RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 STARD3NLO95772 234 aa37.92■■■■□ 3.66
HLA-C-207ENST00000484378 ZNF496Q96IT1 587 aaPredicted RBP37.92■■■■□ 3.66
HLA-C-207ENST00000484378 ATP10DQ9P241 1426 aa37.92■■■■□ 3.66
HLA-C-207ENST00000484378 GIGYF1O75420 1035 aaPredicted RBP37.91■■■■□ 3.66
HLA-C-207ENST00000484378 HEG1Q9ULI3 1381 aa37.91■■■■□ 3.66
HLA-C-207ENST00000484378 DPEP1P16444 411 aa37.9■■■■□ 3.66
HLA-C-207ENST00000484378 BCS1LQ9Y276 419 aa37.9■■■■□ 3.66
HLA-C-207ENST00000484378 FCHSD2O94868 740 aa37.89■■■■□ 3.66
HLA-C-207ENST00000484378 CANXP27824 592 aaKnown RBP37.89■■■■□ 3.66
HLA-C-207ENST00000484378 NARFQ9UHQ1 456 aa37.89■■■■□ 3.66
HLA-C-207ENST00000484378 ADCY9O60503 1353 aa37.87■■■■□ 3.65
HLA-C-207ENST00000484378 POLRMTO00411 1230 aaKnown RBP37.86■■■■□ 3.65
HLA-C-207ENST00000484378 TM4SF1P30408 202 aa37.86■■■■□ 3.65
HLA-C-207ENST00000484378 C1QTNF8P60827 252 aa37.86■■■■□ 3.65
HLA-C-207ENST00000484378 RTF1Q92541 710 aaKnown RBP37.86■■■■□ 3.65
HLA-C-207ENST00000484378 FMNL2Q96PY5 1086 aa37.86■■■■□ 3.65
HLA-C-207ENST00000484378 BRCA1P38398 1863 aaKnown RBP37.86■■■■□ 3.65
HLA-C-207ENST00000484378 BTBD11A6QL63 1104 aa37.85■■■■□ 3.65
HLA-C-207ENST00000484378 TEX13AQ9BXU3 409 aaPredicted RBP37.85■■■■□ 3.65
HLA-C-207ENST00000484378 NFIXQ14938 502 aa37.81■■■■□ 3.64
HLA-C-207ENST00000484378 MCM10Q7L590 875 aa37.81■■■■□ 3.64
HLA-C-207ENST00000484378 EIF5P55010 431 aaKnown RBP37.8■■■■□ 3.64
HLA-C-207ENST00000484378 A0A087WZG4 1122 aa37.79■■■■□ 3.64
HLA-C-207ENST00000484378 KCNA3P22001 575 aa37.79■■■■□ 3.64
HLA-C-207ENST00000484378 BCL2L12Q9HB09 334 aa37.79■■■■□ 3.64
HLA-C-207ENST00000484378 KCNQ3O43525 872 aa37.78■■■■□ 3.64
HLA-C-207ENST00000484378 GPBP1L1Q9HC44 474 aaPredicted RBP37.78■■■■□ 3.64
HLA-C-207ENST00000484378 ZNF330Q9Y3S2 320 aaPredicted RBP37.78■■■■□ 3.64
HLA-C-207ENST00000484378 ZNF526Q8TF50 670 aaPredicted RBP37.77■■■■□ 3.64
HLA-C-207ENST00000484378 PIM2Q9P1W9 311 aa37.77■■■■□ 3.64
HLA-C-207ENST00000484378 AFDNP55196 1824 aaKnown RBP37.77■■■■□ 3.64
HLA-C-207ENST00000484378 NEFMP07197 916 aa37.75■■■■□ 3.63
HLA-C-207ENST00000484378 ARHGAP27Q6ZUM4 889 aa37.75■■■■□ 3.63
HLA-C-207ENST00000484378 SCN7AQ01118 1682 aa37.75■■■■□ 3.63
HLA-C-207ENST00000484378 NRXN2Q9P2S2 1712 aa37.75■■■■□ 3.63
HLA-C-207ENST00000484378 ARFGEF1Q9Y6D6 1849 aa37.75■■■■□ 3.63
HLA-C-207ENST00000484378 HTATSF1O43719 755 aaKnown RBP37.74■■■■□ 3.63
HLA-C-207ENST00000484378 CHRNA5P30532 468 aa37.74■■■■□ 3.63
HLA-C-207ENST00000484378 DCTN1Q14203 1278 aa37.74■■■■□ 3.63
HLA-C-207ENST00000484378 IL6STP40189 918 aaPredicted RBP37.73■■■■□ 3.63
HLA-C-207ENST00000484378 DALRD3Q5D0E6 543 aaKnown RBP37.72■■■■□ 3.63
HLA-C-207ENST00000484378 NPM2Q86SE8 214 aaKnown RBP37.72■■■■□ 3.63
HLA-C-207ENST00000484378 SENP3-EIF4A1A0A087X0R7 540 aa37.71■■■■□ 3.63
HLA-C-207ENST00000484378 A1BGP04217 495 aa37.71■■■■□ 3.63
HLA-C-207ENST00000484378 SERPINB2P05120 415 aa37.71■■■■□ 3.63
HLA-C-207ENST00000484378 BICDL1Q6ZP65 573 aa37.7■■■■□ 3.63
HLA-C-207ENST00000484378 TBC1D2BQ9UPU7 963 aa37.69■■■■□ 3.62
HLA-C-207ENST00000484378 DLG5Q8TDM6 1919 aa37.65■■■■□ 3.62
HLA-C-207ENST00000484378 SNRPA1P09661 255 aaKnown RBP37.65■■■■□ 3.62
HLA-C-207ENST00000484378 TBC1D9BQ66K14 1250 aa37.65■■■■□ 3.62
HLA-C-207ENST00000484378 USP16Q9Y5T5 823 aa37.65■■■■□ 3.62
HLA-C-207ENST00000484378 PRAMEF22A3QJZ6 481 aa37.64■■■■□ 3.62
HLA-C-207ENST00000484378 TAF7Q15545 349 aaPredicted RBP37.63■■■■□ 3.61
HLA-C-207ENST00000484378 CARMIL3Q8ND23 1372 aa37.63■■■■□ 3.61
HLA-C-207ENST00000484378 PLEKHF1Q96S99 279 aa37.62■■■■□ 3.61
HLA-C-207ENST00000484378 BCORQ6W2J9 1755 aa37.61■■■■□ 3.61
HLA-C-207ENST00000484378 DLEC1Q9Y238 1755 aa37.61■■■■□ 3.61
HLA-C-207ENST00000484378 RALBP1Q15311 655 aa37.61■■■■□ 3.61
HLA-C-207ENST00000484378 PNNQ9H307 717 aaKnown RBP37.61■■■■□ 3.61
HLA-C-207ENST00000484378 MAPK8IP3Q9UPT6 1336 aa37.61■■■■□ 3.61
HLA-C-207ENST00000484378 PIP4K2AP48426 406 aaPredicted RBP37.6■■■■□ 3.61
HLA-C-207ENST00000484378 DZIP3Q86Y13 1208 aaKnown RBP37.6■■■■□ 3.61
HLA-C-207ENST00000484378 CAMTA2O94983 1202 aa37.59■■■■□ 3.61
HLA-C-207ENST00000484378 NFE2L2Q16236 605 aa37.59■■■■□ 3.61
HLA-C-207ENST00000484378 DDX10Q13206 875 aaKnown RBP37.57■■■■□ 3.6
HLA-C-207ENST00000484378 C9orf131Q5VYM1 1079 aa37.57■■■■□ 3.6
HLA-C-207ENST00000484378 C2CD5Q86YS7 1000 aa37.57■■■■□ 3.6
HLA-C-207ENST00000484378 MIS18AQ9NYP9 233 aa37.57■■■■□ 3.6
HLA-C-207ENST00000484378 H0YIN7 160 aa37.55■■■■□ 3.6
HLA-C-207ENST00000484378 SETDB2Q96T68 719 aa37.55■■■■□ 3.6
HLA-C-207ENST00000484378 LAMB4A4D0S4 1761 aa37.55■■■■□ 3.6
HLA-C-207ENST00000484378 PNISRQ8TF01 805 aaKnown RBP37.54■■■■□ 3.6
HLA-C-207ENST00000484378 KDM3BQ7LBC6 1761 aa37.54■■■■□ 3.6
HLA-C-207ENST00000484378 ANKRD31Q8N7Z5 1873 aa37.53■■■■□ 3.6
HLA-C-207ENST00000484378 NPHP1O15259 732 aa37.52■■■■□ 3.6
HLA-C-207ENST00000484378 PRR5LQ6MZQ0 368 aa37.52■■■■□ 3.6
HLA-C-207ENST00000484378 TTLL6Q8N841 843 aa37.52■■■■□ 3.6
HLA-C-207ENST00000484378 THUMPD2Q9BTF0 503 aaKnown RBP37.51■■■■□ 3.6
HLA-C-207ENST00000484378 CNBD1Q8NA66 436 aa37.5■■■■□ 3.59
HLA-C-207ENST00000484378 BRIP1Q9BX63 1249 aa37.5■■■■□ 3.59
HLA-C-207ENST00000484378 RNF181Q9P0P0 153 aa37.5■■■■□ 3.59
HLA-C-207ENST00000484378 NBPF26B4DH59 902 aa37.49■■■■□ 3.59
HLA-C-207ENST00000484378 KIF3CO14782 793 aa37.49■■■■□ 3.59
HLA-C-207ENST00000484378 PDE6BP35913 854 aa37.49■■■■□ 3.59
HLA-C-207ENST00000484378 NBPF10Q6P3W6 841 aaKnown RBP37.49■■■■□ 3.59
HLA-C-207ENST00000484378 CCDC24Q8N4L8 307 aa37.49■■■■□ 3.59
HLA-C-207ENST00000484378 NBPF15Q8N660 670 aa37.49■■■■□ 3.59
HLA-C-207ENST00000484378 ZNF652Q9Y2D9 606 aa37.49■■■■□ 3.59
HLA-C-207ENST00000484378 PDZRN3Q9UPQ7 1066 aa37.48■■■■□ 3.59
HLA-C-207ENST00000484378 MYBBP1AQ9BQG0 1328 aaKnown RBP37.47■■■■□ 3.59
HLA-C-207ENST00000484378 COL11A2P13942 1736 aaPredicted RBP37.47■■■■□ 3.59
HLA-C-207ENST00000484378 CEP350Q5VT06 3117 aa37.46■■■■□ 3.59
HLA-C-207ENST00000484378 CLEC4GQ6UXB4 293 aa37.46■■■■□ 3.59
HLA-C-207ENST00000484378 ST5P78524 1137 aa37.45■■■■□ 3.59
HLA-C-207ENST00000484378 RASSF7Q02833 373 aa37.45■■■■□ 3.59
HLA-C-207ENST00000484378 SBF1O95248 1867 aa37.45■■■■□ 3.59
HLA-C-207ENST00000484378 ZNF622Q969S3 477 aaKnown RBP eCLIP37.44■■■■□ 3.58
HLA-C-207ENST00000484378 EIF4A1P60842 406 aaKnown RBP37.42■■■■□ 3.58
HLA-C-207ENST00000484378 NBPF5PQ86XG9 351 aaPredicted RBP37.41■■■■□ 3.58
HLA-C-207ENST00000484378 NMRK2Q9NPI5 230 aa37.41■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms