RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 PIK3R2O00459 728 aa6.44□□□□□ -1.38
RTN4-213ENST00000485749 NR1H3Q13133 447 aa6.44□□□□□ -1.38
RTN4-213ENST00000485749 PKNOX2Q96KN3 472 aa6.44□□□□□ -1.38
RTN4-213ENST00000485749 PSMD1Q99460 953 aa6.44□□□□□ -1.38
RTN4-213ENST00000485749 TIMMDC1Q9NPL8 285 aa6.44□□□□□ -1.38
RTN4-213ENST00000485749 IGSF5Q9NSI5 407 aa6.44□□□□□ -1.38
RTN4-213ENST00000485749 ARID4BQ4LE39 1312 aaPredicted RBP6.44□□□□□ -1.38
RTN4-213ENST00000485749 WASLO00401 505 aaPredicted RBP6.43□□□□□ -1.38
RTN4-213ENST00000485749 F11P03951 625 aa6.43□□□□□ -1.38
RTN4-213ENST00000485749 FBXO45P0C2W1 286 aa6.43□□□□□ -1.38
RTN4-213ENST00000485749 ARID4AP29374 1257 aaPredicted RBP6.43□□□□□ -1.38
RTN4-213ENST00000485749 DBN1Q16643 649 aa6.43□□□□□ -1.38
RTN4-213ENST00000485749 CDCA8Q53HL2 280 aa6.43□□□□□ -1.38
RTN4-213ENST00000485749 NBPF10Q6P3W6 841 aaKnown RBP6.43□□□□□ -1.38
RTN4-213ENST00000485749 NBPF15Q8N660 670 aa6.43□□□□□ -1.38
RTN4-213ENST00000485749 GALNT6Q8NCL4 622 aa6.43□□□□□ -1.38
RTN4-213ENST00000485749 GTPBP3Q969Y2 492 aaKnown RBP6.43□□□□□ -1.38
RTN4-213ENST00000485749 NUCKS1Q9H1E3 243 aaKnown RBP6.43□□□□□ -1.38
RTN4-213ENST00000485749 CUEDC1Q9NWM3 386 aaPredicted RBP6.43□□□□□ -1.38
RTN4-213ENST00000485749 GPR25O00155 361 aa6.42□□□□□ -1.38
RTN4-213ENST00000485749 MYCP01106 439 aaPredicted RBP6.42□□□□□ -1.38
RTN4-213ENST00000485749 GNRH1P01148 92 aa6.42□□□□□ -1.38
RTN4-213ENST00000485749 POU4F2Q12837 409 aa6.42□□□□□ -1.38
RTN4-213ENST00000485749 LBRQ14739 615 aaKnown RBP6.42□□□□□ -1.38
RTN4-213ENST00000485749 PLEKHM2Q8IWE5 1019 aa6.42□□□□□ -1.38
RTN4-213ENST00000485749 CFHR5Q9BXR6 569 aa6.42□□□□□ -1.38
RTN4-213ENST00000485749 GRIP2Q9C0E4 1043 aa6.42□□□□□ -1.38
RTN4-213ENST00000485749 PPM1GO15355 546 aaPredicted RBP6.41□□□□□ -1.38
RTN4-213ENST00000485749 TICAM2Q86XR7 235 aa6.41□□□□□ -1.38
RTN4-213ENST00000485749 SIRT1Q96EB6 747 aa6.41□□□□□ -1.38
RTN4-213ENST00000485749 GDF2Q9UK05 429 aaPredicted RBP6.41□□□□□ -1.38
RTN4-213ENST00000485749 PCDHB11Q9Y5F2 797 aa6.41□□□□□ -1.38
RTN4-213ENST00000485749 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.41□□□□□ -1.38
RTN4-213ENST00000485749 A0A1B0GTH6 734 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 UNCXA6NJT0 531 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 FAM196BA6NMK8 535 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 SSFA2P28290 1259 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 ESCO1Q5FWF5 840 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 GNASQ5JWF2 1037 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 TMEM164Q5U3C3 297 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 PGBD3Q8N328 593 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 DCAF5Q96JK2 942 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 OXCT2Q9BYC2 517 aaPredicted RBP6.4□□□□□ -1.38
RTN4-213ENST00000485749 MKL2Q9ULH7 1088 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 ZMIZ1Q9ULJ6 1067 aa6.4□□□□□ -1.38
RTN4-213ENST00000485749 NOVA2Q9UNW9 492 aaKnown RBP6.4□□□□□ -1.38
RTN4-213ENST00000485749 OIP5O43482 229 aa6.39□□□□□ -1.39
RTN4-213ENST00000485749 LZTS3O60299 673 aaPredicted RBP6.39□□□□□ -1.39
RTN4-213ENST00000485749 PLA2G4EQ3MJ16 856 aa6.39□□□□□ -1.39
RTN4-213ENST00000485749 PHLDB3Q6NSJ2 640 aa6.39□□□□□ -1.39
RTN4-213ENST00000485749 DNAJC14Q6Y2X3 702 aaPredicted RBP6.39□□□□□ -1.39
RTN4-213ENST00000485749 FAM177A1Q8N128 213 aaPredicted RBP6.39□□□□□ -1.39
RTN4-213ENST00000485749 ACDQ96AP0 544 aa6.39□□□□□ -1.39
RTN4-213ENST00000485749 ESYT1Q9BSJ8 1104 aa6.39□□□□□ -1.39
RTN4-213ENST00000485749 ARHGEF10LQ9HCE6 1279 aa6.39□□□□□ -1.39
RTN4-213ENST00000485749 CNTNAP5Q8WYK1 1306 aa6.39□□□□□ -1.39
RTN4-213ENST00000485749 EFHC2Q5JST6 749 aa6.38□□□□□ -1.39
RTN4-213ENST00000485749 CLP1Q92989 425 aaKnown RBP6.38□□□□□ -1.39
RTN4-213ENST00000485749 CNKSR1Q969H4 720 aa6.38□□□□□ -1.39
RTN4-213ENST00000485749 ZSCAN10Q96SZ4 725 aaPredicted RBP6.38□□□□□ -1.39
RTN4-213ENST00000485749 USP17L3A6NCW0 530 aa6.37□□□□□ -1.39
RTN4-213ENST00000485749 USP17L4A6NCW7 530 aa6.37□□□□□ -1.39
RTN4-213ENST00000485749 TMEM214Q6NUQ4 689 aaKnown RBP6.37□□□□□ -1.39
RTN4-213ENST00000485749 USP17L2Q6R6M4 530 aa6.37□□□□□ -1.39
RTN4-213ENST00000485749 USP17L1Q7RTZ2 530 aa6.37□□□□□ -1.39
RTN4-213ENST00000485749 GOLGA6L1Q8N7Z2 621 aa6.37□□□□□ -1.39
RTN4-213ENST00000485749 SPOCK3Q9BQ16 436 aa6.37□□□□□ -1.39
RTN4-213ENST00000485749 CDCA7Q9BWT1 371 aaPredicted RBP6.37□□□□□ -1.39
RTN4-213ENST00000485749 OSBPL3Q9H4L5 887 aa6.37□□□□□ -1.39
RTN4-213ENST00000485749 STK32AQ8WU08 396 aa6.36□□□□□ -1.39
RTN4-213ENST00000485749 SOWAHDA6NJG2 315 aa6.35□□□□□ -1.39
RTN4-213ENST00000485749 USP17L5A8MUK1 530 aa6.35□□□□□ -1.39
RTN4-213ENST00000485749 ADAM23O75077 832 aa6.35□□□□□ -1.39
RTN4-213ENST00000485749 SKIP12755 728 aa6.35□□□□□ -1.39
RTN4-213ENST00000485749 CENPCQ03188 943 aa6.35□□□□□ -1.39
RTN4-213ENST00000485749 SWI5Q1ZZU3 235 aa6.35□□□□□ -1.39
RTN4-213ENST00000485749 LARP1Q6PKG0 1096 aaKnown RBP6.35□□□□□ -1.39
RTN4-213ENST00000485749 C1orf216Q8TAB5 229 aa6.35□□□□□ -1.39
RTN4-213ENST00000485749 FAM200AQ8TCP9 573 aa6.35□□□□□ -1.39
RTN4-213ENST00000485749 MRRFQ96E11 262 aaKnown RBP6.35□□□□□ -1.39
RTN4-213ENST00000485749 CWC22Q9HCG8 908 aaKnown RBP6.35□□□□□ -1.39
RTN4-213ENST00000485749 ATXN7L1Q9ULK2 861 aaPredicted RBP6.35□□□□□ -1.39
RTN4-213ENST00000485749 USP17L15C9J2P7 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L10C9JJH3 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L13C9JLJ4 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L12C9JPN9 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L11C9JVI0 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L21D6R901 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L18D6R9N7 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L22D6RA61 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L17D6RBQ6 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L19D6RCP7 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L20D6RJB6 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 ZNF16P17020 682 aaPredicted RBP6.34□□□□□ -1.39
RTN4-213ENST00000485749 SCTRP47872 440 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 FGD1P98174 961 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 FAM69CQ0P6D2 419 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP17L24Q0WX57 530 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 USP4Q13107 963 aa6.34□□□□□ -1.39
RTN4-213ENST00000485749 PTK7Q13308 1070 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms