RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-208	ENST00000485758	SLC15A2	Q16348	729 aa		14	□□□□□ -0.17
TPRKB-208	ENST00000485758	PLCD3	Q8N3E9	789 aa		14	□□□□□ -0.17
TPRKB-208	ENST00000485758	LGR6	Q9HBX8	967 aa		14	□□□□□ -0.17
TPRKB-208	ENST00000485758	ATG3	Q9NT62	314 aa		14	□□□□□ -0.17
TPRKB-208	ENST00000485758	UBR3	Q6ZT12	1888 aa		13.99	□□□□□ -0.17
TPRKB-208	ENST00000485758	TJP1	Q07157	1748 aa		13.99	□□□□□ -0.17
TPRKB-208	ENST00000485758	NFATC2IP	Q8NCF5	419 aa		13.99	□□□□□ -0.17
TPRKB-208	ENST00000485758	PLEKHF1	Q96S99	279 aa		13.99	□□□□□ -0.17
TPRKB-208	ENST00000485758	SLC52A2	Q9HAB3	445 aa		13.99	□□□□□ -0.17
TPRKB-208	ENST00000485758	SCUBE2	Q9NQ36	999 aa		13.99	□□□□□ -0.17
TPRKB-208	ENST00000485758	LOC102724428	A0A0B4J2F2	783 aa		13.98	□□□□□ -0.17
TPRKB-208	ENST00000485758	NEFM	P07197	916 aa		13.98	□□□□□ -0.17
TPRKB-208	ENST00000485758	SIK1	P57059	783 aa		13.98	□□□□□ -0.17
TPRKB-208	ENST00000485758	ZNF827	Q17R98	1081 aa		13.98	□□□□□ -0.17
TPRKB-208	ENST00000485758	PNN	Q9H307	717 aa	Known RBP	13.98	□□□□□ -0.17
TPRKB-208	ENST00000485758	CEMIP	Q8WUJ3	1361 aa		13.97	□□□□□ -0.17
TPRKB-208	ENST00000485758	ANP32C	O43423	234 aa		13.97	□□□□□ -0.17
TPRKB-208	ENST00000485758	IL17RE	Q8NFR9	667 aa		13.97	□□□□□ -0.17
TPRKB-208	ENST00000485758	MAPK8IP3	Q9UPT6	1336 aa		13.96	□□□□□ -0.17
TPRKB-208	ENST00000485758	KCP	Q6ZWJ8	1503 aa		13.96	□□□□□ -0.17
TPRKB-208	ENST00000485758	HMGB2	P26583	209 aa	Known RBP	13.96	□□□□□ -0.17
TPRKB-208	ENST00000485758	WDR43	Q15061	677 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
TPRKB-208	ENST00000485758	PCDHB13	Q9Y5F0	798 aa		13.96	□□□□□ -0.17
TPRKB-208	ENST00000485758	TEF	Q10587	303 aa		13.95	□□□□□ -0.18
TPRKB-208	ENST00000485758	IER5L	Q5T953	404 aa		13.95	□□□□□ -0.18
TPRKB-208	ENST00000485758	COL24A1	Q17RW2	1714 aa		13.95	□□□□□ -0.18
TPRKB-208	ENST00000485758	MYH14	Q7Z406	1995 aa	Known RBP	13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	KDM3B	Q7LBC6	1761 aa		13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	HTATSF1	O43719	755 aa	Known RBP	13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	ATP6V1A	P38606	617 aa		13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	ITPK1	Q13572	414 aa		13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	NFE2L2	Q16236	605 aa		13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	IFNL1	Q8IU54	200 aa		13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	RTF1	Q92541	710 aa	Known RBP	13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	SLC4A9	Q96Q91	983 aa		13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	TRIM35	Q9UPQ4	493 aa		13.94	□□□□□ -0.18
TPRKB-208	ENST00000485758	LINC00116	Q8NCU8	138 aa		13.93	□□□□□ -0.18
TPRKB-208	ENST00000485758	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.93	□□□□□ -0.18
TPRKB-208	ENST00000485758	TFCP2L1	Q9NZI6	479 aa		13.93	□□□□□ -0.18
TPRKB-208	ENST00000485758	PCDH10	Q9P2E7	1040 aa		13.93	□□□□□ -0.18
TPRKB-208	ENST00000485758	PNPLA7	Q6ZV29	1317 aa		13.92	□□□□□ -0.18
TPRKB-208	ENST00000485758	PTCD1	O75127	700 aa	Known RBP	13.92	□□□□□ -0.18
TPRKB-208	ENST00000485758	SLC39A6	Q13433	755 aa		13.92	□□□□□ -0.18
TPRKB-208	ENST00000485758	CCDC184	Q52MB2	194 aa		13.92	□□□□□ -0.18
TPRKB-208	ENST00000485758	MCM10	Q7L590	875 aa		13.92	□□□□□ -0.18
TPRKB-208	ENST00000485758	ADAMTS8	Q9UP79	889 aa		13.92	□□□□□ -0.18
TPRKB-208	ENST00000485758	C4A	P0C0L4	1744 aa		13.91	□□□□□ -0.18
TPRKB-208	ENST00000485758	DCTN1	Q14203	1278 aa		13.91	□□□□□ -0.18
TPRKB-208	ENST00000485758	RUNDC1	Q96C34	613 aa		13.91	□□□□□ -0.18
TPRKB-208	ENST00000485758	AK7	Q96M32	723 aa		13.91	□□□□□ -0.18
TPRKB-208	ENST00000485758	CCDC146	Q8IYE0	955 aa		13.9	□□□□□ -0.18
TPRKB-208	ENST00000485758	TTC5	Q8N0Z6	440 aa		13.9	□□□□□ -0.18
TPRKB-208	ENST00000485758	CNTNAP4	Q9C0A0	1308 aa		13.9	□□□□□ -0.19
TPRKB-208	ENST00000485758	TMPO	P42166	694 aa	Known RBP	13.89	□□□□□ -0.19
TPRKB-208	ENST00000485758	FKBP8	Q14318	412 aa		13.89	□□□□□ -0.19
TPRKB-208	ENST00000485758	ZNF790	Q6PG37	636 aa		13.89	□□□□□ -0.19
TPRKB-208	ENST00000485758	SPON1	Q9HCB6	807 aa		13.89	□□□□□ -0.19
TPRKB-208	ENST00000485758	LAMB4	A4D0S4	1761 aa		13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	SRCAP	Q6ZRS2	3230 aa		13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	BTBD11	A6QL63	1104 aa		13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	ZBTB7A	O95365	584 aa		13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	RC3H1	Q5TC82	1133 aa	Known RBP	13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	VSIG10	Q8N0Z9	540 aa		13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	FLAD1	Q8NFF5	587 aa		13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	SLC16A10	Q8TF71	515 aa		13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	MTFR1L	Q9H019	292 aa		13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	MRS2	Q9HD23	443 aa		13.88	□□□□□ -0.19
TPRKB-208	ENST00000485758	HEG1	Q9ULI3	1381 aa		13.87	□□□□□ -0.19
TPRKB-208	ENST00000485758	GNPAT	O15228	680 aa		13.87	□□□□□ -0.19
TPRKB-208	ENST00000485758	SSFA2	P28290	1259 aa		13.87	□□□□□ -0.19
TPRKB-208	ENST00000485758	RIPK4	P57078	832 aa		13.87	□□□□□ -0.19
TPRKB-208	ENST00000485758	LMOD3	Q0VAK6	560 aa		13.87	□□□□□ -0.19
TPRKB-208	ENST00000485758	AMIGO3	Q86WK7	504 aa		13.87	□□□□□ -0.19
TPRKB-208	ENST00000485758	COL23A1	Q86Y22	540 aa	Predicted RBP	13.87	□□□□□ -0.19
TPRKB-208	ENST00000485758	TAF7	Q15545	349 aa	Predicted RBP	13.86	□□□□□ -0.19
TPRKB-208	ENST00000485758	DNAJC10	Q8IXB1	793 aa		13.86	□□□□□ -0.19
TPRKB-208	ENST00000485758	PNISR	Q8TF01	805 aa	Known RBP	13.86	□□□□□ -0.19
TPRKB-208	ENST00000485758	FAM163A	Q96GL9	167 aa	Predicted RBP	13.86	□□□□□ -0.19
TPRKB-208	ENST00000485758	ZNF496	Q96IT1	587 aa	Predicted RBP	13.86	□□□□□ -0.19
TPRKB-208	ENST00000485758	RRP7A	Q9Y3A4	280 aa	Known RBP	13.86	□□□□□ -0.19
TPRKB-208	ENST00000485758	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.85	□□□□□ -0.19
TPRKB-208	ENST00000485758	KCNQ3	O43525	872 aa		13.85	□□□□□ -0.19
TPRKB-208	ENST00000485758	PHF14	O94880	888 aa		13.85	□□□□□ -0.19
TPRKB-208	ENST00000485758	SEC24B	O95487	1268 aa		13.85	□□□□□ -0.19
TPRKB-208	ENST00000485758	CRKL	P46109	303 aa	Known RBP	13.85	□□□□□ -0.19
TPRKB-208	ENST00000485758	FAM212A	Q96EL1	285 aa		13.85	□□□□□ -0.19
TPRKB-208	ENST00000485758	FMNL2	Q96PY5	1086 aa		13.85	□□□□□ -0.19
TPRKB-208	ENST00000485758	THUMPD2	Q9BTF0	503 aa	Known RBP	13.85	□□□□□ -0.19
TPRKB-208	ENST00000485758	CYP19A1	P11511	503 aa	Predicted RBP	13.84	□□□□□ -0.19
TPRKB-208	ENST00000485758	PTGER2	P43116	358 aa		13.84	□□□□□ -0.19
TPRKB-208	ENST00000485758	NEUROD2	Q15784	382 aa		13.84	□□□□□ -0.19
TPRKB-208	ENST00000485758	SMIM5	Q71RC9	77 aa		13.84	□□□□□ -0.19
TPRKB-208	ENST00000485758	RTCB	Q9Y3I0	505 aa	Known RBP	13.84	□□□□□ -0.19
TPRKB-208	ENST00000485758	RPS6KA4	O75676	772 aa		13.83	□□□□□ -0.2
TPRKB-208	ENST00000485758	INTS5	Q6P9B9	1019 aa	Known RBP	13.83	□□□□□ -0.2
TPRKB-208	ENST00000485758	CCDC87	Q9NVE4	849 aa		13.83	□□□□□ -0.2
TPRKB-208	ENST00000485758	APAF1	O14727	1248 aa		13.82	□□□□□ -0.2
TPRKB-208	ENST00000485758	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.82	□□□□□ -0.2
TPRKB-208	ENST00000485758	MIS18A	Q9NYP9	233 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms