RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 GLTPD2A6NH11 291 aa14.88□□□□□ -0.03
LCN2-206ENST00000488391 DNAJC10Q8IXB1 793 aa14.88□□□□□ -0.03
LCN2-206ENST00000488391 PCNTO95613 3336 aa14.87□□□□□ -0.03
LCN2-206ENST00000488391 HSPA1AP0DMV8 641 aaKnown RBP14.87□□□□□ -0.03
LCN2-206ENST00000488391 HSPA1BP0DMV9 641 aaKnown RBP14.87□□□□□ -0.03
LCN2-206ENST00000488391 LMNB1P20700 586 aa14.87□□□□□ -0.03
LCN2-206ENST00000488391 TNRC6CQ9HCJ0 1690 aaKnown RBP14.87□□□□□ -0.03
LCN2-206ENST00000488391 NFIXQ14938 502 aa14.86□□□□□ -0.03
LCN2-206ENST00000488391 SULT6B1Q6IMI4 303 aa14.86□□□□□ -0.03
LCN2-206ENST00000488391 TTLL6Q8N841 843 aa14.85□□□□□ -0.03
LCN2-206ENST00000488391 CCDC88AQ3V6T2 1871 aa14.84□□□□□ -0.03
LCN2-206ENST00000488391 SERPINB2P05120 415 aa14.84□□□□□ -0.03
LCN2-206ENST00000488391 SLC39A6Q13433 755 aa14.84□□□□□ -0.03
LCN2-206ENST00000488391 C2CD5Q86YS7 1000 aa14.84□□□□□ -0.03
LCN2-206ENST00000488391 PANK3Q9H999 370 aa14.84□□□□□ -0.03
LCN2-206ENST00000488391 LGR6Q9HBX8 967 aa14.84□□□□□ -0.03
LCN2-206ENST00000488391 NARFQ9UHQ1 456 aa14.84□□□□□ -0.03
LCN2-206ENST00000488391 SOS1Q07889 1333 aaPredicted RBP14.84□□□□□ -0.03
LCN2-206ENST00000488391 ZC3H4Q9UPT8 1303 aaKnown RBP14.84□□□□□ -0.03
LCN2-206ENST00000488391 TJP1Q07157 1748 aa14.83□□□□□ -0.03
LCN2-206ENST00000488391 POTECB2RU33 542 aa14.83□□□□□ -0.04
LCN2-206ENST00000488391 CYP19A1P11511 503 aaPredicted RBP14.83□□□□□ -0.04
LCN2-206ENST00000488391 AFDNP55196 1824 aaKnown RBP14.82□□□□□ -0.04
LCN2-206ENST00000488391 ADAMTS7Q9UKP4 1686 aa14.82□□□□□ -0.04
LCN2-206ENST00000488391 H0YIN7 160 aa14.82□□□□□ -0.04
LCN2-206ENST00000488391 BICDL1Q6ZP65 573 aa14.82□□□□□ -0.04
LCN2-206ENST00000488391 MORC1Q86VD1 984 aa14.82□□□□□ -0.04
LCN2-206ENST00000488391 SLC52A2Q9HAB3 445 aa14.82□□□□□ -0.04
LCN2-206ENST00000488391 BCL2L12Q9HB09 334 aa14.82□□□□□ -0.04
LCN2-206ENST00000488391 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
LCN2-206ENST00000488391 NFKBIEO00221 500 aa14.81□□□□□ -0.04
LCN2-206ENST00000488391 DPY19L2Q6NUT2 758 aa14.81□□□□□ -0.04
LCN2-206ENST00000488391 ZBTB1Q9Y2K1 713 aa14.81□□□□□ -0.04
LCN2-206ENST00000488391 KIF7Q2M1P5 1343 aa14.81□□□□□ -0.04
LCN2-206ENST00000488391 CANXP27824 592 aaKnown RBP14.8□□□□□ -0.04
LCN2-206ENST00000488391 AKAP4Q5JQC9 854 aa14.8□□□□□ -0.04
LCN2-206ENST00000488391 ZNF622Q969S3 477 aaKnown RBP eCLIP14.8□□□□□ -0.04
LCN2-206ENST00000488391 RNMTO43148 476 aaKnown RBP14.79□□□□□ -0.04
LCN2-206ENST00000488391 IL13P35225 146 aa14.79□□□□□ -0.04
LCN2-206ENST00000488391 COL15A1P39059 1388 aa14.79□□□□□ -0.04
LCN2-206ENST00000488391 SCN11AQ9UI33 1791 aa14.79□□□□□ -0.04
LCN2-206ENST00000488391 CARMIL3Q8ND23 1372 aa14.78□□□□□ -0.04
LCN2-206ENST00000488391 C21orf2O43822 256 aa14.78□□□□□ -0.04
LCN2-206ENST00000488391 DDX10Q13206 875 aaKnown RBP14.78□□□□□ -0.04
LCN2-206ENST00000488391 ERFEQ4G0M1 354 aa14.78□□□□□ -0.04
LCN2-206ENST00000488391 CCDC24Q8N4L8 307 aa14.78□□□□□ -0.04
LCN2-206ENST00000488391 MKRN1Q9UHC7 482 aaKnown RBP14.78□□□□□ -0.04
LCN2-206ENST00000488391 NRXN2Q9P2S2 1712 aa14.76□□□□□ -0.05
LCN2-206ENST00000488391 HMOX1P09601 288 aa14.76□□□□□ -0.05
LCN2-206ENST00000488391 CHADLQ6NUI6 762 aa14.76□□□□□ -0.05
LCN2-206ENST00000488391 TIAM2Q8IVF5 1701 aa14.75□□□□□ -0.05
LCN2-206ENST00000488391 DDNO94850 711 aaPredicted RBP14.75□□□□□ -0.05
LCN2-206ENST00000488391 POTEIP0CG38 1075 aa14.75□□□□□ -0.05
LCN2-206ENST00000488391 POTEJP0CG39 1038 aa14.75□□□□□ -0.05
LCN2-206ENST00000488391 TBC1D9BQ66K14 1250 aa14.75□□□□□ -0.05
LCN2-206ENST00000488391 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
LCN2-206ENST00000488391 DLEC1Q9Y238 1755 aa14.75□□□□□ -0.05
LCN2-206ENST00000488391 EIF5P55010 431 aaKnown RBP14.74□□□□□ -0.05
LCN2-206ENST00000488391 VSIG10Q8N0Z9 540 aa14.74□□□□□ -0.05
LCN2-206ENST00000488391 BRIP1Q9BX63 1249 aa14.74□□□□□ -0.05
LCN2-206ENST00000488391 TBC1D2BQ9UPU7 963 aa14.74□□□□□ -0.05
LCN2-206ENST00000488391 FOXN1O15353 648 aa14.73□□□□□ -0.05
LCN2-206ENST00000488391 STARD3NLO95772 234 aa14.73□□□□□ -0.05
LCN2-206ENST00000488391 PDE6BP35913 854 aa14.73□□□□□ -0.05
LCN2-206ENST00000488391 MTHFSDQ2M296 383 aaKnown RBP14.73□□□□□ -0.05
LCN2-206ENST00000488391 ZNF330Q9Y3S2 320 aaPredicted RBP14.73□□□□□ -0.05
LCN2-206ENST00000488391 A0A087WZG4 1122 aa14.72□□□□□ -0.05
LCN2-206ENST00000488391 PRR5LQ6MZQ0 368 aa14.72□□□□□ -0.05
LCN2-206ENST00000488391 KNSTRNQ9Y448 316 aa14.72□□□□□ -0.05
LCN2-206ENST00000488391 DICER1Q9UPY3 1922 aaKnown RBP14.71□□□□□ -0.05
LCN2-206ENST00000488391 TAOK3Q9H2K8 898 aa14.71□□□□□ -0.05
LCN2-206ENST00000488391 PDZRN3Q9UPQ7 1066 aa14.71□□□□□ -0.05
LCN2-206ENST00000488391 ANKRD31Q8N7Z5 1873 aa14.71□□□□□ -0.05
LCN2-206ENST00000488391 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.06
LCN2-206ENST00000488391 NPHP1O15259 732 aa14.7□□□□□ -0.06
LCN2-206ENST00000488391 TTC5Q8N0Z6 440 aa14.7□□□□□ -0.06
LCN2-206ENST00000488391 FER1L6Q2WGJ9 1857 aa14.69□□□□□ -0.06
LCN2-206ENST00000488391 CNKSR1Q969H4 720 aa14.69□□□□□ -0.06
LCN2-206ENST00000488391 ZNF496Q96IT1 587 aaPredicted RBP14.69□□□□□ -0.06
LCN2-206ENST00000488391 MRC1P22897 1456 aa14.69□□□□□ -0.06
LCN2-206ENST00000488391 SLX4Q8IY92 1834 aa14.69□□□□□ -0.06
LCN2-206ENST00000488391 LTBP3Q9NS15 1303 aa14.68□□□□□ -0.06
LCN2-206ENST00000488391 A1BGP04217 495 aa14.68□□□□□ -0.06
LCN2-206ENST00000488391 VEGFBP49765 207 aa14.68□□□□□ -0.06
LCN2-206ENST00000488391 PRPF40BQ6NWY9 871 aaKnown RBP14.68□□□□□ -0.06
LCN2-206ENST00000488391 SETDB2Q96T68 719 aa14.68□□□□□ -0.06
LCN2-206ENST00000488391 CNTNAP1P78357 1384 aa14.68□□□□□ -0.06
LCN2-206ENST00000488391 SRGNP10124 158 aa14.67□□□□□ -0.06
LCN2-206ENST00000488391 STYK1Q6J9G0 422 aa14.67□□□□□ -0.06
LCN2-206ENST00000488391 CNBD1Q8NA66 436 aa14.67□□□□□ -0.06
LCN2-206ENST00000488391 AIDAQ96BJ3 306 aa14.67□□□□□ -0.06
LCN2-206ENST00000488391 TEX13AQ9BXU3 409 aaPredicted RBP14.67□□□□□ -0.06
LCN2-206ENST00000488391 TAF1DQ9H5J8 278 aaPredicted RBP14.67□□□□□ -0.06
LCN2-206ENST00000488391 PRDM10Q9NQV6 1147 aa14.67□□□□□ -0.06
LCN2-206ENST00000488391 PASKQ96RG2 1323 aa14.66□□□□□ -0.06
LCN2-206ENST00000488391 IQCA1LA6NCM1 817 aa14.66□□□□□ -0.06
LCN2-206ENST00000488391 IL6STP40189 918 aaPredicted RBP14.66□□□□□ -0.06
LCN2-206ENST00000488391 CTCFP49711 727 aaPredicted RBP14.66□□□□□ -0.06
LCN2-206ENST00000488391 TEFQ10587 303 aa14.66□□□□□ -0.06
LCN2-206ENST00000488391 EAPPQ56P03 285 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms