RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 PTF1AQ7RTS3 328 aa20.59■□□□□ 0.89
ZNF248-206ENST00000485560 RBM42Q9BTD8 480 aaKnown RBP20.59■□□□□ 0.89
ZNF248-206ENST00000485560 RLBP1P12271 317 aa20.58■□□□□ 0.89
ZNF248-206ENST00000485560 ARHGAP45Q92619 1136 aa20.58■□□□□ 0.89
ZNF248-206ENST00000485560 CRBNQ96SW2 442 aa20.58■□□□□ 0.89
ZNF248-206ENST00000485560 RGS12O14924 1447 aa20.57■□□□□ 0.88
ZNF248-206ENST00000485560 ANXA1P04083 346 aa20.57■□□□□ 0.88
ZNF248-206ENST00000485560 DZIP1LQ8IYY4 767 aaKnown RBP20.57■□□□□ 0.88
ZNF248-206ENST00000485560 EXOC6Q8TAG9 804 aa20.57■□□□□ 0.88
ZNF248-206ENST00000485560 SLC4A9Q96Q91 983 aa20.57■□□□□ 0.88
ZNF248-206ENST00000485560 DBF4Q9UBU7 674 aaPredicted RBP20.57■□□□□ 0.88
ZNF248-206ENST00000485560 TJP1Q07157 1748 aa20.57■□□□□ 0.88
ZNF248-206ENST00000485560 VSIG10Q8N0Z9 540 aa20.56■□□□□ 0.88
ZNF248-206ENST00000485560 PDIA6Q15084 440 aa20.56■□□□□ 0.88
ZNF248-206ENST00000485560 PROSER3Q2NL68 480 aa20.56■□□□□ 0.88
ZNF248-206ENST00000485560 FTSJ3Q8IY81 847 aaKnown RBP20.56■□□□□ 0.88
ZNF248-206ENST00000485560 PHAXQ9H814 394 aaKnown RBP20.56■□□□□ 0.88
ZNF248-206ENST00000485560 PTPRCP08575 1304 aa20.55■□□□□ 0.88
ZNF248-206ENST00000485560 MS4A1P11836 297 aa20.55■□□□□ 0.88
ZNF248-206ENST00000485560 FLIIQ13045 1269 aa20.55■□□□□ 0.88
ZNF248-206ENST00000485560 FAM196AQ6ZSG2 479 aa20.55■□□□□ 0.88
ZNF248-206ENST00000485560 API5Q9BZZ5 524 aaKnown RBP20.55■□□□□ 0.88
ZNF248-206ENST00000485560 COG6Q9Y2V7 657 aa20.55■□□□□ 0.88
ZNF248-206ENST00000485560 PALLDQ8WX93 1383 aa20.55■□□□□ 0.88
ZNF248-206ENST00000485560 EP400Q96L91 3159 aa20.54■□□□□ 0.88
ZNF248-206ENST00000485560 ERICH6BQ5W0A0 696 aa20.54■□□□□ 0.88
ZNF248-206ENST00000485560 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
ZNF248-206ENST00000485560 SMARCC1Q92922 1105 aaPredicted RBP20.54■□□□□ 0.88
ZNF248-206ENST00000485560 DDX21Q9NR30 783 aaKnown RBP eCLIP20.54■□□□□ 0.88
ZNF248-206ENST00000485560 PIP4K2AP48426 406 aaPredicted RBP20.53■□□□□ 0.88
ZNF248-206ENST00000485560 TEX13AQ9BXU3 409 aaPredicted RBP20.53■□□□□ 0.88
ZNF248-206ENST00000485560 ABCC4O15439 1325 aa20.52■□□□□ 0.88
ZNF248-206ENST00000485560 FKBP5Q13451 457 aaPredicted RBP20.52■□□□□ 0.88
ZNF248-206ENST00000485560 TMEM57Q8N5G2 664 aa20.52■□□□□ 0.88
ZNF248-206ENST00000485560 HYPKQ9NX55 129 aa20.52■□□□□ 0.88
ZNF248-206ENST00000485560 CICQ96RK0 1608 aaPredicted RBP20.52■□□□□ 0.88
ZNF248-206ENST00000485560 LOC102724428A0A0B4J2F2 783 aa20.51■□□□□ 0.87
ZNF248-206ENST00000485560 MYL6BP14649 208 aa20.51■□□□□ 0.87
ZNF248-206ENST00000485560 SIK1P57059 783 aa20.51■□□□□ 0.87
ZNF248-206ENST00000485560 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
ZNF248-206ENST00000485560 A1BGP04217 495 aa20.5■□□□□ 0.87
ZNF248-206ENST00000485560 BCL11BQ9C0K0 894 aaPredicted RBP20.5■□□□□ 0.87
ZNF248-206ENST00000485560 LY75O60449 1722 aa20.5■□□□□ 0.87
ZNF248-206ENST00000485560 ERBB4Q15303 1308 aa20.5■□□□□ 0.87
ZNF248-206ENST00000485560 NBPF26B4DH59 902 aa20.5■□□□□ 0.87
ZNF248-206ENST00000485560 F6X3S4 739 aa20.5■□□□□ 0.87
ZNF248-206ENST00000485560 MVPQ14764 893 aaKnown RBP20.5■□□□□ 0.87
ZNF248-206ENST00000485560 NBPF14Q5TI25 921 aa20.5■□□□□ 0.87
ZNF248-206ENST00000485560 NBPF10Q6P3W6 841 aaKnown RBP20.5■□□□□ 0.87
ZNF248-206ENST00000485560 LRP10Q7Z4F1 713 aa20.5■□□□□ 0.87
ZNF248-206ENST00000485560 NBPF15Q8N660 670 aa20.5■□□□□ 0.87
ZNF248-206ENST00000485560 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
ZNF248-206ENST00000485560 ILDR2Q71H61 639 aa20.49■□□□□ 0.87
ZNF248-206ENST00000485560 STARD3NLO95772 234 aa20.48■□□□□ 0.87
ZNF248-206ENST00000485560 CYP19A1P11511 503 aaPredicted RBP20.48■□□□□ 0.87
ZNF248-206ENST00000485560 COL5A3P25940 1745 aaPredicted RBP20.48■□□□□ 0.87
ZNF248-206ENST00000485560 ITPRIPQ8IWB1 547 aa20.48■□□□□ 0.87
ZNF248-206ENST00000485560 N4BP2Q86UW6 1770 aaPredicted RBP20.48■□□□□ 0.87
ZNF248-206ENST00000485560 TRIM37O94972 964 aa20.47■□□□□ 0.87
ZNF248-206ENST00000485560 ITPK1Q13572 414 aa20.47■□□□□ 0.87
ZNF248-206ENST00000485560 MYH14Q7Z406 1995 aaKnown RBP20.47■□□□□ 0.87
ZNF248-206ENST00000485560 AIMP1Q12904 312 aaKnown RBP20.47■□□□□ 0.87
ZNF248-206ENST00000485560 XAGE3Q8WTP9 111 aa20.46■□□□□ 0.87
ZNF248-206ENST00000485560 INTS3Q68E01 1043 aaKnown RBP20.45■□□□□ 0.86
ZNF248-206ENST00000485560 SLC4A10Q6U841 1118 aa20.45■□□□□ 0.86
ZNF248-206ENST00000485560 COPS6Q7L5N1 327 aa20.45■□□□□ 0.86
ZNF248-206ENST00000485560 PPP4R2Q9NY27 417 aa20.45■□□□□ 0.86
ZNF248-206ENST00000485560 ADCY9O60503 1353 aa20.45■□□□□ 0.86
ZNF248-206ENST00000485560 TAF1LQ8IZX4 1826 aa20.45■□□□□ 0.86
ZNF248-206ENST00000485560 PI4KAP2A4QPH2 592 aa20.44■□□□□ 0.86
ZNF248-206ENST00000485560 PI4KAP1Q8N8J0 262 aa20.44■□□□□ 0.86
ZNF248-206ENST00000485560 DDX19BQ9UMR2 479 aa20.44■□□□□ 0.86
ZNF248-206ENST00000485560 RREB1Q92766 1687 aa20.44■□□□□ 0.86
ZNF248-206ENST00000485560 KCNQ4P56696 695 aa20.44■□□□□ 0.86
ZNF248-206ENST00000485560 ARFGEF2Q9Y6D5 1785 aa20.43■□□□□ 0.86
ZNF248-206ENST00000485560 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
ZNF248-206ENST00000485560 DDX58O95786 925 aaKnown RBP20.42■□□□□ 0.86
ZNF248-206ENST00000485560 KSR2Q6VAB6 950 aa20.42■□□□□ 0.86
ZNF248-206ENST00000485560 DNAAF4Q8WXU2 420 aa20.42■□□□□ 0.86
ZNF248-206ENST00000485560 ZBTB1Q9Y2K1 713 aa20.42■□□□□ 0.86
ZNF248-206ENST00000485560 MAP3K2Q9Y2U5 619 aa20.42■□□□□ 0.86
ZNF248-206ENST00000485560 CRKLP46109 303 aaKnown RBP20.41■□□□□ 0.86
ZNF248-206ENST00000485560 NUP188Q5SRE5 1749 aa20.41■□□□□ 0.86
ZNF248-206ENST00000485560 CCT4P50991 539 aaKnown RBP20.41■□□□□ 0.86
ZNF248-206ENST00000485560 INTS5Q6P9B9 1019 aaKnown RBP20.41■□□□□ 0.86
ZNF248-206ENST00000485560 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
ZNF248-206ENST00000485560 ZBTB7BO15156 539 aaPredicted RBP20.4■□□□□ 0.86
ZNF248-206ENST00000485560 TTLL7Q6ZT98 887 aa20.4■□□□□ 0.86
ZNF248-206ENST00000485560 ANKRD13DQ6ZTN6 518 aa20.4■□□□□ 0.86
ZNF248-206ENST00000485560 CCDC87Q9NVE4 849 aa20.4■□□□□ 0.86
ZNF248-206ENST00000485560 CCNL1Q9UK58 526 aaPredicted RBP20.4■□□□□ 0.86
ZNF248-206ENST00000485560 ZNF330Q9Y3S2 320 aaPredicted RBP20.4■□□□□ 0.86
ZNF248-206ENST00000485560 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.86
ZNF248-206ENST00000485560 B4GALNT3Q6L9W6 998 aa20.39■□□□□ 0.86
ZNF248-206ENST00000485560 RIC3Q7Z5B4 369 aa20.39■□□□□ 0.86
ZNF248-206ENST00000485560 ZBTB40Q9NUA8 1239 aa20.38■□□□□ 0.85
ZNF248-206ENST00000485560 IL6STP40189 918 aaPredicted RBP20.37■□□□□ 0.85
ZNF248-206ENST00000485560 AAMPQ13685 434 aa20.37■□□□□ 0.85
ZNF248-206ENST00000485560 BEND3Q5T5X7 828 aa20.37■□□□□ 0.85
ZNF248-206ENST00000485560 PLBD2Q8NHP8 589 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms