RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 USP54Q70EL1 1684 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 IBTKQ9P2D0 1353 aaPredicted RBP3.21□□□□□ -1.9
C9orf72-205ENST00000488117 TTC41PQ6P2S7 1318 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 GLRX3O76003 335 aaKnown RBP3.21□□□□□ -1.9
C9orf72-205ENST00000488117 ZKSCAN1P17029 563 aaPredicted RBP3.21□□□□□ -1.9
C9orf72-205ENST00000488117 AIMP1Q12904 312 aaKnown RBP3.21□□□□□ -1.9
C9orf72-205ENST00000488117 PPP1R42Q7Z4L9 355 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 ARHGEF25Q86VW2 580 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 ESYT1Q9BSJ8 1104 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 DDX49Q9Y6V7 483 aaKnown RBP3.21□□□□□ -1.9
C9orf72-205ENST00000488117 ATP10DQ9P241 1426 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 LRRC37A3O60309 1634 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 PI4KAP2A4QPH2 592 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 PHF14O94880 888 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 NEK4P51957 841 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 ZC3H6P61129 1189 aaKnown RBP3.21□□□□□ -1.9
C9orf72-205ENST00000488117 RNF20Q5VTR2 975 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 NUTM1Q86Y26 1132 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 PI4KAP1Q8N8J0 262 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 RHPN1Q8TCX5 695 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 TNPO1Q92973 898 aaKnown RBP3.21□□□□□ -1.9
C9orf72-205ENST00000488117 ATP6V1DQ9Y5K8 247 aa3.21□□□□□ -1.9
C9orf72-205ENST00000488117 RGS12O14924 1447 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 EVA1CP58658 441 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 RAB3GAP1Q15042 981 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 FMNL2Q96PY5 1086 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 ORAI2Q96SN7 254 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 ANTXR1Q9H6X2 564 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 PHAXQ9H814 394 aaKnown RBP3.2□□□□□ -1.9
C9orf72-205ENST00000488117 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.2□□□□□ -1.9
C9orf72-205ENST00000488117 NCOA3Q9Y6Q9 1424 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 CAPN15O75808 1086 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 SNRPA1P09661 255 aaKnown RBP3.2□□□□□ -1.9
C9orf72-205ENST00000488117 PSMA5P28066 241 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 MCTP1Q6DN14 999 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 SSH3Q8TE77 659 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 LGR6Q9HBX8 967 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 IL1RAPL2Q9NP60 686 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 CHD2O14647 1828 aaKnown RBP3.2□□□□□ -1.9
C9orf72-205ENST00000488117 FAM208AQ9UK61 1670 aaKnown RBP3.2□□□□□ -1.9
C9orf72-205ENST00000488117 C1orf167Q5SNV9 1468 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 CEMIPQ8WUJ3 1361 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 LRRFIP1Q32MZ4 808 aaKnown RBP3.2□□□□□ -1.9
C9orf72-205ENST00000488117 NOL8Q76FK4 1167 aaKnown RBP3.2□□□□□ -1.9
C9orf72-205ENST00000488117 AACSQ86V21 672 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 CHMP4CQ96CF2 233 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 DCAF5Q96JK2 942 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 STAP2Q9UGK3 403 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 CHMP3Q9Y3E7 222 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 SLIT3O75094 1523 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 NFAT5O94916 1531 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 DCCP43146 1447 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 LTN1O94822 1766 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 NWD1Q149M9 1564 aa3.2□□□□□ -1.9
C9orf72-205ENST00000488117 MBD3O95983 291 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 MYL6BP14649 208 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 TOM1L2Q6ZVM7 507 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 LINS1Q8NG48 757 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 OTUD7AQ8TE49 926 aaPredicted RBP3.19□□□□□ -1.9
C9orf72-205ENST00000488117 EVI5LQ96CN4 794 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 ZSCAN31Q96LW9 406 aaPredicted RBP3.19□□□□□ -1.9
C9orf72-205ENST00000488117 DDX21Q9NR30 783 aaKnown RBP eCLIP3.19□□□□□ -1.9
C9orf72-205ENST00000488117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.19□□□□□ -1.92e-6■■■□□ 15.8
C9orf72-205ENST00000488117 PLEKHG2Q9H7P9 1386 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 RGPD8O14715 1765 aaPredicted RBP3.19□□□□□ -1.9
C9orf72-205ENST00000488117 ADAMTSL3P82987 1691 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 PNMA6EA0A0J9YXQ4 647 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 PDIA4P13667 645 aaKnown RBP3.19□□□□□ -1.9
C9orf72-205ENST00000488117 CHMLP26374 656 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 C1QBPQ07021 282 aaKnown RBP3.19□□□□□ -1.9
C9orf72-205ENST00000488117 BEND3Q5T5X7 828 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 MYD88Q99836 296 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 FSD1Q9BTV5 496 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 USP44Q9H0E7 712 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 SLC52A2Q9HAB3 445 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 PRDM11Q9NQV5 511 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 ECHDC1Q9NTX5 307 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 PCDH11XQ9BZA7 1347 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 PCDH11YQ9BZA8 1340 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 GRM8O00222 908 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 MAP4K4O95819 1239 aaPredicted RBP3.19□□□□□ -1.9
C9orf72-205ENST00000488117 FGD1P98174 961 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 POLA2Q14181 598 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 TNS3Q68CZ2 1445 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 FAM43AQ8N2R8 423 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 SMC3Q9UQE7 1217 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 WDR33Q9C0J8 1336 aaKnown RBP3.19□□□□□ -1.9
C9orf72-205ENST00000488117 TMEM94Q12767 1356 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 GIGYF1O75420 1035 aaPredicted RBP3.19□□□□□ -1.9
C9orf72-205ENST00000488117 SSFA2P28290 1259 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 ANKRD1Q15327 319 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 TAF7LQ5H9L4 462 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 ZNF790Q6PG37 636 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 KIF6Q6ZMV9 814 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 CYP46A1Q9Y6A2 500 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 RAD50Q92878 1312 aa3.19□□□□□ -1.9
C9orf72-205ENST00000488117 PHKG2P15735 406 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 GORABQ5T7V8 394 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 GRPEL1Q9HAV7 217 aa3.18□□□□□ -1.9
C9orf72-205ENST00000488117 RTN4Q9NQC3 1192 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms