RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 BTBD11A6QL63 1104 aa25.41■■□□□ 1.66
CLIP2-206ENST00000487091 USPL1Q5W0Q7 1092 aa25.41■■□□□ 1.66
CLIP2-206ENST00000487091 NARFQ9UHQ1 456 aa25.41■■□□□ 1.66
CLIP2-206ENST00000487091 COL15A1P39059 1388 aa25.41■■□□□ 1.66
CLIP2-206ENST00000487091 PXDNLA1KZ92 1463 aa25.4■■□□□ 1.66
CLIP2-206ENST00000487091 TM4SF1P30408 202 aa25.4■■□□□ 1.66
CLIP2-206ENST00000487091 RALBP1Q15311 655 aa25.39■■□□□ 1.66
CLIP2-206ENST00000487091 KIAA1551Q9HCM1 1747 aa25.38■■□□□ 1.65
CLIP2-206ENST00000487091 NEFMP07197 916 aa25.38■■□□□ 1.65
CLIP2-206ENST00000487091 CANXP27824 592 aaKnown RBP25.38■■□□□ 1.65
CLIP2-206ENST00000487091 EIF5P55010 431 aaKnown RBP25.38■■□□□ 1.65
CLIP2-206ENST00000487091 DDR1Q08345 913 aa25.38■■□□□ 1.65
CLIP2-206ENST00000487091 MCM10Q7L590 875 aa25.38■■□□□ 1.65
CLIP2-206ENST00000487091 N4BP2Q86UW6 1770 aaPredicted RBP25.36■■□□□ 1.65
CLIP2-206ENST00000487091 A0A087WZG4 1122 aa25.36■■□□□ 1.65
CLIP2-206ENST00000487091 A0A0G2JLW4 131 aa25.36■■□□□ 1.65
CLIP2-206ENST00000487091 POLRMTO00411 1230 aaKnown RBP25.36■■□□□ 1.65
CLIP2-206ENST00000487091 KCNQ3O43525 872 aa25.36■■□□□ 1.65
CLIP2-206ENST00000487091 DDX10Q13206 875 aaKnown RBP25.36■■□□□ 1.65
CLIP2-206ENST00000487091 PNNQ9H307 717 aaKnown RBP25.36■■□□□ 1.65
CLIP2-206ENST00000487091 WWC3Q9ULE0 1092 aa25.36■■□□□ 1.65
CLIP2-206ENST00000487091 PLEKHF1Q96S99 279 aa25.35■■□□□ 1.65
CLIP2-206ENST00000487091 DPEP1P16444 411 aa25.34■■□□□ 1.65
CLIP2-206ENST00000487091 IL6STP40189 918 aaPredicted RBP25.33■■□□□ 1.65
CLIP2-206ENST00000487091 DCTN1Q14203 1278 aa25.33■■□□□ 1.65
CLIP2-206ENST00000487091 NFIXQ14938 502 aa25.33■■□□□ 1.65
CLIP2-206ENST00000487091 BCL2L12Q9HB09 334 aa25.33■■□□□ 1.65
CLIP2-206ENST00000487091 KCNA3P22001 575 aa25.31■■□□□ 1.64
CLIP2-206ENST00000487091 TAF7Q15545 349 aaPredicted RBP25.31■■□□□ 1.64
CLIP2-206ENST00000487091 A1BGP04217 495 aa25.3■■□□□ 1.64
CLIP2-206ENST00000487091 SNRPA1P09661 255 aaKnown RBP25.3■■□□□ 1.64
CLIP2-206ENST00000487091 BCS1LQ9Y276 419 aa25.3■■□□□ 1.64
CLIP2-206ENST00000487091 BRCA1P38398 1863 aaKnown RBP25.3■■□□□ 1.64
CLIP2-206ENST00000487091 DLG5Q8TDM6 1919 aa25.29■■□□□ 1.64
CLIP2-206ENST00000487091 NFE2L2Q16236 605 aa25.29■■□□□ 1.64
CLIP2-206ENST00000487091 USP16Q9Y5T5 823 aa25.29■■□□□ 1.64
CLIP2-206ENST00000487091 NPM2Q86SE8 214 aaKnown RBP25.28■■□□□ 1.64
CLIP2-206ENST00000487091 PIM2Q9P1W9 311 aa25.28■■□□□ 1.64
CLIP2-206ENST00000487091 NRXN2Q9P2S2 1712 aa25.27■■□□□ 1.64
CLIP2-206ENST00000487091 AFDNP55196 1824 aaKnown RBP25.27■■□□□ 1.64
CLIP2-206ENST00000487091 MAPK8IP3Q9UPT6 1336 aa25.27■■□□□ 1.64
CLIP2-206ENST00000487091 SERPINB2P05120 415 aa25.26■■□□□ 1.63
CLIP2-206ENST00000487091 PNISRQ8TF01 805 aaKnown RBP25.26■■□□□ 1.63
CLIP2-206ENST00000487091 TBC1D2BQ9UPU7 963 aa25.26■■□□□ 1.63
CLIP2-206ENST00000487091 MYBBP1AQ9BQG0 1328 aaKnown RBP25.26■■□□□ 1.63
CLIP2-206ENST00000487091 ADCY9O60503 1353 aa25.26■■□□□ 1.63
CLIP2-206ENST00000487091 ZNF330Q9Y3S2 320 aaPredicted RBP25.25■■□□□ 1.63
CLIP2-206ENST00000487091 ATP10DQ9P241 1426 aa25.24■■□□□ 1.63
CLIP2-206ENST00000487091 PRAMEF22A3QJZ6 481 aa25.24■■□□□ 1.63
CLIP2-206ENST00000487091 ARFGEF1Q9Y6D6 1849 aa25.23■■□□□ 1.63
CLIP2-206ENST00000487091 SCN7AQ01118 1682 aa25.23■■□□□ 1.63
CLIP2-206ENST00000487091 CHRNA5P30532 468 aa25.22■■□□□ 1.63
CLIP2-206ENST00000487091 DALRD3Q5D0E6 543 aaKnown RBP25.22■■□□□ 1.63
CLIP2-206ENST00000487091 TBC1D9BQ66K14 1250 aa25.22■■□□□ 1.63
CLIP2-206ENST00000487091 ARHGAP27Q6ZUM4 889 aa25.22■■□□□ 1.63
CLIP2-206ENST00000487091 GIGYF1O75420 1035 aaPredicted RBP25.21■■□□□ 1.63
CLIP2-206ENST00000487091 CAMTA2O94983 1202 aa25.21■■□□□ 1.63
CLIP2-206ENST00000487091 BICDL1Q6ZP65 573 aa25.21■■□□□ 1.63
CLIP2-206ENST00000487091 DZIP3Q86Y13 1208 aaKnown RBP25.21■■□□□ 1.63
CLIP2-206ENST00000487091 MIS18AQ9NYP9 233 aa25.21■■□□□ 1.63
CLIP2-206ENST00000487091 C1QTNF8P60827 252 aa25.2■■□□□ 1.62
CLIP2-206ENST00000487091 KDM3BQ7LBC6 1761 aa25.18■■□□□ 1.62
CLIP2-206ENST00000487091 PIP4K2AP48426 406 aaPredicted RBP25.18■■□□□ 1.62
CLIP2-206ENST00000487091 THUMPD2Q9BTF0 503 aaKnown RBP25.18■■□□□ 1.62
CLIP2-206ENST00000487091 CARMIL3Q8ND23 1372 aa25.18■■□□□ 1.62
CLIP2-206ENST00000487091 NBPF26B4DH59 902 aa25.17■■□□□ 1.62
CLIP2-206ENST00000487091 NBPF10Q6P3W6 841 aaKnown RBP25.17■■□□□ 1.62
CLIP2-206ENST00000487091 CLEC4GQ6UXB4 293 aa25.17■■□□□ 1.62
CLIP2-206ENST00000487091 NBPF15Q8N660 670 aa25.17■■□□□ 1.62
CLIP2-206ENST00000487091 SETDB2Q96T68 719 aa25.17■■□□□ 1.62
CLIP2-206ENST00000487091 GPBP1L1Q9HC44 474 aaPredicted RBP25.17■■□□□ 1.62
CLIP2-206ENST00000487091 BCORQ6W2J9 1755 aa25.16■■□□□ 1.62
CLIP2-206ENST00000487091 RGL2O15211 777 aa25.16■■□□□ 1.62
CLIP2-206ENST00000487091 RIPK4P57078 832 aa25.16■■□□□ 1.62
CLIP2-206ENST00000487091 EIF4A1P60842 406 aaKnown RBP25.16■■□□□ 1.62
CLIP2-206ENST00000487091 PDZRN3Q9UPQ7 1066 aa25.16■■□□□ 1.62
CLIP2-206ENST00000487091 TMPOP42166 694 aaKnown RBP25.15■■□□□ 1.62
CLIP2-206ENST00000487091 BRIP1Q9BX63 1249 aa25.15■■□□□ 1.62
CLIP2-206ENST00000487091 H0YIN7 160 aa25.14■■□□□ 1.62
CLIP2-206ENST00000487091 LMOD3Q0VAK6 560 aa25.14■■□□□ 1.62
CLIP2-206ENST00000487091 PRR5LQ6MZQ0 368 aa25.14■■□□□ 1.62
CLIP2-206ENST00000487091 C2CD5Q86YS7 1000 aa25.14■■□□□ 1.62
CLIP2-206ENST00000487091 PRKRIP1Q9H875 184 aaPredicted RBP25.14■■□□□ 1.62
CLIP2-206ENST00000487091 ZNF652Q9Y2D9 606 aa25.14■■□□□ 1.62
CLIP2-206ENST00000487091 LAMB4A4D0S4 1761 aa25.13■■□□□ 1.61
CLIP2-206ENST00000487091 DLEC1Q9Y238 1755 aa25.13■■□□□ 1.61
CLIP2-206ENST00000487091 PDE6BP35913 854 aa25.12■■□□□ 1.61
CLIP2-206ENST00000487091 WDR43Q15061 677 aaKnown RBP eCLIP25.12■■□□□ 1.61
CLIP2-206ENST00000487091 TTLL6Q8N841 843 aa25.12■■□□□ 1.61
CLIP2-206ENST00000487091 ZNF526Q8TF50 670 aaPredicted RBP25.12■■□□□ 1.61
CLIP2-206ENST00000487091 BABAM1Q9NWV8 329 aa25.12■■□□□ 1.61
CLIP2-206ENST00000487091 ZEB1P37275 1124 aaPredicted RBP25.11■■□□□ 1.61
CLIP2-206ENST00000487091 CNBD1Q8NA66 436 aa25.1■■□□□ 1.61
CLIP2-206ENST00000487091 TSPYL4Q9UJ04 414 aa25.1■■□□□ 1.61
CLIP2-206ENST00000487091 ANKRD31Q8N7Z5 1873 aa25.1■■□□□ 1.61
CLIP2-206ENST00000487091 RUNDC1Q96C34 613 aa25.09■■□□□ 1.61
CLIP2-206ENST00000487091 NPHP1O15259 732 aa25.08■■□□□ 1.61
CLIP2-206ENST00000487091 ST5P78524 1137 aa25.08■■□□□ 1.61
CLIP2-206ENST00000487091 C9orf131Q5VYM1 1079 aa25.08■■□□□ 1.61
CLIP2-206ENST00000487091 CCDC146Q8IYE0 955 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms