RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 NRXN2Q9P2S2 1712 aa15.39■□□□□ 0.05
SCFD1-206ENST00000484733 ZBTB1Q9Y2K1 713 aa15.39■□□□□ 0.05
SCFD1-206ENST00000484733 FCHSD2O94868 740 aa15.39■□□□□ 0.05
SCFD1-206ENST00000484733 TEFQ10587 303 aa15.39■□□□□ 0.05
SCFD1-206ENST00000484733 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
SCFD1-206ENST00000484733 TEX13AQ9BXU3 409 aaPredicted RBP15.39■□□□□ 0.05
SCFD1-206ENST00000484733 PIM2Q9P1W9 311 aa15.39■□□□□ 0.05
SCFD1-206ENST00000484733 CEMIPQ8WUJ3 1361 aa15.39■□□□□ 0.05
SCFD1-206ENST00000484733 STARD3NLO95772 234 aa15.38■□□□□ 0.05
SCFD1-206ENST00000484733 RSPH6AQ9H0K4 717 aa15.38■□□□□ 0.05
SCFD1-206ENST00000484733 NUDCQ9Y266 331 aa15.38■□□□□ 0.05
SCFD1-206ENST00000484733 HEG1Q9ULI3 1381 aa15.38■□□□□ 0.05
SCFD1-206ENST00000484733 ZNF790Q6PG37 636 aa15.38■□□□□ 0.05
SCFD1-206ENST00000484733 A0A087WZG4 1122 aa15.37■□□□□ 0.05
SCFD1-206ENST00000484733 BCL2L12Q9HB09 334 aa15.37■□□□□ 0.05
SCFD1-206ENST00000484733 AFDNP55196 1824 aaKnown RBP15.37■□□□□ 0.05
SCFD1-206ENST00000484733 PPP2R1AP30153 589 aa15.37■□□□□ 0.05
SCFD1-206ENST00000484733 EIF5P55010 431 aaKnown RBP15.37■□□□□ 0.05
SCFD1-206ENST00000484733 ARHGAP27Q6ZUM4 889 aa15.37■□□□□ 0.05
SCFD1-206ENST00000484733 CNGB1Q14028 1251 aaPredicted RBP15.36■□□□□ 0.05
SCFD1-206ENST00000484733 NFIXQ14938 502 aa15.36■□□□□ 0.05
SCFD1-206ENST00000484733 ZNF496Q96IT1 587 aaPredicted RBP15.36■□□□□ 0.05
SCFD1-206ENST00000484733 PRKAR2BP31323 418 aa15.35■□□□□ 0.05
SCFD1-206ENST00000484733 DALRD3Q5D0E6 543 aaKnown RBP15.35■□□□□ 0.05
SCFD1-206ENST00000484733 PHACTR3Q96KR7 559 aa15.35■□□□□ 0.05
SCFD1-206ENST00000484733 CANXP27824 592 aaKnown RBP15.34■□□□□ 0.05
SCFD1-206ENST00000484733 FMNL2Q96PY5 1086 aa15.34■□□□□ 0.05
SCFD1-206ENST00000484733 KIF3CO14782 793 aa15.34■□□□□ 0.05
SCFD1-206ENST00000484733 ZNF526Q8TF50 670 aaPredicted RBP15.34■□□□□ 0.05
SCFD1-206ENST00000484733 GOLGB1Q14789 3259 aaKnown RBP15.34■□□□□ 0.05
SCFD1-206ENST00000484733 SERPINB2P05120 415 aa15.33■□□□□ 0.05
SCFD1-206ENST00000484733 HTATSF1O43719 755 aaKnown RBP15.33■□□□□ 0.04
SCFD1-206ENST00000484733 CHRNA5P30532 468 aa15.33■□□□□ 0.04
SCFD1-206ENST00000484733 IL6STP40189 918 aaPredicted RBP15.33■□□□□ 0.04
SCFD1-206ENST00000484733 DLEC1Q9Y238 1755 aa15.33■□□□□ 0.04
SCFD1-206ENST00000484733 SCN7AQ01118 1682 aa15.32■□□□□ 0.04
SCFD1-206ENST00000484733 BTBD11A6QL63 1104 aa15.32■□□□□ 0.04
SCFD1-206ENST00000484733 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
SCFD1-206ENST00000484733 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.048e-6■■□□□ 11.7
SCFD1-206ENST00000484733 C9orf131Q5VYM1 1079 aa15.31■□□□□ 0.04
SCFD1-206ENST00000484733 HSPA6P17066 643 aa15.3■□□□□ 0.04
SCFD1-206ENST00000484733 PDZRN3Q9UPQ7 1066 aa15.3■□□□□ 0.04
SCFD1-206ENST00000484733 RTF1Q92541 710 aaKnown RBP15.29■□□□□ 0.04
SCFD1-206ENST00000484733 SBF1O95248 1867 aa15.29■□□□□ 0.04
SCFD1-206ENST00000484733 KCNQ3O43525 872 aa15.29■□□□□ 0.04
SCFD1-206ENST00000484733 A1BGP04217 495 aa15.28■□□□□ 0.04
SCFD1-206ENST00000484733 TBC1D9BQ66K14 1250 aa15.28■□□□□ 0.04
SCFD1-206ENST00000484733 BCORQ6W2J9 1755 aa15.28■□□□□ 0.04
SCFD1-206ENST00000484733 CAMTA2O94983 1202 aa15.27■□□□□ 0.04
SCFD1-206ENST00000484733 H0YIN7 160 aa15.27■□□□□ 0.03
SCFD1-206ENST00000484733 TOMM70O94826 608 aa15.27■□□□□ 0.03
SCFD1-206ENST00000484733 SNRPA1P09661 255 aaKnown RBP15.27■□□□□ 0.03
SCFD1-206ENST00000484733 C2CD5Q86YS7 1000 aa15.27■□□□□ 0.03
SCFD1-206ENST00000484733 TTLL6Q8N841 843 aa15.27■□□□□ 0.03
SCFD1-206ENST00000484733 BRIP1Q9BX63 1249 aa15.27■□□□□ 0.03
SCFD1-206ENST00000484733 TBC1D2BQ9UPU7 963 aa15.27■□□□□ 0.03
SCFD1-206ENST00000484733 ZC3H4Q9UPT8 1303 aaKnown RBP15.27■□□□□ 0.03
SCFD1-206ENST00000484733 CARMIL3Q8ND23 1372 aa15.27■□□□□ 0.03
SCFD1-206ENST00000484733 ANKRD31Q8N7Z5 1873 aa15.26■□□□□ 0.03
SCFD1-206ENST00000484733 RGL2O15211 777 aa15.26■□□□□ 0.03
SCFD1-206ENST00000484733 MCM10Q7L590 875 aa15.26■□□□□ 0.03
SCFD1-206ENST00000484733 USP16Q9Y5T5 823 aa15.26■□□□□ 0.03
SCFD1-206ENST00000484733 BICDL1Q6ZP65 573 aa15.26■□□□□ 0.03
SCFD1-206ENST00000484733 NPM2Q86SE8 214 aaKnown RBP15.26■□□□□ 0.03
SCFD1-206ENST00000484733 RNF181Q9P0P0 153 aa15.26■□□□□ 0.03
SCFD1-206ENST00000484733 PDE6BP35913 854 aa15.25■□□□□ 0.03
SCFD1-206ENST00000484733 TAF7Q15545 349 aaPredicted RBP15.25■□□□□ 0.03
SCFD1-206ENST00000484733 PRR5LQ6MZQ0 368 aa15.25■□□□□ 0.03
SCFD1-206ENST00000484733 NMRK2Q9NPI5 230 aa15.25■□□□□ 0.03
SCFD1-206ENST00000484733 KDM2BQ8NHM5 1336 aa15.25■□□□□ 0.03
SCFD1-206ENST00000484733 CLEC4GQ6UXB4 293 aa15.24■□□□□ 0.03
SCFD1-206ENST00000484733 DZIP3Q86Y13 1208 aaKnown RBP15.24■□□□□ 0.03
SCFD1-206ENST00000484733 RBM46Q8TBY0 533 aaKnown RBP15.24■□□□□ 0.03
SCFD1-206ENST00000484733 SETDB2Q96T68 719 aa15.24■□□□□ 0.03
SCFD1-206ENST00000484733 ZNF330Q9Y3S2 320 aaPredicted RBP15.23■□□□□ 0.03
SCFD1-206ENST00000484733 DCTN1Q14203 1278 aa15.23■□□□□ 0.03
SCFD1-206ENST00000484733 PLEKHF1Q96S99 279 aa15.23■□□□□ 0.03
SCFD1-206ENST00000484733 TNRC6CQ9HCJ0 1690 aaKnown RBP15.23■□□□□ 0.03
SCFD1-206ENST00000484733 NEFMP07197 916 aa15.22■□□□□ 0.03
SCFD1-206ENST00000484733 LMNB1P20700 586 aa15.22■□□□□ 0.03
SCFD1-206ENST00000484733 PNISRQ8TF01 805 aaKnown RBP15.22■□□□□ 0.03
SCFD1-206ENST00000484733 DLG5Q8TDM6 1919 aa15.22■□□□□ 0.03
SCFD1-206ENST00000484733 PRAMEF22A3QJZ6 481 aa15.22■□□□□ 0.03
SCFD1-206ENST00000484733 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
SCFD1-206ENST00000484733 APLP1P51693 650 aa15.21■□□□□ 0.03
SCFD1-206ENST00000484733 RASSF7Q02833 373 aa15.21■□□□□ 0.03
SCFD1-206ENST00000484733 COL11A2P13942 1736 aaPredicted RBP15.21■□□□□ 0.03
SCFD1-206ENST00000484733 LAMB4A4D0S4 1761 aa15.21■□□□□ 0.03
SCFD1-206ENST00000484733 KDM3BQ7LBC6 1761 aa15.21■□□□□ 0.03
SCFD1-206ENST00000484733 CNBD1Q8NA66 436 aa15.21■□□□□ 0.02
SCFD1-206ENST00000484733 ZNF652Q9Y2D9 606 aa15.21■□□□□ 0.02
SCFD1-206ENST00000484733 PRELPP51888 382 aa15.2■□□□□ 0.02
SCFD1-206ENST00000484733 ST5P78524 1137 aa15.2■□□□□ 0.02
SCFD1-206ENST00000484733 FSTL1Q12841 308 aa15.2■□□□□ 0.02
SCFD1-206ENST00000484733 STYK1Q6J9G0 422 aa15.2■□□□□ 0.02
SCFD1-206ENST00000484733 ARFGEF2Q9Y6D5 1785 aa15.2■□□□□ 0.02
SCFD1-206ENST00000484733 NBPF26B4DH59 902 aa15.2■□□□□ 0.02
SCFD1-206ENST00000484733 NFKBIEO00221 500 aa15.2■□□□□ 0.02
SCFD1-206ENST00000484733 NFE2L2Q16236 605 aa15.2■□□□□ 0.02
SCFD1-206ENST00000484733 NBPF10Q6P3W6 841 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms