RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, human

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLOD3-215	ENST00000487563	CANX	P27824	592 aa	Known RBP	31.48	■■■□□ 2.63
PLOD3-215	ENST00000487563	DDR1	Q08345	913 aa		31.48	■■■□□ 2.63
PLOD3-215	ENST00000487563	ZNF496	Q96IT1	587 aa	Predicted RBP	31.48	■■■□□ 2.63
PLOD3-215	ENST00000487563	BCS1L	Q9Y276	419 aa		31.48	■■■□□ 2.63
PLOD3-215	ENST00000487563	CEMIP	Q8WUJ3	1361 aa		31.47	■■■□□ 2.63
PLOD3-215	ENST00000487563	HEG1	Q9ULI3	1381 aa		31.47	■■■□□ 2.63
PLOD3-215	ENST00000487563	FCHSD2	O94868	740 aa		31.47	■■■□□ 2.63
PLOD3-215	ENST00000487563	DPEP1	P16444	411 aa		31.47	■■■□□ 2.63
PLOD3-215	ENST00000487563	RTF1	Q92541	710 aa	Known RBP	31.47	■■■□□ 2.63
PLOD3-215	ENST00000487563	ATP10D	Q9P241	1426 aa		31.47	■■■□□ 2.63
PLOD3-215	ENST00000487563	NARF	Q9UHQ1	456 aa		31.46	■■■□□ 2.63
PLOD3-215	ENST00000487563	FMNL2	Q96PY5	1086 aa		31.45	■■■□□ 2.63
PLOD3-215	ENST00000487563	TEX13A	Q9BXU3	409 aa	Predicted RBP	31.45	■■■□□ 2.63
PLOD3-215	ENST00000487563	BTBD11	A6QL63	1104 aa		31.44	■■■□□ 2.62
PLOD3-215	ENST00000487563	POLRMT	O00411	1230 aa	Known RBP	31.43	■■■□□ 2.62
PLOD3-215	ENST00000487563	TM4SF1	P30408	202 aa		31.42	■■■□□ 2.62
PLOD3-215	ENST00000487563	C1QTNF8	P60827	252 aa		31.42	■■■□□ 2.62
PLOD3-215	ENST00000487563	NEFM	P07197	916 aa		31.41	■■■□□ 2.62
PLOD3-215	ENST00000487563		A0A087WZG4	1122 aa		31.4	■■■□□ 2.62
PLOD3-215	ENST00000487563	ZNF330	Q9Y3S2	320 aa	Predicted RBP	31.4	■■■□□ 2.62
PLOD3-215	ENST00000487563	ADCY9	O60503	1353 aa		31.4	■■■□□ 2.62
PLOD3-215	ENST00000487563	MCM10	Q7L590	875 aa		31.39	■■■□□ 2.62
PLOD3-215	ENST00000487563	NFIX	Q14938	502 aa		31.38	■■■□□ 2.61
PLOD3-215	ENST00000487563	NPM2	Q86SE8	214 aa	Known RBP	31.38	■■■□□ 2.61
PLOD3-215	ENST00000487563	GPBP1L1	Q9HC44	474 aa	Predicted RBP	31.38	■■■□□ 2.61
PLOD3-215	ENST00000487563	PIM2	Q9P1W9	311 aa		31.38	■■■□□ 2.61
PLOD3-215	ENST00000487563	EIF5	P55010	431 aa	Known RBP	31.37	■■■□□ 2.61
PLOD3-215	ENST00000487563	ZNF526	Q8TF50	670 aa	Predicted RBP	31.37	■■■□□ 2.61
PLOD3-215	ENST00000487563	BRCA1	P38398	1863 aa	Known RBP	31.37	■■■□□ 2.61
PLOD3-215	ENST00000487563	KCNQ3	O43525	872 aa		31.36	■■■□□ 2.61
PLOD3-215	ENST00000487563	ARHGAP27	Q6ZUM4	889 aa		31.36	■■■□□ 2.61
PLOD3-215	ENST00000487563	BCL2L12	Q9HB09	334 aa		31.35	■■■□□ 2.61
PLOD3-215	ENST00000487563	HTATSF1	O43719	755 aa	Known RBP	31.34	■■■□□ 2.61
PLOD3-215	ENST00000487563	KCNA3	P22001	575 aa		31.34	■■■□□ 2.61
PLOD3-215	ENST00000487563	DCTN1	Q14203	1278 aa		31.34	■■■□□ 2.61
PLOD3-215	ENST00000487563	CHRNA5	P30532	468 aa		31.33	■■■□□ 2.61
PLOD3-215	ENST00000487563	IL6ST	P40189	918 aa	Predicted RBP	31.33	■■■□□ 2.61
PLOD3-215	ENST00000487563	DALRD3	Q5D0E6	543 aa	Known RBP	31.33	■■■□□ 2.61
PLOD3-215	ENST00000487563	SENP3-EIF4A1	A0A087X0R7	540 aa		31.32	■■■□□ 2.6
PLOD3-215	ENST00000487563	SERPINB2	P05120	415 aa		31.32	■■■□□ 2.6
PLOD3-215	ENST00000487563	BICDL1	Q6ZP65	573 aa		31.32	■■■□□ 2.6
PLOD3-215	ENST00000487563	AFDN	P55196	1824 aa	Known RBP	31.32	■■■□□ 2.6
PLOD3-215	ENST00000487563	A1BG	P04217	495 aa		31.31	■■■□□ 2.6
PLOD3-215	ENST00000487563	SCN7A	Q01118	1682 aa		31.31	■■■□□ 2.6
PLOD3-215	ENST00000487563	TBC1D2B	Q9UPU7	963 aa		31.3	■■■□□ 2.6
PLOD3-215	ENST00000487563	ARFGEF1	Q9Y6D6	1849 aa		31.3	■■■□□ 2.6
PLOD3-215	ENST00000487563	NRXN2	Q9P2S2	1712 aa		31.29	■■■□□ 2.6
PLOD3-215	ENST00000487563	SNRPA1	P09661	255 aa	Known RBP	31.28	■■■□□ 2.6
PLOD3-215	ENST00000487563	MAPK8IP3	Q9UPT6	1336 aa		31.26	■■■□□ 2.6
PLOD3-215	ENST00000487563	PNN	Q9H307	717 aa	Known RBP	31.26	■■■□□ 2.59
PLOD3-215	ENST00000487563	USP16	Q9Y5T5	823 aa		31.26	■■■□□ 2.59
PLOD3-215	ENST00000487563	RALBP1	Q15311	655 aa		31.25	■■■□□ 2.59
PLOD3-215	ENST00000487563	TAF7	Q15545	349 aa	Predicted RBP	31.25	■■■□□ 2.59
PLOD3-215	ENST00000487563	TBC1D9B	Q66K14	1250 aa		31.25	■■■□□ 2.59
PLOD3-215	ENST00000487563	PRAMEF22	A3QJZ6	481 aa		31.23	■■■□□ 2.59
PLOD3-215	ENST00000487563	DZIP3	Q86Y13	1208 aa	Known RBP	31.23	■■■□□ 2.59
PLOD3-215	ENST00000487563	DLG5	Q8TDM6	1919 aa		31.22	■■■□□ 2.59
PLOD3-215	ENST00000487563	CARMIL3	Q8ND23	1372 aa		31.22	■■■□□ 2.59
PLOD3-215	ENST00000487563	PIP4K2A	P48426	406 aa	Predicted RBP	31.22	■■■□□ 2.59
PLOD3-215	ENST00000487563	DDX10	Q13206	875 aa	Known RBP	31.22	■■■□□ 2.59
PLOD3-215	ENST00000487563	NFE2L2	Q16236	605 aa		31.22	■■■□□ 2.59
PLOD3-215	ENST00000487563	PLEKHF1	Q96S99	279 aa		31.22	■■■□□ 2.59
PLOD3-215	ENST00000487563	C2CD5	Q86YS7	1000 aa		31.21	■■■□□ 2.59
PLOD3-215	ENST00000487563	NPHP1	O15259	732 aa		31.2	■■■□□ 2.59
PLOD3-215	ENST00000487563	CAMTA2	O94983	1202 aa		31.2	■■■□□ 2.59
PLOD3-215	ENST00000487563	PNISR	Q8TF01	805 aa	Known RBP	31.2	■■■□□ 2.59
PLOD3-215	ENST00000487563		H0YIN7	160 aa		31.19	■■■□□ 2.58
PLOD3-215	ENST00000487563	C9orf131	Q5VYM1	1079 aa		31.19	■■■□□ 2.58
PLOD3-215	ENST00000487563	SETDB2	Q96T68	719 aa		31.19	■■■□□ 2.58
PLOD3-215	ENST00000487563	MIS18A	Q9NYP9	233 aa		31.19	■■■□□ 2.58
PLOD3-215	ENST00000487563	BCOR	Q6W2J9	1755 aa		31.19	■■■□□ 2.58
PLOD3-215	ENST00000487563	DLEC1	Q9Y238	1755 aa		31.18	■■■□□ 2.58
PLOD3-215	ENST00000487563	TTLL6	Q8N841	843 aa		31.16	■■■□□ 2.58
PLOD3-215	ENST00000487563	ZNF652	Q9Y2D9	606 aa		31.16	■■■□□ 2.58
PLOD3-215	ENST00000487563	PRR5L	Q6MZQ0	368 aa		31.15	■■■□□ 2.58
PLOD3-215	ENST00000487563	CNBD1	Q8NA66	436 aa		31.15	■■■□□ 2.58
PLOD3-215	ENST00000487563	RNF181	Q9P0P0	153 aa		31.15	■■■□□ 2.58
PLOD3-215	ENST00000487563	PDE6B	P35913	854 aa		31.14	■■■□□ 2.58
PLOD3-215	ENST00000487563	THUMPD2	Q9BTF0	503 aa	Known RBP	31.14	■■■□□ 2.58
PLOD3-215	ENST00000487563	BRIP1	Q9BX63	1249 aa		31.14	■■■□□ 2.58
PLOD3-215	ENST00000487563	LAMB4	A4D0S4	1761 aa		31.14	■■■□□ 2.58
PLOD3-215	ENST00000487563	KDM3B	Q7LBC6	1761 aa		31.14	■■■□□ 2.58
PLOD3-215	ENST00000487563	CCDC24	Q8N4L8	307 aa		31.13	■■■□□ 2.57
PLOD3-215	ENST00000487563	PDZRN3	Q9UPQ7	1066 aa		31.13	■■■□□ 2.57
PLOD3-215	ENST00000487563	MYBBP1A	Q9BQG0	1328 aa	Known RBP	31.13	■■■□□ 2.57
PLOD3-215	ENST00000487563	ST5	P78524	1137 aa		31.12	■■■□□ 2.57
PLOD3-215	ENST00000487563	ANKRD31	Q8N7Z5	1873 aa		31.12	■■■□□ 2.57
PLOD3-215	ENST00000487563	NBPF26	B4DH59	902 aa		31.11	■■■□□ 2.57
PLOD3-215	ENST00000487563	KIF3C	O14782	793 aa		31.11	■■■□□ 2.57
PLOD3-215	ENST00000487563	NBPF10	Q6P3W6	841 aa	Known RBP	31.11	■■■□□ 2.57
PLOD3-215	ENST00000487563	NBPF15	Q8N660	670 aa		31.11	■■■□□ 2.57
PLOD3-215	ENST00000487563	ZNF622	Q969S3	477 aa	Known RBP eCLIP	31.11	■■■□□ 2.57
PLOD3-215	ENST00000487563	CLEC4G	Q6UXB4	293 aa		31.1	■■■□□ 2.57
PLOD3-215	ENST00000487563	RASSF7	Q02833	373 aa		31.09	■■■□□ 2.57
PLOD3-215	ENST00000487563	NBPF5P	Q86XG9	351 aa	Predicted RBP	31.08	■■■□□ 2.57
PLOD3-215	ENST00000487563	EIF4A1	P60842	406 aa	Known RBP	31.07	■■■□□ 2.56
PLOD3-215	ENST00000487563	COL11A2	P13942	1736 aa	Predicted RBP	31.07	■■■□□ 2.56
PLOD3-215	ENST00000487563	RIPK4	P57078	832 aa		31.06	■■■□□ 2.56
PLOD3-215	ENST00000487563	NMRK2	Q9NPI5	230 aa		31.05	■■■□□ 2.56
PLOD3-215	ENST00000487563	KDM2B	Q8NHM5	1336 aa		31.04	■■■□□ 2.56

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