RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 ZNF784Q8NCA9 323 aaPredicted RBP29.19■■■□□ 2.26
HLA-F-228ENST00000486194 FKBP8Q14318 412 aa29.18■■■□□ 2.26
HLA-F-228ENST00000486194 C10orf71Q711Q0 1435 aa29.18■■■□□ 2.26
HLA-F-228ENST00000486194 MCM10Q7L590 875 aa29.17■■■□□ 2.26
HLA-F-228ENST00000486194 NARFQ9UHQ1 456 aa29.17■■■□□ 2.26
HLA-F-228ENST00000486194 CANXP27824 592 aaKnown RBP29.16■■■□□ 2.26
HLA-F-228ENST00000486194 USPL1Q5W0Q7 1092 aa29.16■■■□□ 2.26
HLA-F-228ENST00000486194 A0A087WZG4 1122 aa29.15■■■□□ 2.26
HLA-F-228ENST00000486194 UTRNP46939 3433 aa29.15■■■□□ 2.26
HLA-F-228ENST00000486194 KIF13BQ9NQT8 1826 aa29.14■■■□□ 2.26
HLA-F-228ENST00000486194 PXDNLA1KZ92 1463 aa29.13■■■□□ 2.25
HLA-F-228ENST00000486194 TM4SF1P30408 202 aa29.12■■■□□ 2.25
HLA-F-228ENST00000486194 EIF5P55010 431 aaKnown RBP29.12■■■□□ 2.25
HLA-F-228ENST00000486194 NPM2Q86SE8 214 aaKnown RBP29.12■■■□□ 2.25
HLA-F-228ENST00000486194 MAPK8IP3Q9UPT6 1336 aa29.12■■■□□ 2.25
HLA-F-228ENST00000486194 DDR1Q08345 913 aa29.11■■■□□ 2.25
HLA-F-228ENST00000486194 PLEKHF1Q96S99 279 aa29.11■■■□□ 2.25
HLA-F-228ENST00000486194 DCTN1Q14203 1278 aa29.1■■■□□ 2.25
HLA-F-228ENST00000486194 MYBBP1AQ9BQG0 1328 aaKnown RBP29.1■■■□□ 2.25
HLA-F-228ENST00000486194 POLRMTO00411 1230 aaKnown RBP29.09■■■□□ 2.25
HLA-F-228ENST00000486194 KCNQ3O43525 872 aa29.09■■■□□ 2.25
HLA-F-228ENST00000486194 IL6STP40189 918 aaPredicted RBP29.09■■■□□ 2.25
HLA-F-228ENST00000486194 TAF7Q15545 349 aaPredicted RBP29.09■■■□□ 2.25
HLA-F-228ENST00000486194 WWC3Q9ULE0 1092 aa29.09■■■□□ 2.25
HLA-F-228ENST00000486194 A0A0G2JLW4 131 aa29.08■■■□□ 2.25
HLA-F-228ENST00000486194 SNRPA1P09661 255 aaKnown RBP29.08■■■□□ 2.25
HLA-F-228ENST00000486194 NFE2L2Q16236 605 aa29.08■■■□□ 2.25
HLA-F-228ENST00000486194 DPEP1P16444 411 aa29.06■■■□□ 2.24
HLA-F-228ENST00000486194 NFIXQ14938 502 aa29.06■■■□□ 2.24
HLA-F-228ENST00000486194 PNISRQ8TF01 805 aaKnown RBP29.06■■■□□ 2.24
HLA-F-228ENST00000486194 ZNF330Q9Y3S2 320 aaPredicted RBP29.05■■■□□ 2.24
HLA-F-228ENST00000486194 KIAA1551Q9HCM1 1747 aa29.04■■■□□ 2.24
HLA-F-228ENST00000486194 A1BGP04217 495 aa29.04■■■□□ 2.24
HLA-F-228ENST00000486194 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
HLA-F-228ENST00000486194 BCL2L12Q9HB09 334 aa29.04■■■□□ 2.24
HLA-F-228ENST00000486194 BCS1LQ9Y276 419 aa29.04■■■□□ 2.24
HLA-F-228ENST00000486194 GOLGB1Q14789 3259 aaKnown RBP29.03■■■□□ 2.24
HLA-F-228ENST00000486194 PIM2Q9P1W9 311 aa29.02■■■□□ 2.24
HLA-F-228ENST00000486194 USP16Q9Y5T5 823 aa29.02■■■□□ 2.24
HLA-F-228ENST00000486194 N4BP2Q86UW6 1770 aaPredicted RBP29.02■■■□□ 2.24
HLA-F-228ENST00000486194 SERPINB2P05120 415 aa29■■■□□ 2.23
HLA-F-228ENST00000486194 TBC1D2BQ9UPU7 963 aa28.99■■■□□ 2.23
HLA-F-228ENST00000486194 KCNA3P22001 575 aa28.98■■■□□ 2.23
HLA-F-228ENST00000486194 DLG5Q8TDM6 1919 aa28.96■■■□□ 2.23
HLA-F-228ENST00000486194 PRAMEF22A3QJZ6 481 aa28.96■■■□□ 2.23
HLA-F-228ENST00000486194 LMOD3Q0VAK6 560 aa28.96■■■□□ 2.23
HLA-F-228ENST00000486194 DALRD3Q5D0E6 543 aaKnown RBP28.96■■■□□ 2.23
HLA-F-228ENST00000486194 BICDL1Q6ZP65 573 aa28.96■■■□□ 2.23
HLA-F-228ENST00000486194 DZIP3Q86Y13 1208 aaKnown RBP28.96■■■□□ 2.23
HLA-F-228ENST00000486194 MIS18AQ9NYP9 233 aa28.96■■■□□ 2.23
HLA-F-228ENST00000486194 SCN7AQ01118 1682 aa28.96■■■□□ 2.23
HLA-F-228ENST00000486194 WDR43Q15061 677 aaKnown RBP eCLIP28.95■■■□□ 2.22
HLA-F-228ENST00000486194 NRXN2Q9P2S2 1712 aa28.94■■■□□ 2.22
HLA-F-228ENST00000486194 CARMIL3Q8ND23 1372 aa28.94■■■□□ 2.22
HLA-F-228ENST00000486194 CAMTA2O94983 1202 aa28.94■■■□□ 2.22
HLA-F-228ENST00000486194 RIPK4P57078 832 aa28.94■■■□□ 2.22
HLA-F-228ENST00000486194 TBC1D9BQ66K14 1250 aa28.94■■■□□ 2.22
HLA-F-228ENST00000486194 ATP10DQ9P241 1426 aa28.94■■■□□ 2.22
HLA-F-228ENST00000486194 ADCY9O60503 1353 aa28.93■■■□□ 2.22
HLA-F-228ENST00000486194 CHRNA5P30532 468 aa28.93■■■□□ 2.22
HLA-F-228ENST00000486194 ARHGAP27Q6ZUM4 889 aa28.93■■■□□ 2.22
HLA-F-228ENST00000486194 PRKRIP1Q9H875 184 aaPredicted RBP28.93■■■□□ 2.22
HLA-F-228ENST00000486194 BRCA1P38398 1863 aaKnown RBP28.92■■■□□ 2.22
HLA-F-228ENST00000486194 GIGYF1O75420 1035 aaPredicted RBP28.92■■■□□ 2.22
HLA-F-228ENST00000486194 SETDB2Q96T68 719 aa28.92■■■□□ 2.22
HLA-F-228ENST00000486194 THUMPD2Q9BTF0 503 aaKnown RBP28.92■■■□□ 2.22
HLA-F-228ENST00000486194 ZNF652Q9Y2D9 606 aa28.92■■■□□ 2.22
HLA-F-228ENST00000486194 CLEC4GQ6UXB4 293 aa28.91■■■□□ 2.22
HLA-F-228ENST00000486194 AFDNP55196 1824 aaKnown RBP28.91■■■□□ 2.22
HLA-F-228ENST00000486194 RGL2O15211 777 aa28.9■■■□□ 2.22
HLA-F-228ENST00000486194 TMPOP42166 694 aaKnown RBP28.9■■■□□ 2.22
HLA-F-228ENST00000486194 PIP4K2AP48426 406 aaPredicted RBP28.9■■■□□ 2.22
HLA-F-228ENST00000486194 EIF4A1P60842 406 aaKnown RBP28.9■■■□□ 2.22
HLA-F-228ENST00000486194 PDZRN3Q9UPQ7 1066 aa28.9■■■□□ 2.22
HLA-F-228ENST00000486194 KDM3BQ7LBC6 1761 aa28.9■■■□□ 2.22
HLA-F-228ENST00000486194 BABAM1Q9NWV8 329 aa28.89■■■□□ 2.22
HLA-F-228ENST00000486194 H0YIN7 160 aa28.88■■■□□ 2.21
HLA-F-228ENST00000486194 NPHP1O15259 732 aa28.88■■■□□ 2.21
HLA-F-228ENST00000486194 RUNDC1Q96C34 613 aa28.88■■■□□ 2.21
HLA-F-228ENST00000486194 GPBP1L1Q9HC44 474 aaPredicted RBP28.88■■■□□ 2.21
HLA-F-228ENST00000486194 NBPF26B4DH59 902 aa28.87■■■□□ 2.21
HLA-F-228ENST00000486194 NBPF10Q6P3W6 841 aaKnown RBP28.87■■■□□ 2.21
HLA-F-228ENST00000486194 NBPF15Q8N660 670 aa28.87■■■□□ 2.21
HLA-F-228ENST00000486194 BRIP1Q9BX63 1249 aa28.87■■■□□ 2.21
HLA-F-228ENST00000486194 TSPYL4Q9UJ04 414 aa28.87■■■□□ 2.21
HLA-F-228ENST00000486194 ARFGEF1Q9Y6D6 1849 aa28.87■■■□□ 2.21
HLA-F-228ENST00000486194 PDE6BP35913 854 aa28.86■■■□□ 2.21
HLA-F-228ENST00000486194 C2CD5Q86YS7 1000 aa28.86■■■□□ 2.21
HLA-F-228ENST00000486194 LAMB4A4D0S4 1761 aa28.85■■■□□ 2.21
HLA-F-228ENST00000486194 BCORQ6W2J9 1755 aa28.85■■■□□ 2.21
HLA-F-228ENST00000486194 C1QTNF8P60827 252 aa28.85■■■□□ 2.21
HLA-F-228ENST00000486194 PRR5LQ6MZQ0 368 aa28.85■■■□□ 2.21
HLA-F-228ENST00000486194 CCDC146Q8IYE0 955 aa28.85■■■□□ 2.21
HLA-F-228ENST00000486194 CNBD1Q8NA66 436 aa28.85■■■□□ 2.21
HLA-F-228ENST00000486194 ST5P78524 1137 aa28.84■■■□□ 2.21
HLA-F-228ENST00000486194 TTLL6Q8N841 843 aa28.84■■■□□ 2.21
HLA-F-228ENST00000486194 ADAMTS8Q9UP79 889 aa28.83■■■□□ 2.21
HLA-F-228ENST00000486194 ERBB4Q15303 1308 aa28.81■■■□□ 2.2
HLA-F-228ENST00000486194 NEUROD2Q15784 382 aa28.81■■■□□ 2.2
HLA-F-228ENST00000486194 RRP7AQ9Y3A4 280 aaKnown RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms