RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 TNRC6CQ9HCJ0 1690 aaKnown RBP18.73■□□□□ 0.59
NUP188-206ENST00000485158 PCNTO95613 3336 aa18.72■□□□□ 0.59
NUP188-206ENST00000485158 USPL1Q5W0Q7 1092 aa18.72■□□□□ 0.59
NUP188-206ENST00000485158 KLRG1Q96E93 195 aa18.72■□□□□ 0.59
NUP188-206ENST00000485158 LGR6Q9HBX8 967 aa18.72■□□□□ 0.59
NUP188-206ENST00000485158 AMER1Q5JTC6 1135 aaPredicted RBP18.71■□□□□ 0.59
NUP188-206ENST00000485158 VSIG10Q8N0Z9 540 aa18.71■□□□□ 0.59
NUP188-206ENST00000485158 NFIXQ14938 502 aa18.7■□□□□ 0.58
NUP188-206ENST00000485158 KNSTRNQ9Y448 316 aa18.7■□□□□ 0.58
NUP188-206ENST00000485158 COL15A1P39059 1388 aa18.69■□□□□ 0.58
NUP188-206ENST00000485158 DLEC1Q9Y238 1755 aa18.69■□□□□ 0.58
NUP188-206ENST00000485158 RNMTO43148 476 aaKnown RBP18.69■□□□□ 0.58
NUP188-206ENST00000485158 BCL2L12Q9HB09 334 aa18.69■□□□□ 0.58
NUP188-206ENST00000485158 RRAGCQ9HB90 399 aa18.69■□□□□ 0.58
NUP188-206ENST00000485158 AFDNP55196 1824 aaKnown RBP18.69■□□□□ 0.58
NUP188-206ENST00000485158 SLC39A6Q13433 755 aa18.67■□□□□ 0.58
NUP188-206ENST00000485158 SMC1BQ8NDV3 1235 aa18.67■□□□□ 0.58
NUP188-206ENST00000485158 ZBTB1Q9Y2K1 713 aa18.67■□□□□ 0.58
NUP188-206ENST00000485158 UBR2Q8IWV8 1755 aa18.66■□□□□ 0.58
NUP188-206ENST00000485158 LMNB1P20700 586 aa18.66■□□□□ 0.58
NUP188-206ENST00000485158 PRELPP51888 382 aa18.66■□□□□ 0.58
NUP188-206ENST00000485158 HTRA3P83110 453 aa18.66■□□□□ 0.58
NUP188-206ENST00000485158 GLTPD2A6NH11 291 aa18.65■□□□□ 0.58
NUP188-206ENST00000485158 SERPINB2P05120 415 aa18.65■□□□□ 0.58
NUP188-206ENST00000485158 VIRMAQ69YN4 1812 aaKnown RBP18.65■□□□□ 0.58
NUP188-206ENST00000485158 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.57
NUP188-206ENST00000485158 RASSF7Q02833 373 aa18.64■□□□□ 0.57
NUP188-206ENST00000485158 MTHFSDQ2M296 383 aaKnown RBP18.64■□□□□ 0.57
NUP188-206ENST00000485158 TTLL6Q8N841 843 aa18.64■□□□□ 0.57
NUP188-206ENST00000485158 VEGFAP15692 232 aaPredicted RBP18.63■□□□□ 0.57
NUP188-206ENST00000485158 PER1O15534 1290 aaPredicted RBP18.62■□□□□ 0.57
NUP188-206ENST00000485158 HMOX1P09601 288 aa18.62■□□□□ 0.57
NUP188-206ENST00000485158 CARMIL3Q8ND23 1372 aa18.61■□□□□ 0.57
NUP188-206ENST00000485158 H0YIN7 160 aa18.61■□□□□ 0.57
NUP188-206ENST00000485158 NFKBIEO00221 500 aa18.61■□□□□ 0.57
NUP188-206ENST00000485158 COL13A1Q5TAT6 717 aaPredicted RBP18.61■□□□□ 0.57
NUP188-206ENST00000485158 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
NUP188-206ENST00000485158 A0A087WZG4 1122 aa18.6■□□□□ 0.57
NUP188-206ENST00000485158 STARD3NLO95772 234 aa18.6■□□□□ 0.57
NUP188-206ENST00000485158 C2CD5Q86YS7 1000 aa18.6■□□□□ 0.57
NUP188-206ENST00000485158 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
NUP188-206ENST00000485158 POTECB2RU33 542 aa18.59■□□□□ 0.57
NUP188-206ENST00000485158 DIAPH1O60610 1272 aaKnown RBP18.59■□□□□ 0.57
NUP188-206ENST00000485158 TIAM2Q8IVF5 1701 aa18.58■□□□□ 0.57
NUP188-206ENST00000485158 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
NUP188-206ENST00000485158 CANXP27824 592 aaKnown RBP18.58■□□□□ 0.56
NUP188-206ENST00000485158 BRIP1Q9BX63 1249 aa18.58■□□□□ 0.56
NUP188-206ENST00000485158 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.56
NUP188-206ENST00000485158 ANKRD31Q8N7Z5 1873 aa18.57■□□□□ 0.56
NUP188-206ENST00000485158 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
NUP188-206ENST00000485158 SCN7AQ01118 1682 aa18.57■□□□□ 0.56
NUP188-206ENST00000485158 HEG1Q9ULI3 1381 aa18.56■□□□□ 0.56
NUP188-206ENST00000485158 LTBP3Q9NS15 1303 aa18.56■□□□□ 0.56
NUP188-206ENST00000485158 PDE6BP35913 854 aa18.56■□□□□ 0.56
NUP188-206ENST00000485158 TBC1D9BQ66K14 1250 aa18.56■□□□□ 0.56
NUP188-206ENST00000485158 ZNF790Q6PG37 636 aa18.56■□□□□ 0.56
NUP188-206ENST00000485158 TTC5Q8N0Z6 440 aa18.56■□□□□ 0.56
NUP188-206ENST00000485158 IL17REQ8NFR9 667 aa18.56■□□□□ 0.56
NUP188-206ENST00000485158 ZNF496Q96IT1 587 aaPredicted RBP18.56■□□□□ 0.56
NUP188-206ENST00000485158 CCDC88AQ3V6T2 1871 aa18.56■□□□□ 0.56
NUP188-206ENST00000485158 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
NUP188-206ENST00000485158 FER1L6Q2WGJ9 1857 aa18.55■□□□□ 0.56
NUP188-206ENST00000485158 IL6STP40189 918 aaPredicted RBP18.55■□□□□ 0.56
NUP188-206ENST00000485158 SIPA1L3O60292 1781 aaPredicted RBP18.55■□□□□ 0.56
NUP188-206ENST00000485158 DICER1Q9UPY3 1922 aaKnown RBP18.55■□□□□ 0.56
NUP188-206ENST00000485158 PRR5LQ6MZQ0 368 aa18.54■□□□□ 0.56
NUP188-206ENST00000485158 DPY19L2Q6NUT2 758 aa18.54■□□□□ 0.56
NUP188-206ENST00000485158 CEMIPQ8WUJ3 1361 aa18.54■□□□□ 0.56
NUP188-206ENST00000485158 GNAT3A8MTJ3 354 aa18.53■□□□□ 0.56
NUP188-206ENST00000485158 BICDL1Q6ZP65 573 aa18.53■□□□□ 0.56
NUP188-206ENST00000485158 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
NUP188-206ENST00000485158 COL11A2P13942 1736 aaPredicted RBP18.52■□□□□ 0.56
NUP188-206ENST00000485158 TEFQ10587 303 aa18.52■□□□□ 0.56
NUP188-206ENST00000485158 TBC1D2BQ9UPU7 963 aa18.51■□□□□ 0.55
NUP188-206ENST00000485158 C21orf2O43822 256 aa18.5■□□□□ 0.55
NUP188-206ENST00000485158 CAMTA2O94983 1202 aa18.5■□□□□ 0.55
NUP188-206ENST00000485158 ERFEQ4G0M1 354 aa18.5■□□□□ 0.55
NUP188-206ENST00000485158 STYK1Q6J9G0 422 aa18.5■□□□□ 0.55
NUP188-206ENST00000485158 ZNF622Q969S3 477 aaKnown RBP eCLIP18.5■□□□□ 0.55
NUP188-206ENST00000485158 FMNL2Q96PY5 1086 aa18.5■□□□□ 0.55
NUP188-206ENST00000485158 SRGNP10124 158 aa18.49■□□□□ 0.55
NUP188-206ENST00000485158 CC2D1BQ5T0F9 858 aaKnown RBP18.49■□□□□ 0.55
NUP188-206ENST00000485158 TNS4Q8IZW8 715 aa18.49■□□□□ 0.55
NUP188-206ENST00000485158 CNKSR1Q969H4 720 aa18.49■□□□□ 0.55
NUP188-206ENST00000485158 SETDB2Q96T68 719 aa18.49■□□□□ 0.55
NUP188-206ENST00000485158 TAOK3Q9H2K8 898 aa18.49■□□□□ 0.55
NUP188-206ENST00000485158 HSPA1AP0DMV8 641 aaKnown RBP18.48■□□□□ 0.55
NUP188-206ENST00000485158 HSPA1BP0DMV9 641 aaKnown RBP18.48■□□□□ 0.55
NUP188-206ENST00000485158 SOGA3Q5TF21 947 aa18.48■□□□□ 0.55
NUP188-206ENST00000485158 CNBD1Q8NA66 436 aa18.48■□□□□ 0.55
NUP188-206ENST00000485158 BCORQ6W2J9 1755 aa18.47■□□□□ 0.55
NUP188-206ENST00000485158 ARFGEF2Q9Y6D5 1785 aa18.47■□□□□ 0.55
NUP188-206ENST00000485158 RGL2O15211 777 aa18.47■□□□□ 0.55
NUP188-206ENST00000485158 A1BGP04217 495 aa18.47■□□□□ 0.55
NUP188-206ENST00000485158 CLEC4GQ6UXB4 293 aa18.47■□□□□ 0.55
NUP188-206ENST00000485158 C7orf43Q8WVR3 580 aa18.47■□□□□ 0.55
NUP188-206ENST00000485158 CREBZFQ9NS37 354 aa18.47■□□□□ 0.55
NUP188-206ENST00000485158 SLX4Q8IY92 1834 aa18.46■□□□□ 0.55
NUP188-206ENST00000485158 KLRG2A4D1S0 409 aaPredicted RBP18.46■□□□□ 0.55
NUP188-206ENST00000485158 CHADLQ6NUI6 762 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms