 aa8.79□□□□□ -1
PTCH1-211ENST00000488809 SRGNP10124 158 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms