RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 ABCC5O15440 1437 aa16.3■□□□□ 0.2
TFAM-204ENST00000487519 SMTNL1A8MU46 457 aa16.3■□□□□ 0.2
TFAM-204ENST00000487519 IFIT3O14879 490 aaKnown RBP16.3■□□□□ 0.2
TFAM-204ENST00000487519 EPB41L2O43491 1005 aaKnown RBP16.3■□□□□ 0.2
TFAM-204ENST00000487519 CCT2P78371 535 aaKnown RBP16.3■□□□□ 0.2
TFAM-204ENST00000487519 SCLT1Q96NL6 688 aa16.3■□□□□ 0.2
TFAM-204ENST00000487519 GOLIM4O00461 696 aa16.29■□□□□ 0.2
TFAM-204ENST00000487519 SEPT7Q16181 437 aaKnown RBP16.29■□□□□ 0.2
TFAM-204ENST00000487519 IFNL2Q8IZJ0 200 aa16.29■□□□□ 0.2
TFAM-204ENST00000487519 CCDC191Q8NCU4 936 aa16.29■□□□□ 0.2
TFAM-204ENST00000487519 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
TFAM-204ENST00000487519 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
TFAM-204ENST00000487519 KIAA1328Q86T90 577 aa16.29■□□□□ 0.2
TFAM-204ENST00000487519 TTLL12Q14166 644 aaPredicted RBP16.29■□□□□ 0.2
TFAM-204ENST00000487519 TAX1BP1Q86VP1 789 aa16.29■□□□□ 0.2
TFAM-204ENST00000487519 IQGAP2Q13576 1575 aa16.29■□□□□ 0.2
TFAM-204ENST00000487519 PI4KAP2A4QPH2 592 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 ARHGAP29Q52LW3 1261 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 PI4KAP1Q8N8J0 262 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 NOS1P29475 1434 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 TNIP1Q15025 636 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 SLC4A8Q2Y0W8 1093 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 GOLGA8BA8MQT2 603 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 FAM193AP78312 1265 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 TRMT1LQ7Z2T5 733 aaKnown RBP16.28■□□□□ 0.2
TFAM-204ENST00000487519 MTERF4Q7Z6M4 381 aaKnown RBP16.28■□□□□ 0.2
TFAM-204ENST00000487519 PPFIA3O75145 1194 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 TSHZ3Q63HK5 1081 aa16.28■□□□□ 0.2
TFAM-204ENST00000487519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.28■□□□□ 0.2
TFAM-204ENST00000487519 NKTRP30414 1462 aaKnown RBP16.27■□□□□ 0.2
TFAM-204ENST00000487519 ACEP12821 1306 aa16.27■□□□□ 0.2
TFAM-204ENST00000487519 GOLGA8AA7E2F4 631 aa16.27■□□□□ 0.2
TFAM-204ENST00000487519 PPP1R12BO60237 982 aaPredicted RBP16.27■□□□□ 0.19
TFAM-204ENST00000487519 PDIA4P13667 645 aaKnown RBP16.27■□□□□ 0.19
TFAM-204ENST00000487519 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.19
TFAM-204ENST00000487519 CWC15Q9P013 229 aaKnown RBP16.27■□□□□ 0.19
TFAM-204ENST00000487519 HAND2P61296 217 aa16.26■□□□□ 0.19
TFAM-204ENST00000487519 ECHDC1Q9NTX5 307 aa16.26■□□□□ 0.19
TFAM-204ENST00000487519 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
TFAM-204ENST00000487519 CCDC144CPQ8IYA2 1237 aa16.26■□□□□ 0.19
TFAM-204ENST00000487519 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
TFAM-204ENST00000487519 ENOX2Q16206 610 aaKnown RBP16.26■□□□□ 0.19
TFAM-204ENST00000487519 RNF41Q9H4P4 317 aaPredicted RBP16.26■□□□□ 0.19
TFAM-204ENST00000487519 SH2B1Q9NRF2 756 aaPredicted RBP16.26■□□□□ 0.19
TFAM-204ENST00000487519 MBIPQ9NS73 344 aa16.26■□□□□ 0.19
TFAM-204ENST00000487519 CWC25Q9NXE8 425 aaPredicted RBP16.26■□□□□ 0.19
TFAM-204ENST00000487519 CCDC194A0A1B0GVG4 234 aa16.26■□□□□ 0.19
TFAM-204ENST00000487519 LEKR1Q6ZMV7 388 aa16.26■□□□□ 0.19
TFAM-204ENST00000487519 NLRP5P59047 1200 aa16.25■□□□□ 0.19
TFAM-204ENST00000487519 TAF4BQ92750 862 aa16.25■□□□□ 0.19
TFAM-204ENST00000487519 SCAND2PQ9GZW5 306 aaPredicted RBP16.25■□□□□ 0.19
TFAM-204ENST00000487519 HMGXB3Q12766 1538 aa16.25■□□□□ 0.19
TFAM-204ENST00000487519 NEBLO76041 1014 aa16.25■□□□□ 0.19
TFAM-204ENST00000487519 HMGB1P09429 215 aaKnown RBP16.25■□□□□ 0.19
TFAM-204ENST00000487519 RAB11FIP4Q86YS3 637 aa16.25■□□□□ 0.19
TFAM-204ENST00000487519 PPP1R42Q7Z4L9 355 aa16.25■□□□□ 0.19
TFAM-204ENST00000487519 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
TFAM-204ENST00000487519 ERLIN1O75477 346 aa16.25■□□□□ 0.19
TFAM-204ENST00000487519 VAT1LQ9HCJ6 419 aa16.24■□□□□ 0.19
TFAM-204ENST00000487519 LIMCH1Q9UPQ0 1083 aa16.24■□□□□ 0.19
TFAM-204ENST00000487519 PAXIP1Q6ZW49 1069 aaPredicted RBP16.24■□□□□ 0.19
TFAM-204ENST00000487519 PTPRCP08575 1304 aa16.24■□□□□ 0.19
TFAM-204ENST00000487519 DDX46Q7L014 1031 aaKnown RBP16.24■□□□□ 0.19
TFAM-204ENST00000487519 CDC5LQ99459 802 aaKnown RBP16.24■□□□□ 0.19
TFAM-204ENST00000487519 SSRP1Q08945 709 aaKnown RBP16.24■□□□□ 0.19
TFAM-204ENST00000487519 DESP17661 470 aa16.24■□□□□ 0.19
TFAM-204ENST00000487519 CATIPQ7Z7H3 387 aa16.24■□□□□ 0.19
TFAM-204ENST00000487519 ZNF397Q8NF99 534 aaPredicted RBP16.24■□□□□ 0.19
TFAM-204ENST00000487519 PCF11O94913 1555 aaKnown RBP16.23■□□□□ 0.19
TFAM-204ENST00000487519 CUL5Q93034 780 aa16.23■□□□□ 0.19
TFAM-204ENST00000487519 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
TFAM-204ENST00000487519 FEZ1Q99689 392 aa16.23■□□□□ 0.19
TFAM-204ENST00000487519 C14orf93Q9H972 538 aaKnown RBP16.23■□□□□ 0.19
TFAM-204ENST00000487519 CKAP2LQ8IYA6 745 aa16.23■□□□□ 0.19
TFAM-204ENST00000487519 SFPQP23246 707 aaKnown RBP eCLIP16.23■□□□□ 0.19
TFAM-204ENST00000487519 SLF2Q8IX21 1173 aa16.23■□□□□ 0.19
TFAM-204ENST00000487519 ZNF622Q969S3 477 aaKnown RBP eCLIP16.23■□□□□ 0.192e-7■□□□□ 8.6
TFAM-204ENST00000487519 TEX13AQ9BXU3 409 aaPredicted RBP16.23■□□□□ 0.19
TFAM-204ENST00000487519 TAF3Q5VWG9 929 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 GDPD2Q9HCC8 539 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 TFIP11Q9UBB9 837 aaKnown RBP16.22■□□□□ 0.19
TFAM-204ENST00000487519 FAM135AQ9P2D6 1515 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 LIG1P18858 919 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 SSFA2P28290 1259 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 RAB34Q9BZG1 259 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 ANO10Q9NW15 660 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 LRPPRCP42704 1394 aaKnown RBP16.22■□□□□ 0.19
TFAM-204ENST00000487519 TMEM266Q2M3C6 531 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 CADPS2Q86UW7 1296 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 ABCA10Q8WWZ4 1543 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 SNRPA1P09661 255 aaKnown RBP16.22■□□□□ 0.19
TFAM-204ENST00000487519 RFC4P35249 363 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 CACNA2D4Q7Z3S7 1137 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 PANK2Q9BZ23 570 aa16.22■□□□□ 0.19
TFAM-204ENST00000487519 PPP4R3AQ6IN85 833 aa16.21■□□□□ 0.19
TFAM-204ENST00000487519 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
TFAM-204ENST00000487519 TSPY2A6NKD2 308 aa16.21■□□□□ 0.19
TFAM-204ENST00000487519 WDHD1O75717 1129 aaPredicted RBP16.21■□□□□ 0.19
TFAM-204ENST00000487519 ZRSR2Q15696 482 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms