RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 SRCAPQ6ZRS2 3230 aa7.74□□□□□ -1.17
VAMP3-203ENST00000487194 F6X3S4 739 aa7.74□□□□□ -1.17
VAMP3-203ENST00000487194 GNAI3P08754 354 aa7.74□□□□□ -1.17
VAMP3-203ENST00000487194 KSR2Q6VAB6 950 aa7.74□□□□□ -1.17
VAMP3-203ENST00000487194 RPAP2Q8IXW5 612 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-203ENST00000487194 VSIG10Q8N0Z9 540 aa7.74□□□□□ -1.17
VAMP3-203ENST00000487194 DNAAF4Q8WXU2 420 aa7.74□□□□□ -1.17
VAMP3-203ENST00000487194 PHAXQ9H814 394 aaKnown RBP7.74□□□□□ -1.17
VAMP3-203ENST00000487194 USP21Q9UK80 565 aa7.74□□□□□ -1.17
VAMP3-203ENST00000487194 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.74□□□□□ -1.17
VAMP3-203ENST00000487194 PAPPAQ13219 1627 aa7.74□□□□□ -1.17
VAMP3-203ENST00000487194 ATP10DQ9P241 1426 aa7.73□□□□□ -1.17
VAMP3-203ENST00000487194 PRAMEF22A3QJZ6 481 aa7.73□□□□□ -1.17
VAMP3-203ENST00000487194 PIGBQ92521 554 aa7.73□□□□□ -1.17
VAMP3-203ENST00000487194 GCC1Q96CN9 775 aa7.73□□□□□ -1.17
VAMP3-203ENST00000487194 SRCIN1Q9C0H9 1055 aa7.73□□□□□ -1.17
VAMP3-203ENST00000487194 HDAC5Q9UQL6 1122 aa7.73□□□□□ -1.17
VAMP3-203ENST00000487194 UBR2Q8IWV8 1755 aa7.73□□□□□ -1.17
VAMP3-203ENST00000487194 KCPQ6ZWJ8 1503 aa7.73□□□□□ -1.17
VAMP3-203ENST00000487194 IBTKQ9P2D0 1353 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-203ENST00000487194 TOGARAM1Q9Y4F4 1720 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 N4BP2Q86UW6 1770 aaPredicted RBP7.72□□□□□ -1.17
VAMP3-203ENST00000487194 BCL9O00512 1426 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 PI4KAP2A4QPH2 592 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 HMMRO75330 724 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 ALDH1L1O75891 902 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 GNAI2P04899 355 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 PDIA6Q15084 440 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 PROSER3Q2NL68 480 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 SMC5Q8IY18 1101 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 PI4KAP1Q8N8J0 262 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 MEIS3Q99687 375 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 ATG3Q9NT62 314 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 USP16Q9Y5T5 823 aa7.72□□□□□ -1.17
VAMP3-203ENST00000487194 LAMB4A4D0S4 1761 aa7.71□□□□□ -1.17
VAMP3-203ENST00000487194 C5P01031 1676 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 PTCD1O75127 700 aaKnown RBP7.71□□□□□ -1.18
VAMP3-203ENST00000487194 STARD3NLO95772 234 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 ANXA1P04083 346 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 NEXNQ0ZGT2 675 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 FAM98CQ17RN3 349 aaKnown RBP7.71□□□□□ -1.18
VAMP3-203ENST00000487194 BEND3Q5T5X7 828 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 ANKRD44Q8N8A2 993 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 MARCH10Q8NA82 808 aaPredicted RBP7.71□□□□□ -1.18
VAMP3-203ENST00000487194 SYTL4Q96C24 671 aaPredicted RBP7.71□□□□□ -1.18
VAMP3-203ENST00000487194 C1orf115Q9H7X2 142 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 TRPC5Q9UL62 973 aaPredicted RBP7.71□□□□□ -1.18
VAMP3-203ENST00000487194 MAP3K2Q9Y2U5 619 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 AFF2P51816 1311 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 GLI3P10071 1580 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 ITGB4P16144 1822 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 ADCY9O60503 1353 aa7.71□□□□□ -1.18
VAMP3-203ENST00000487194 UBTFL1P0CB47 393 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-203ENST00000487194 MYL6BP14649 208 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 PRIM1P49642 420 aaKnown RBP7.7□□□□□ -1.18
VAMP3-203ENST00000487194 CEP85Q6P2H3 762 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 ANKRD13DQ6ZTN6 518 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 COPS6Q7L5N1 327 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 RIC3Q7Z5B4 369 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 LINS1Q8NG48 757 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 XAGE3Q8WTP9 111 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 SMARCC1Q92922 1105 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-203ENST00000487194 GJD4Q96KN9 370 aaPredicted RBP7.7□□□□□ -1.18
VAMP3-203ENST00000487194 TSHZ2Q9NRE2 1034 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 ASAP1Q9ULH1 1129 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 PDZRN3Q9UPQ7 1066 aa7.7□□□□□ -1.18
VAMP3-203ENST00000487194 A0A0G2JS52 829 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 MYT1Q01538 1121 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 NUCB1Q02818 461 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 AIMP1Q12904 312 aaKnown RBP7.69□□□□□ -1.18
VAMP3-203ENST00000487194 LRP10Q7Z4F1 713 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 SIRT2Q8IXJ6 389 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 PLBD2Q8NHP8 589 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 RBM42Q9BTD8 480 aaKnown RBP7.69□□□□□ -1.18
VAMP3-203ENST00000487194 METTL22Q9BUU2 404 aaPredicted RBP7.69□□□□□ -1.18
VAMP3-203ENST00000487194 USP44Q9H0E7 712 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 DCTPP1Q9H773 170 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 ZBTB47Q9UFB7 747 aaPredicted RBP7.69□□□□□ -1.18
VAMP3-203ENST00000487194 DOT1LQ8TEK3 1739 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 KAT6BQ8WYB5 2073 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 ATRNO75882 1429 aa7.69□□□□□ -1.18
VAMP3-203ENST00000487194 THSD7AQ9UPZ6 1657 aa7.68□□□□□ -1.18
VAMP3-203ENST00000487194 NBPF26B4DH59 902 aa7.68□□□□□ -1.18
VAMP3-203ENST00000487194 ONECUT3O60422 494 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-203ENST00000487194 A1BGP04217 495 aa7.68□□□□□ -1.18
VAMP3-203ENST00000487194 RGS3P49796 1198 aa7.68□□□□□ -1.18
VAMP3-203ENST00000487194 ATP8B2P98198 1209 aa7.68□□□□□ -1.18
VAMP3-203ENST00000487194 NBPF14Q5TI25 921 aa7.68□□□□□ -1.18
VAMP3-203ENST00000487194 NBPF10Q6P3W6 841 aaKnown RBP7.68□□□□□ -1.18
VAMP3-203ENST00000487194 DNAJC10Q8IXB1 793 aa7.68□□□□□ -1.18
VAMP3-203ENST00000487194 NBPF15Q8N660 670 aa7.68□□□□□ -1.18
VAMP3-203ENST00000487194 C9orf78Q9NZ63 289 aaPredicted RBP7.68□□□□□ -1.18
VAMP3-203ENST00000487194 NPM2Q86SE8 214 aaKnown RBP7.67□□□□□ -1.18
VAMP3-203ENST00000487194 CHD1LQ86WJ1 897 aa7.67□□□□□ -1.18
VAMP3-203ENST00000487194 ACSBG1Q96GR2 724 aa7.67□□□□□ -1.18
VAMP3-203ENST00000487194 MYD88Q99836 296 aa7.67□□□□□ -1.18
VAMP3-203ENST00000487194 LRRFIP2Q9Y608 721 aaKnown RBP7.67□□□□□ -1.18
VAMP3-203ENST00000487194 UTYO14607 1347 aa7.67□□□□□ -1.18
VAMP3-203ENST00000487194 NEURL1BA8MQ27 555 aa7.66□□□□□ -1.18
VAMP3-203ENST00000487194 GRM8O00222 908 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms