RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 HSPA1AP0DMV8 641 aaKnown RBP20.56■□□□□ 0.88
PFDN4-204ENST00000487129 HSPA1BP0DMV9 641 aaKnown RBP20.56■□□□□ 0.88
PFDN4-204ENST00000487129 NFIXQ14938 502 aa20.56■□□□□ 0.88
PFDN4-204ENST00000487129 BCL2L12Q9HB09 334 aa20.56■□□□□ 0.88
PFDN4-204ENST00000487129 POTECB2RU33 542 aa20.55■□□□□ 0.88
PFDN4-204ENST00000487129 LMNB1P20700 586 aa20.55■□□□□ 0.88
PFDN4-204ENST00000487129 TIAM2Q8IVF5 1701 aa20.55■□□□□ 0.88
PFDN4-204ENST00000487129 MRC1P22897 1456 aa20.55■□□□□ 0.88
PFDN4-204ENST00000487129 NFKBIEO00221 500 aa20.54■□□□□ 0.88
PFDN4-204ENST00000487129 VEGFAP15692 232 aaPredicted RBP20.54■□□□□ 0.88
PFDN4-204ENST00000487129 C1orf141Q5JVX7 400 aa20.54■□□□□ 0.88
PFDN4-204ENST00000487129 CARMIL3Q8ND23 1372 aa20.54■□□□□ 0.88
PFDN4-204ENST00000487129 CYP19A1P11511 503 aaPredicted RBP20.53■□□□□ 0.88
PFDN4-204ENST00000487129 COL15A1P39059 1388 aa20.52■□□□□ 0.88
PFDN4-204ENST00000487129 ZPR1O75312 459 aa20.52■□□□□ 0.88
PFDN4-204ENST00000487129 NARFQ9UHQ1 456 aa20.52■□□□□ 0.88
PFDN4-204ENST00000487129 SULT6B1Q6IMI4 303 aa20.51■□□□□ 0.87
PFDN4-204ENST00000487129 SLC52A2Q9HAB3 445 aa20.51■□□□□ 0.87
PFDN4-204ENST00000487129 ZBTB1Q9Y2K1 713 aa20.51■□□□□ 0.87
PFDN4-204ENST00000487129 LGR6Q9HBX8 967 aa20.5■□□□□ 0.87
PFDN4-204ENST00000487129 SERPINB2P05120 415 aa20.49■□□□□ 0.87
PFDN4-204ENST00000487129 IL13P35225 146 aa20.49■□□□□ 0.87
PFDN4-204ENST00000487129 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
PFDN4-204ENST00000487129 SLC39A6Q13433 755 aa20.48■□□□□ 0.87
PFDN4-204ENST00000487129 AKAP4Q5JQC9 854 aa20.47■□□□□ 0.87
PFDN4-204ENST00000487129 PANK3Q9H999 370 aa20.47■□□□□ 0.87
PFDN4-204ENST00000487129 CCDC88AQ3V6T2 1871 aa20.47■□□□□ 0.87
PFDN4-204ENST00000487129 ANKRD31Q8N7Z5 1873 aa20.46■□□□□ 0.87
PFDN4-204ENST00000487129 C2CD5Q86YS7 1000 aa20.46■□□□□ 0.87
PFDN4-204ENST00000487129 POLR3GLQ9BT43 218 aa20.46■□□□□ 0.87
PFDN4-204ENST00000487129 COL11A2P13942 1736 aaPredicted RBP20.44■□□□□ 0.86
PFDN4-204ENST00000487129 UBR2Q8IWV8 1755 aa20.44■□□□□ 0.86
PFDN4-204ENST00000487129 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
PFDN4-204ENST00000487129 FER1L6Q2WGJ9 1857 aa20.43■□□□□ 0.86
PFDN4-204ENST00000487129 H0YIN7 160 aa20.42■□□□□ 0.86
PFDN4-204ENST00000487129 POTEIP0CG38 1075 aa20.42■□□□□ 0.86
PFDN4-204ENST00000487129 POTEJP0CG39 1038 aa20.42■□□□□ 0.86
PFDN4-204ENST00000487129 VSIG10Q8N0Z9 540 aa20.42■□□□□ 0.86
PFDN4-204ENST00000487129 EIF5P55010 431 aaKnown RBP20.41■□□□□ 0.86
PFDN4-204ENST00000487129 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
PFDN4-204ENST00000487129 CREBZFQ9NS37 354 aa20.41■□□□□ 0.86
PFDN4-204ENST00000487129 SCN7AQ01118 1682 aa20.41■□□□□ 0.86
PFDN4-204ENST00000487129 VIRMAQ69YN4 1812 aaKnown RBP20.41■□□□□ 0.86
PFDN4-204ENST00000487129 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
PFDN4-204ENST00000487129 LTBP3Q9NS15 1303 aa20.39■□□□□ 0.85
PFDN4-204ENST00000487129 C21orf2O43822 256 aa20.39■□□□□ 0.85
PFDN4-204ENST00000487129 TBC1D9BQ66K14 1250 aa20.39■□□□□ 0.85
PFDN4-204ENST00000487129 TIMELESSQ9UNS1 1208 aa20.39■□□□□ 0.85
PFDN4-204ENST00000487129 CANXP27824 592 aaKnown RBP20.38■□□□□ 0.85
PFDN4-204ENST00000487129 ERFEQ4G0M1 354 aa20.38■□□□□ 0.85
PFDN4-204ENST00000487129 PRR5LQ6MZQ0 368 aa20.38■□□□□ 0.85
PFDN4-204ENST00000487129 CHADLQ6NUI6 762 aa20.38■□□□□ 0.85
PFDN4-204ENST00000487129 DPY19L2Q6NUT2 758 aa20.38■□□□□ 0.85
PFDN4-204ENST00000487129 BICDL1Q6ZP65 573 aa20.38■□□□□ 0.85
PFDN4-204ENST00000487129 BRIP1Q9BX63 1249 aa20.38■□□□□ 0.85
PFDN4-204ENST00000487129 MKRN1Q9UHC7 482 aaKnown RBP20.38■□□□□ 0.85
PFDN4-204ENST00000487129 MTHFSDQ2M296 383 aaKnown RBP20.37■□□□□ 0.85
PFDN4-204ENST00000487129 FOXN1O15353 648 aa20.36■□□□□ 0.85
PFDN4-204ENST00000487129 DDNO94850 711 aaPredicted RBP20.36■□□□□ 0.85
PFDN4-204ENST00000487129 CCDC24Q8N4L8 307 aa20.36■□□□□ 0.85
PFDN4-204ENST00000487129 CNTNAP1P78357 1384 aa20.35■□□□□ 0.85
PFDN4-204ENST00000487129 PASKQ96RG2 1323 aa20.35■□□□□ 0.85
PFDN4-204ENST00000487129 HMOX1P09601 288 aa20.35■□□□□ 0.85
PFDN4-204ENST00000487129 HSPA5P11021 654 aaKnown RBP20.35■□□□□ 0.85
PFDN4-204ENST00000487129 ZNF622Q969S3 477 aaKnown RBP eCLIP20.35■□□□□ 0.851e-12■□□□□ 11.2
PFDN4-204ENST00000487129 ZNF219Q9P2Y4 722 aaPredicted RBP20.35■□□□□ 0.85
PFDN4-204ENST00000487129 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
PFDN4-204ENST00000487129 PDZRN3Q9UPQ7 1066 aa20.34■□□□□ 0.85
PFDN4-204ENST00000487129 SLX4Q8IY92 1834 aa20.34■□□□□ 0.85
PFDN4-204ENST00000487129 PDE6BP35913 854 aa20.33■□□□□ 0.85
PFDN4-204ENST00000487129 ZNF496Q96IT1 587 aaPredicted RBP20.33■□□□□ 0.85
PFDN4-204ENST00000487129 TAOK3Q9H2K8 898 aa20.33■□□□□ 0.85
PFDN4-204ENST00000487129 ARFGEF2Q9Y6D5 1785 aa20.31■□□□□ 0.84
PFDN4-204ENST00000487129 A0A087WZG4 1122 aa20.31■□□□□ 0.84
PFDN4-204ENST00000487129 STARD3NLO95772 234 aa20.31■□□□□ 0.84
PFDN4-204ENST00000487129 SRGNP10124 158 aa20.31■□□□□ 0.84
PFDN4-204ENST00000487129 L3MBTL3Q96JM7 780 aaPredicted RBP20.31■□□□□ 0.84
PFDN4-204ENST00000487129 TBC1D2BQ9UPU7 963 aa20.31■□□□□ 0.84
PFDN4-204ENST00000487129 HEG1Q9ULI3 1381 aa20.31■□□□□ 0.84
PFDN4-204ENST00000487129 EIF4G2P78344 907 aaKnown RBP eCLIP20.3■□□□□ 0.84
PFDN4-204ENST00000487129 PRPF40BQ6NWY9 871 aaKnown RBP20.3■□□□□ 0.84
PFDN4-204ENST00000487129 C7orf43Q8WVR3 580 aa20.3■□□□□ 0.84
PFDN4-204ENST00000487129 PRDM10Q9NQV6 1147 aa20.3■□□□□ 0.84
PFDN4-204ENST00000487129 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
PFDN4-204ENST00000487129 ADAMTSL1Q8N6G6 1762 aa20.29■□□□□ 0.84
PFDN4-204ENST00000487129 CAMTA2O94983 1202 aa20.29■□□□□ 0.84
PFDN4-204ENST00000487129 STYK1Q6J9G0 422 aa20.29■□□□□ 0.84
PFDN4-204ENST00000487129 TAF1DQ9H5J8 278 aaPredicted RBP20.29■□□□□ 0.84
PFDN4-204ENST00000487129 ITGBL1O95965 494 aaPredicted RBP20.28■□□□□ 0.84
PFDN4-204ENST00000487129 IL6STP40189 918 aaPredicted RBP20.28■□□□□ 0.84
PFDN4-204ENST00000487129 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
PFDN4-204ENST00000487129 LDHDQ86WU2 507 aa20.28■□□□□ 0.84
PFDN4-204ENST00000487129 IL17REQ8NFR9 667 aa20.28■□□□□ 0.84
PFDN4-204ENST00000487129 CNKSR1Q969H4 720 aa20.28■□□□□ 0.84
PFDN4-204ENST00000487129 KNSTRNQ9Y448 316 aa20.28■□□□□ 0.84
PFDN4-204ENST00000487129 BCORQ6W2J9 1755 aa20.28■□□□□ 0.84
PFDN4-204ENST00000487129 VEGFBP49765 207 aa20.27■□□□□ 0.84
PFDN4-204ENST00000487129 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
PFDN4-204ENST00000487129 CNBD1Q8NA66 436 aa20.27■□□□□ 0.84
PFDN4-204ENST00000487129 SCN4AP35499 1836 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms